EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000008865 (Gene tree)
Gene ID: 106905898
Gene Symbol: crnkl1
Alias: -
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 11130 bases
Position: chrKQ553215.1:79944-91073
Accession: 106905898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000007261	Suf	PF05843.14	4.7e-12	1	1
ENSPMEP00000007261	HAT	PF02184.16	1.9e-36	1	2
ENSPMEP00000007261	HAT	PF02184.16	1.9e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000004427	-	6989	XM_014970943	ENSPMEP00000007261	736 (aa)	XP_014826429	-

Gene Model

Click here to download ENSPMEG00000008865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000008865's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000008865	crnkl1	93	84.593	ENSG00000101343	CRNKL1	97	86.336	Homo_sapiens
ENSPMEG00000008865	crnkl1	96	92.351	ENSAPOG00000009705	crnkl1	97	93.592	Acanthochromis_polyacanthus
ENSPMEG00000008865	crnkl1	93	85.212	ENSAMEG00000000270	CRNKL1	80	87.237	Ailuropoda_melanoleuca
ENSPMEG00000008865	crnkl1	98	87.950	ENSACIG00000015267	crnkl1	89	92.804	Amphilophus_citrinellus
ENSPMEG00000008865	crnkl1	96	92.493	ENSAOCG00000021964	crnkl1	89	94.933	Amphiprion_ocellaris
ENSPMEG00000008865	crnkl1	96	92.068	ENSAPEG00000015041	crnkl1	89	95.202	Amphiprion_percula
ENSPMEG00000008865	crnkl1	97	89.185	ENSATEG00000001068	crnkl1	88	92.975	Anabas_testudineus
ENSPMEG00000008865	crnkl1	91	83.976	ENSAPLG00000013105	CRNKL1	97	84.708	Anas_platyrhynchos
ENSPMEG00000008865	crnkl1	93	85.255	ENSACAG00000005284	CRNKL1	98	86.736	Anolis_carolinensis
ENSPMEG00000008865	crnkl1	86	86.349	ENSANAG00000024889	CRNKL1	99	86.349	Aotus_nancymaae
ENSPMEG00000008865	crnkl1	97	89.444	ENSACLG00000010813	crnkl1	89	94.311	Astatotilapia_calliptera
ENSPMEG00000008865	crnkl1	90	91.429	ENSAMXG00000018334	crnkl1	90	91.454	Astyanax_mexicanus
ENSPMEG00000008865	crnkl1	93	85.320	ENSBTAG00000008472	CRNKL1	96	87.237	Bos_taurus
ENSPMEG00000008865	crnkl1	87	63.608	WBGene00019762	M03F8.3	88	63.843	Caenorhabditis_elegans
ENSPMEG00000008865	crnkl1	94	84.515	ENSCJAG00000005393	CRNKL1	97	86.486	Callithrix_jacchus
ENSPMEG00000008865	crnkl1	93	85.212	ENSCAFG00000005333	CRNKL1	91	87.237	Canis_familiaris
ENSPMEG00000008865	crnkl1	93	85.320	ENSCAFG00020027488	CRNKL1	97	87.237	Canis_lupus_dingo
ENSPMEG00000008865	crnkl1	93	84.448	ENSCHIG00000013171	CRNKL1	96	86.336	Capra_hircus
ENSPMEG00000008865	crnkl1	94	84.081	ENSTSYG00000004197	CRNKL1	97	86.336	Carlito_syrichta
