EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000008884 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.3
Alias: -
Full Name: uncharacterized LOC106925651
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 3548 bases
Position: chrKQ551776.1:276467-280014
Accession: 106925651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000007252	Sua5_yciO_yrdC	PF01300.18	4.5e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000004448	-	2646	XM_015000093	ENSPMEP00000007252	881 (aa)	XP_014855579	-

Gene Model

Click here to download ENSPMEG00000008884's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000008884's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000008884	si:ch211-153b23.3	58	33.650	ENSPMEG00000007538	si:ch211-153b23.4	63	33.650

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000008884	si:ch211-153b23.3	59	32.143	ENSAPOG00000006144	si:ch211-153b23.4	60	32.143	Acanthochromis_polyacanthus
ENSPMEG00000008884	si:ch211-153b23.3	59	32.143	ENSAPOG00000006178	si:ch211-153b23.4	59	32.143	Acanthochromis_polyacanthus
ENSPMEG00000008884	si:ch211-153b23.3	93	92.121	ENSACIG00000006968	si:ch211-153b23.3	100	92.121	Amphilophus_citrinellus
ENSPMEG00000008884	si:ch211-153b23.3	99	85.277	ENSAOCG00000010974	si:ch211-153b23.3	100	85.277	Amphiprion_ocellaris
ENSPMEG00000008884	si:ch211-153b23.3	59	31.870	ENSAPEG00000014665	si:ch211-153b23.4	60	31.870	Amphiprion_percula
ENSPMEG00000008884	si:ch211-153b23.3	99	84.938	ENSAPEG00000014700	si:ch211-153b23.3	100	84.938	Amphiprion_percula
ENSPMEG00000008884	si:ch211-153b23.3	99	80.747	ENSATEG00000004956	si:ch211-153b23.3	100	80.747	Anabas_testudineus
ENSPMEG00000008884	si:ch211-153b23.3	59	32.008	ENSATEG00000004948	si:ch211-153b23.4	59	32.008	Anabas_testudineus
ENSPMEG00000008884	si:ch211-153b23.3	59	33.459	ENSACLG00000005471	si:ch211-153b23.4	58	33.459	Astatotilapia_calliptera
ENSPMEG00000008884	si:ch211-153b23.3	99	80.817	ENSACLG00000005894	si:ch211-153b23.3	100	81.066	Astatotilapia_calliptera
ENSPMEG00000008884	si:ch211-153b23.3	99	71.364	ENSAMXG00000038564	si:ch211-153b23.3	99	71.591	Astyanax_mexicanus
ENSPMEG00000008884	si:ch211-153b23.3	58	33.396	ENSAMXG00000013879	si:ch211-153b23.4	61	33.396	Astyanax_mexicanus
ENSPMEG00000008884	si:ch211-153b23.3	99	79.342	ENSCSEG00000014853	si:ch211-153b23.3	100	79.342	Cynoglossus_semilaevis
ENSPMEG00000008884	si:ch211-153b23.3	59	34.216	ENSCVAG00000021145	si:ch211-153b23.4	64	34.216	Cyprinodon_variegatus
ENSPMEG00000008884	si:ch211-153b23.3	99	92.027	ENSCVAG00000021124	si:ch211-153b23.3	100	92.027	Cyprinodon_variegatus
ENSPMEG00000008884	si:ch211-153b23.3	100	71.044	ENSDARG00000104919	si:ch211-153b23.3	100	71.044	Danio_rerio
ENSPMEG00000008884	si:ch211-153b23.3	80	83.929	ENSELUG00000004912	si:ch211-153b23.3	100	83.929	Esox_lucius
ENSPMEG00000008884	si:ch211-153b23.3	59	31.579	ENSELUG00000004961	si:ch211-153b23.4	58	31.579	Esox_lucius
ENSPMEG00000008884	si:ch211-153b23.3	100	92.622	ENSFHEG00000010030	si:ch211-153b23.3	100	92.622	Fundulus_heteroclitus
ENSPMEG00000008884	si:ch211-153b23.3	74	30.240	ENSFHEG00000010001	si:ch211-153b23.4	81	30.240	Fundulus_heteroclitus