ENSPMEG00000008865	crnkl1	87	82.986	ENSCAPG00000010501	CRNKL1	96	85.142	Cavia_aperea
ENSPMEG00000008865	crnkl1	93	84.302	ENSCPOG00000004418	CRNKL1	97	86.186	Cavia_porcellus
ENSPMEG00000008865	crnkl1	94	84.370	ENSCCAG00000027037	CRNKL1	97	86.336	Cebus_capucinus
ENSPMEG00000008865	crnkl1	93	84.448	ENSCATG00000034247	CRNKL1	97	86.186	Cercocebus_atys
ENSPMEG00000008865	crnkl1	93	84.593	ENSCLAG00000013859	CRNKL1	97	86.486	Chinchilla_lanigera
ENSPMEG00000008865	crnkl1	93	84.448	ENSCSAG00000011434	CRNKL1	97	86.186	Chlorocebus_sabaeus
ENSPMEG00000008865	crnkl1	93	84.480	ENSCHOG00000006371	CRNKL1	81	86.486	Choloepus_hoffmanni
ENSPMEG00000008865	crnkl1	92	86.944	ENSCPBG00000023501	CRNKL1	98	87.034	Chrysemys_picta_bellii
ENSPMEG00000008865	crnkl1	90	68.675	ENSCING00000002709	-	97	68.675	Ciona_intestinalis
ENSPMEG00000008865	crnkl1	93	84.448	ENSCANG00000038789	CRNKL1	97	86.186	Colobus_angolensis_palliatus
ENSPMEG00000008865	crnkl1	94	84.493	ENSCGRG00001000687	-	97	86.486	Cricetulus_griseus_chok1gshd
ENSPMEG00000008865	crnkl1	94	84.493	ENSCGRG00001001115	-	97	86.486	Cricetulus_griseus_chok1gshd
ENSPMEG00000008865	crnkl1	94	84.493	ENSCGRG00000007854	Crnkl1	97	86.486	Cricetulus_griseus_crigri
ENSPMEG00000008865	crnkl1	97	88.611	ENSCSEG00000005594	crnkl1	85	93.294	Cynoglossus_semilaevis
ENSPMEG00000008865	crnkl1	91	96.856	ENSCVAG00000015172	crnkl1	99	91.463	Cyprinodon_variegatus
ENSPMEG00000008865	crnkl1	97	86.732	ENSDARG00000007901	crnkl1	89	90.462	Danio_rerio
ENSPMEG00000008865	crnkl1	92	84.738	ENSDNOG00000016226	CRNKL1	92	86.937	Dasypus_novemcinctus
ENSPMEG00000008865	crnkl1	91	79.372	ENSDORG00000023724	-	99	79.372	Dipodomys_ordii
ENSPMEG00000008865	crnkl1	93	83.285	ENSDORG00000000394	-	97	85.119	Dipodomys_ordii
ENSPMEG00000008865	crnkl1	91	78.689	ENSDORG00000030174	-	99	78.689	Dipodomys_ordii
ENSPMEG00000008865	crnkl1	90	69.670	FBgn0000377	crn	95	69.670	Drosophila_melanogaster
ENSPMEG00000008865	crnkl1	92	74.963	ENSETEG00000003711	CRNKL1	81	75.826	Echinops_telfairi
ENSPMEG00000008865	crnkl1	93	62.124	ENSEBUG00000013461	crnkl1	94	57.377	Eptatretus_burgeri
ENSPMEG00000008865	crnkl1	92	86.029	ENSEASG00005002072	CRNKL1	97	87.237	Equus_asinus_asinus
ENSPMEG00000008865	crnkl1	92	86.029	ENSECAG00000022215	CRNKL1	97	87.237	Equus_caballus
ENSPMEG00000008865	crnkl1	93	82.284	ENSEEUG00000000413	CRNKL1	90	84.234	Erinaceus_europaeus
ENSPMEG00000008865	crnkl1	91	89.355	ENSELUG00000015424	crnkl1	95	88.972	Esox_lucius
ENSPMEG00000008865	crnkl1	93	85.320	ENSFCAG00000000714	CRNKL1	97	87.237	Felis_catus
ENSPMEG00000008865	crnkl1	89	86.524	ENSFALG00000004611	CRNKL1	97	86.524	Ficedula_albicollis
ENSPMEG00000008865	crnkl1	93	84.884	ENSFDAG00000000604	CRNKL1	97	86.787	Fukomys_damarensis
ENSPMEG00000008865	crnkl1	99	87.795	ENSFHEG00000013163	crnkl1	96	91.881	Fundulus_heteroclitus
ENSPMEG00000008865	crnkl1	91	90.419	ENSGMOG00000007609	crnkl1	93	90.179	Gadus_morhua
ENSPMEG00000008865	crnkl1	91	87.106	ENSGALG00000008429	CRNKL1	97	87.106	Gallus_gallus
ENSPMEG00000008865	crnkl1	99	97.835	ENSGAFG00000014249	crnkl1	97	97.835	Gambusia_affinis
ENSPMEG00000008865	crnkl1	96	86.999	ENSGACG00000011852	crnkl1	90	91.667	Gasterosteus_aculeatus
ENSPMEG00000008865	crnkl1	88	85.404	ENSGAGG00000021233	CRNKL1	98	85.491	Gopherus_agassizii
ENSPMEG00000008865	crnkl1	93	84.593	ENSGGOG00000014176	CRNKL1	97	86.336	Gorilla_gorilla
ENSPMEG00000008865	crnkl1	98	89.409	ENSHBUG00000005246	crnkl1	88	94.461	Haplochromis_burtoni
ENSPMEG00000008865	crnkl1	93	84.884	ENSHGLG00000010856	CRNKL1	97	86.787	Heterocephalus_glaber_female
ENSPMEG00000008865	crnkl1	93	84.884	ENSHGLG00100011521	CRNKL1	97	86.787	Heterocephalus_glaber_male
ENSPMEG00000008865	crnkl1	91	89.955	ENSHCOG00000006420	crnkl1	97	89.568	Hippocampus_comes
ENSPMEG00000008865	crnkl1	88	89.214	ENSIPUG00000006751	crnkl1	90	89.247	Ictalurus_punctatus
ENSPMEG00000008865	crnkl1	86	70.126	ENSIPUG00000000315	-	99	71.339	Ictalurus_punctatus
ENSPMEG00000008865	crnkl1	92	75.735	ENSIPUG00000006836	-	98	76.383	Ictalurus_punctatus
ENSPMEG00000008865	crnkl1	93	85.029	ENSSTOG00000014747	CRNKL1	97	86.937	Ictidomys_tridecemlineatus
ENSPMEG00000008865	crnkl1	93	82.812	ENSJJAG00000016926	Crnkl1	97	84.604	Jaculus_jaculus
ENSPMEG00000008865	crnkl1	97	90.795	ENSKMAG00000003620	crnkl1	96	94.627	Kryptolebias_marmoratus
ENSPMEG00000008865	crnkl1	91	75.483	ENSLBEG00000003543	crnkl1	89	75.223	Labrus_bergylta
ENSPMEG00000008865	crnkl1	92	87.168	ENSLACG00000001129	CRNKL1	98	87.612	Latimeria_chalumnae
ENSPMEG00000008865	crnkl1	90	90.526	ENSLOCG00000016889	crnkl1	93	90.015	Lepisosteus_oculatus
ENSPMEG00000008865	crnkl1	93	84.325	ENSLAFG00000004512	CRNKL1	97	86.957	Loxodonta_africana
ENSPMEG00000008865	crnkl1	93	84.448	ENSMFAG00000039893	CRNKL1	97	86.186	Macaca_fascicularis
ENSPMEG00000008865	crnkl1	93	84.448	ENSMMUG00000007709	CRNKL1	97	86.186	Macaca_mulatta