ENSPMEG00000008884	si:ch211-153b23.3	100	96.141	ENSGAFG00000007455	si:ch211-153b23.3	100	96.141	Gambusia_affinis
ENSPMEG00000008884	si:ch211-153b23.3	54	33.265	ENSGAFG00000007442	si:ch211-153b23.4	57	32.854	Gambusia_affinis
ENSPMEG00000008884	si:ch211-153b23.3	59	32.136	ENSGACG00000018253	si:ch211-153b23.4	60	32.136	Gasterosteus_aculeatus
ENSPMEG00000008884	si:ch211-153b23.3	55	33.133	ENSHBUG00000000013	si:ch211-153b23.4	64	33.133	Haplochromis_burtoni
ENSPMEG00000008884	si:ch211-153b23.3	99	81.044	ENSHBUG00000001760	si:ch211-153b23.3	100	81.293	Haplochromis_burtoni
ENSPMEG00000008884	si:ch211-153b23.3	100	71.008	ENSIPUG00000015213	si:ch211-153b23.3	100	71.008	Ictalurus_punctatus
ENSPMEG00000008884	si:ch211-153b23.3	72	31.087	ENSIPUG00000015205	si:ch211-153b23.4	75	31.087	Ictalurus_punctatus
ENSPMEG00000008884	si:ch211-153b23.3	59	33.144	ENSKMAG00000006919	-	59	33.144	Kryptolebias_marmoratus
ENSPMEG00000008884	si:ch211-153b23.3	58	33.080	ENSKMAG00000006829	si:ch211-153b23.4	63	33.080	Kryptolebias_marmoratus
ENSPMEG00000008884	si:ch211-153b23.3	100	85.017	ENSKMAG00000006792	si:ch211-153b23.3	100	85.017	Kryptolebias_marmoratus
ENSPMEG00000008884	si:ch211-153b23.3	100	80.834	ENSLBEG00000026324	si:ch211-153b23.3	100	80.834	Labrus_bergylta
ENSPMEG00000008884	si:ch211-153b23.3	59	32.264	ENSLBEG00000026309	si:ch211-153b23.4	59	32.264	Labrus_bergylta
ENSPMEG00000008884	si:ch211-153b23.3	94	57.313	ENSLACG00000005800	-	99	57.788	Latimeria_chalumnae
ENSPMEG00000008884	si:ch211-153b23.3	84	53.061	ENSLOCG00000015063	si:ch211-153b23.3	98	53.061	Lepisosteus_oculatus
ENSPMEG00000008884	si:ch211-153b23.3	59	32.510	ENSMAMG00000009358	si:ch211-153b23.4	63	32.510	Mastacembelus_armatus
ENSPMEG00000008884	si:ch211-153b23.3	59	32.765	ENSMAMG00000009277	si:ch211-153b23.4	62	32.765	Mastacembelus_armatus
ENSPMEG00000008884	si:ch211-153b23.3	99	82.653	ENSMAMG00000009328	si:ch211-153b23.3	100	82.653	Mastacembelus_armatus
ENSPMEG00000008884	si:ch211-153b23.3	99	80.931	ENSMZEG00005011450	si:ch211-153b23.3	100	81.179	Maylandia_zebra
ENSPMEG00000008884	si:ch211-153b23.3	59	33.270	ENSMZEG00005011433	si:ch211-153b23.4	63	33.270	Maylandia_zebra
ENSPMEG00000008884	si:ch211-153b23.3	99	81.017	ENSMMOG00000004436	si:ch211-153b23.3	100	81.017	Mola_mola
ENSPMEG00000008884	si:ch211-153b23.3	59	32.638	ENSMMOG00000004425	si:ch211-153b23.4	64	32.638	Mola_mola
ENSPMEG00000008884	si:ch211-153b23.3	58	33.144	ENSNBRG00000013392	si:ch211-153b23.4	65	33.144	Neolamprologus_brichardi
ENSPMEG00000008884	si:ch211-153b23.3	99	80.931	ENSNBRG00000013370	si:ch211-153b23.3	100	81.179	Neolamprologus_brichardi
ENSPMEG00000008884	si:ch211-153b23.3	59	33.270	ENSONIG00000017875	si:ch211-153b23.4	59	33.270	Oreochromis_niloticus
ENSPMEG00000008884	si:ch211-153b23.3	99	80.990	ENSORLG00000006161	si:ch211-153b23.3	99	80.990	Oryzias_latipes
ENSPMEG00000008884	si:ch211-153b23.3	59	32.068	ENSORLG00000006169	si:ch211-153b23.4	59	32.068	Oryzias_latipes
ENSPMEG00000008884	si:ch211-153b23.3	59	32.258	ENSORLG00020009905	si:ch211-153b23.4	59	32.258	Oryzias_latipes_hni
ENSPMEG00000008884	si:ch211-153b23.3	97	82.201	ENSORLG00020000910	si:ch211-153b23.3	100	82.201	Oryzias_latipes_hni
ENSPMEG00000008884	si:ch211-153b23.3	59	32.448	ENSORLG00015003709	si:ch211-153b23.4	59	32.448	Oryzias_latipes_hsok
ENSPMEG00000008884	si:ch211-153b23.3	97	81.776	ENSORLG00015003698	si:ch211-153b23.3	100	81.776	Oryzias_latipes_hsok
ENSPMEG00000008884	si:ch211-153b23.3	99	82.227	ENSOMEG00000007661	si:ch211-153b23.3	99	82.227	Oryzias_melastigma
ENSPMEG00000008884	si:ch211-153b23.3	97	71.860	ENSPKIG00000022450	si:ch211-153b23.3	100	71.860	Paramormyrops_kingsleyae
ENSPMEG00000008884	si:ch211-153b23.3	99	49.834	ENSPKIG00000021029	-	99	49.834	Paramormyrops_kingsleyae
ENSPMEG00000008884	si:ch211-153b23.3	82	79.592	ENSPMGG00000001311	si:ch211-153b23.3	99	82.979	Periophthalmus_magnuspinnatus
ENSPMEG00000008884	si:ch211-153b23.3	74	30.792	ENSPFOG00000012164	si:ch211-153b23.4	91	30.792	Poecilia_formosa
ENSPMEG00000008884	si:ch211-153b23.3	100	98.423	ENSPFOG00000012289	si:ch211-153b23.3	100	98.423	Poecilia_formosa
ENSPMEG00000008884	si:ch211-153b23.3	99	99.088	ENSPLAG00000016320	si:ch211-153b23.3	100	99.088	Poecilia_latipinna
ENSPMEG00000008884	si:ch211-153b23.3	74	30.769	ENSPLAG00000016295	si:ch211-153b23.4	80	30.769	Poecilia_latipinna
ENSPMEG00000008884	si:ch211-153b23.3	99	80.817	ENSPNYG00000000251	si:ch211-153b23.3	100	81.066	Pundamilia_nyererei
ENSPMEG00000008884	si:ch211-153b23.3	59	33.270	ENSPNYG00000000250	si:ch211-153b23.4	63	33.270	Pundamilia_nyererei
ENSPMEG00000008884	si:ch211-153b23.3	59	32.957	ENSPNAG00000019554	si:ch211-153b23.4	58	32.957	Pygocentrus_nattereri
ENSPMEG00000008884	si:ch211-153b23.3	100	73.356	ENSPNAG00000019592	si:ch211-153b23.3	100	73.356	Pygocentrus_nattereri
ENSPMEG00000008884	si:ch211-153b23.3	59	32.270	ENSSFOG00015010891	si:ch211-153b23.4	60	32.270	Scleropages_formosus
ENSPMEG00000008884	si:ch211-153b23.3	100	72.452	ENSSFOG00015010910	si:ch211-153b23.3	100	72.452	Scleropages_formosus
ENSPMEG00000008884	si:ch211-153b23.3	68	50.962	ENSSFOG00015009030	-	96	51.125	Scleropages_formosus
ENSPMEG00000008884	si:ch211-153b23.3	99	83.713	ENSSMAG00000005446	si:ch211-153b23.3	100	83.713	Scophthalmus_maximus
ENSPMEG00000008884	si:ch211-153b23.3	59	32.203	ENSSDUG00000006671	si:ch211-153b23.4	64	32.203	Seriola_dumerili
ENSPMEG00000008884	si:ch211-153b23.3	99	83.918	ENSSLDG00000008629	si:ch211-153b23.3	100	83.918	Seriola_lalandi_dorsalis
ENSPMEG00000008884	si:ch211-153b23.3	53	33.471	ENSTGUG00000005499	-	57	33.471	Taeniopygia_guttata
ENSPMEG00000008884	si:ch211-153b23.3	99	77.205	ENSTRUG00000020530	si:ch211-153b23.3	100	77.549	Takifugu_rubripes
ENSPMEG00000008884	si:ch211-153b23.3	93	80.297	ENSTNIG00000008962	si:ch211-153b23.3	99	80.297	Tetraodon_nigroviridis
ENSPMEG00000008884	si:ch211-153b23.3	100	96.141	ENSXMAG00000029318	si:ch211-153b23.3	100	96.141	Xiphophorus_maculatus
ENSPMEG00000008884	si:ch211-153b23.3	59	33.837	ENSXMAG00000021388	si:ch211-153b23.4	62	33.837	Xiphophorus_maculatus
ENSPMEG00000008884	si:ch211-153b23.3	59	34.026	ENSXMAG00000009416	-	61	34.026	Xiphophorus_maculatus