ENSPMEG00000008865	crnkl1	93	84.448	ENSMNEG00000037490	CRNKL1	97	86.186	Macaca_nemestrina
ENSPMEG00000008865	crnkl1	93	84.448	ENSMLEG00000034885	CRNKL1	97	86.186	Mandrillus_leucophaeus
ENSPMEG00000008865	crnkl1	95	91.429	ENSMAMG00000008757	crnkl1	89	93.890	Mastacembelus_armatus
ENSPMEG00000008865	crnkl1	97	89.379	ENSMZEG00005022345	crnkl1	89	94.311	Maylandia_zebra
ENSPMEG00000008865	crnkl1	92	85.926	ENSMGAG00000003452	CRNKL1	92	86.677	Meleagris_gallopavo
ENSPMEG00000008865	crnkl1	94	84.493	ENSMAUG00000020764	Crnkl1	97	86.486	Mesocricetus_auratus
ENSPMEG00000008865	crnkl1	93	84.448	ENSMICG00000006048	CRNKL1	97	86.336	Microcebus_murinus
ENSPMEG00000008865	crnkl1	94	76.781	ENSMOCG00000000681	-	96	78.466	Microtus_ochrogaster
ENSPMEG00000008865	crnkl1	90	62.048	ENSMOCG00000004179	-	95	62.126	Microtus_ochrogaster
ENSPMEG00000008865	crnkl1	86	90.981	ENSMMOG00000017601	crnkl1	97	90.981	Mola_mola
ENSPMEG00000008865	crnkl1	92	80.000	ENSMODG00000010857	-	97	80.448	Monodelphis_domestica
ENSPMEG00000008865	crnkl1	92	83.333	ENSMODG00000005961	-	97	83.800	Monodelphis_domestica
ENSPMEG00000008865	crnkl1	96	63.277	ENSMALG00000011211	crnkl1	88	74.030	Monopterus_albus
ENSPMEG00000008865	crnkl1	94	84.783	MGP_CAROLIEiJ_G0024394	Crnkl1	97	86.787	Mus_caroli
ENSPMEG00000008865	crnkl1	94	84.783	ENSMUSG00000001767	Crnkl1	97	86.787	Mus_musculus
ENSPMEG00000008865	crnkl1	94	83.913	MGP_PahariEiJ_G0025838	Crnkl1	97	85.886	Mus_pahari
ENSPMEG00000008865	crnkl1	94	84.783	MGP_SPRETEiJ_G0025312	Crnkl1	97	86.787	Mus_spretus
ENSPMEG00000008865	crnkl1	93	85.320	ENSMPUG00000001226	CRNKL1	97	87.237	Mustela_putorius_furo
ENSPMEG00000008865	crnkl1	93	84.795	ENSMLUG00000016513	CRNKL1	86	86.807	Myotis_lucifugus
ENSPMEG00000008865	crnkl1	93	82.596	ENSNGAG00000023097	Crnkl1	97	84.389	Nannospalax_galili
ENSPMEG00000008865	crnkl1	97	89.583	ENSNBRG00000007867	crnkl1	88	94.461	Neolamprologus_brichardi
ENSPMEG00000008865	crnkl1	93	81.686	ENSNLEG00000009862	CRNKL1	97	83.333	Nomascus_leucogenys
ENSPMEG00000008865	crnkl1	92	80.707	ENSMEUG00000002361	-	97	81.222	Notamacropus_eugenii
ENSPMEG00000008865	crnkl1	90	86.061	ENSMEUG00000012167	-	98	86.565	Notamacropus_eugenii
ENSPMEG00000008865	crnkl1	80	59.302	ENSOPRG00000009242	-	61	59.302	Ochotona_princeps
ENSPMEG00000008865	crnkl1	93	84.448	ENSODEG00000012175	CRNKL1	97	86.336	Octodon_degus
ENSPMEG00000008865	crnkl1	98	89.430	ENSONIG00000018728	crnkl1	88	94.461	Oreochromis_niloticus
ENSPMEG00000008865	crnkl1	92	84.164	ENSOCUG00000015484	CRNKL1	80	86.677	Oryctolagus_cuniculus
ENSPMEG00000008865	crnkl1	97	87.832	ENSORLG00000017240	crnkl1	90	91.654	Oryzias_latipes
ENSPMEG00000008865	crnkl1	97	88.095	ENSORLG00020001742	crnkl1	90	91.654	Oryzias_latipes_hni
ENSPMEG00000008865	crnkl1	99	87.052	ENSORLG00015019564	crnkl1	90	91.803	Oryzias_latipes_hsok
ENSPMEG00000008865	crnkl1	97	88.408	ENSOMEG00000019895	crnkl1	90	92.399	Oryzias_melastigma
ENSPMEG00000008865	crnkl1	93	84.593	ENSOGAG00000011544	CRNKL1	97	86.486	Otolemur_garnettii
ENSPMEG00000008865	crnkl1	93	85.359	ENSOARG00000002150	CRNKL1	87	87.387	Ovis_aries
ENSPMEG00000008865	crnkl1	93	83.455	ENSPPAG00000027847	CRNKL1	81	85.285	Pan_paniscus
ENSPMEG00000008865	crnkl1	93	85.320	ENSPPRG00000001955	CRNKL1	97	87.237	Panthera_pardus
ENSPMEG00000008865	crnkl1	93	85.320	ENSPTIG00000007393	CRNKL1	97	87.237	Panthera_tigris_altaica
ENSPMEG00000008865	crnkl1	93	84.593	ENSPTRG00000030609	CRNKL1	97	86.336	Pan_troglodytes
ENSPMEG00000008865	crnkl1	93	84.448	ENSPANG00000017420	CRNKL1	97	86.186	Papio_anubis
ENSPMEG00000008865	crnkl1	90	86.036	ENSPKIG00000017093	crnkl1	88	85.460	Paramormyrops_kingsleyae
ENSPMEG00000008865	crnkl1	91	85.246	ENSPSIG00000012705	CRNKL1	97	85.329	Pelodiscus_sinensis
ENSPMEG00000008865	crnkl1	94	84.035	ENSPMGG00000006263	crnkl1	95	85.395	Periophthalmus_magnuspinnatus
ENSPMEG00000008865	crnkl1	94	84.783	ENSPEMG00000000073	-	96	86.787	Peromyscus_maniculatus_bairdii
ENSPMEG00000008865	crnkl1	92	83.111	ENSPMAG00000002250	crnkl1	97	83.185	Petromyzon_marinus
ENSPMEG00000008865	crnkl1	92	85.481	ENSPCIG00000025825	CRNKL1	94	85.970	Phascolarctos_cinereus
ENSPMEG00000008865	crnkl1	99	99.591	ENSPFOG00000005102	crnkl1	100	99.591	Poecilia_formosa
ENSPMEG00000008865	crnkl1	100	99.457	ENSPLAG00000007288	crnkl1	96	99.457	Poecilia_latipinna
ENSPMEG00000008865	crnkl1	99	97.838	ENSPREG00000012615	crnkl1	100	97.838	Poecilia_reticulata
ENSPMEG00000008865	crnkl1	93	84.334	ENSPPYG00000010747	CRNKL1	79	86.186	Pongo_abelii
ENSPMEG00000008865	crnkl1	91	80.746	ENSPCAG00000003296	CRNKL1	83	81.832	Procavia_capensis
ENSPMEG00000008865	crnkl1	93	83.309	ENSPCOG00000017608	CRNKL1	81	85.285	Propithecus_coquereli
ENSPMEG00000008865	crnkl1	93	85.066	ENSPVAG00000006207	CRNKL1	81	87.087	Pteropus_vampyrus
ENSPMEG00000008865	crnkl1	97	89.306	ENSPNYG00000001977	crnkl1	88	94.162	Pundamilia_nyererei
ENSPMEG00000008865	crnkl1	96	88.227	ENSPNAG00000001507	crnkl1	96	86.776	Pygocentrus_nattereri
ENSPMEG00000008865	crnkl1	94	84.638	ENSRNOG00000040045	Crnkl1	97	86.637	Rattus_norvegicus
ENSPMEG00000008865	crnkl1	94	84.783	ENSRNOG00000010587	Crnkl1	97	86.787	Rattus_norvegicus
ENSPMEG00000008865	crnkl1	93	84.448	ENSRBIG00000031770	CRNKL1	97	86.186	Rhinopithecus_bieti
ENSPMEG00000008865	crnkl1	93	84.302	ENSRROG00000040450	CRNKL1	97	86.036	Rhinopithecus_roxellana
ENSPMEG00000008865	crnkl1	88	36.667	YLR117C	CLF1	99	36.758	Saccharomyces_cerevisiae
ENSPMEG00000008865	crnkl1	94	84.370	ENSSBOG00000029672	CRNKL1	97	86.486	Saimiri_boliviensis_boliviensis
ENSPMEG00000008865	crnkl1	90	69.242	ENSSHAG00000011199	CRNKL1	99	69.242	Sarcophilus_harrisii
ENSPMEG00000008865	crnkl1	90	90.045	ENSSFOG00015000946	crnkl1	87	89.955	Scleropages_formosus
ENSPMEG00000008865	crnkl1	99	86.623	ENSSMAG00000007933	crnkl1	98	86.074	Scophthalmus_maximus
ENSPMEG00000008865	crnkl1	97	82.913	ENSSDUG00000012625	crnkl1	86	86.736	Seriola_dumerili
ENSPMEG00000008865	crnkl1	98	89.546	ENSSLDG00000021413	crnkl1	87	94.328	Seriola_lalandi_dorsalis
ENSPMEG00000008865	crnkl1	93	84.448	ENSSARG00000006443	CRNKL1	80	86.336	Sorex_araneus
ENSPMEG00000008865	crnkl1	92	86.499	ENSSPUG00000005254	CRNKL1	97	87.256	Sphenodon_punctatus
ENSPMEG00000008865	crnkl1	96	91.408	ENSSPAG00000016150	crnkl1	86	95.052	Stegastes_partitus
ENSPMEG00000008865	crnkl1	92	86.029	ENSSSCG00000038587	CRNKL1	96	87.237	Sus_scrofa
ENSPMEG00000008865	crnkl1	91	86.826	ENSTGUG00000007645	CRNKL1	96	86.826	Taeniopygia_guttata
ENSPMEG00000008865	crnkl1	91	85.246	ENSTRUG00000015417	crnkl1	89	85.395	Takifugu_rubripes
ENSPMEG00000008865	crnkl1	91	89.820	ENSTNIG00000010710	crnkl1	97	89.820	Tetraodon_nigroviridis
ENSPMEG00000008865	crnkl1	85	84.640	ENSTBEG00000001304	CRNKL1	82	84.762	Tupaia_belangeri
ENSPMEG00000008865	crnkl1	85	82.400	ENSTTRG00000000484	CRNKL1	81	82.540	Tursiops_truncatus
ENSPMEG00000008865	crnkl1	93	85.320	ENSUAMG00000018586	CRNKL1	97	87.237	Ursus_americanus
ENSPMEG00000008865	crnkl1	93	85.320	ENSUMAG00000024957	CRNKL1	97	87.237	Ursus_maritimus
ENSPMEG00000008865	crnkl1	93	85.212	ENSVVUG00000012559	CRNKL1	80	87.237	Vulpes_vulpes
ENSPMEG00000008865	crnkl1	93	85.924	ENSXETG00000009698	crnkl1	98	86.458	Xenopus_tropicalis
ENSPMEG00000008865	crnkl1	99	96.904	ENSXCOG00000000824	crnkl1	100	96.904	Xiphophorus_couchianus
ENSPMEG00000008865	crnkl1	99	97.709	ENSXMAG00000006896	crnkl1	100	97.709	Xiphophorus_maculatus