EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000009238 (Gene tree)
Gene ID: 106906684
Gene Symbol: ythdc1
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 13196 bases
Position: chrKQ553381.1:54059-67254
Accession: 106906684
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000007595	YTH	PF04146.15	8e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000003873	-	2293	XM_014972053	ENSPMEP00000007595	663 (aa)	XP_014827539	UPI00072E6FCC

Gene Model

Click here to download ENSPMEG00000009238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000009238's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000009238	ythdc1	60	65.625	ENSG00000083896	YTHDC1	57	59.545	Homo_sapiens
ENSPMEG00000009238	ythdc1	82	79.787	ENSAPOG00000013997	ythdc1	93	73.940	Acanthochromis_polyacanthus
ENSPMEG00000009238	ythdc1	60	64.989	ENSAMEG00000005688	YTHDC1	57	60.000	Ailuropoda_melanoleuca
ENSPMEG00000009238	ythdc1	62	76.829	ENSACIG00000019728	ythdc1	62	76.413	Amphilophus_citrinellus
ENSPMEG00000009238	ythdc1	94	82.786	ENSAOCG00000000239	ythdc1	94	81.690	Amphiprion_ocellaris
ENSPMEG00000009238	ythdc1	83	83.009	ENSAPEG00000000618	ythdc1	89	82.416	Amphiprion_percula
ENSPMEG00000009238	ythdc1	88	78.464	ENSATEG00000023007	ythdc1	91	81.183	Anabas_testudineus
ENSPMEG00000009238	ythdc1	92	54.911	ENSAPLG00000009921	YTHDC1	50	65.591	Anas_platyrhynchos
ENSPMEG00000009238	ythdc1	94	54.783	ENSACAG00000009697	YTHDC1	58	57.596	Anolis_carolinensis
ENSPMEG00000009238	ythdc1	94	82.003	ENSACLG00000019371	ythdc1	94	79.812	Astatotilapia_calliptera
ENSPMEG00000009238	ythdc1	94	62.712	ENSAMXG00000006978	ythdc1	57	68.171	Astyanax_mexicanus
ENSPMEG00000009238	ythdc1	60	64.073	ENSBTAG00000015572	YTHDC1	54	55.314	Bos_taurus
ENSPMEG00000009238	ythdc1	60	64.989	ENSCAFG00020027112	YTHDC1	57	57.047	Canis_lupus_dingo
ENSPMEG00000009238	ythdc1	60	58.313	ENSCHIG00000004810	YTHDC1	50	65.693	Capra_hircus
ENSPMEG00000009238	ythdc1	60	65.625	ENSTSYG00000011668	YTHDC1	57	59.545	Carlito_syrichta
ENSPMEG00000009238	ythdc1	60	58.072	ENSCPOG00000010929	YTHDC1	54	53.226	Cavia_porcellus
ENSPMEG00000009238	ythdc1	60	65.625	ENSCCAG00000035754	YTHDC1	57	59.545	Cebus_capucinus
ENSPMEG00000009238	ythdc1	60	65.625	ENSCATG00000036320	YTHDC1	51	65.693	Cercocebus_atys
ENSPMEG00000009238	ythdc1	62	64.471	ENSCLAG00000005482	YTHDC1	58	58.259	Chinchilla_lanigera
ENSPMEG00000009238	ythdc1	93	57.781	ENSCPBG00000021965	YTHDC1	62	59.637	Chrysemys_picta_bellii
ENSPMEG00000009238	ythdc1	60	65.625	ENSCANG00000004769	YTHDC1	50	65.693	Colobus_angolensis_palliatus
ENSPMEG00000009238	ythdc1	60	65.385	ENSCGRG00001000816	Ythdc1	56	60.000	Cricetulus_griseus_chok1gshd
ENSPMEG00000009238	ythdc1	60	65.385	ENSCGRG00000009807	Ythdc1	57	59.318	Cricetulus_griseus_crigri
ENSPMEG00000009238	ythdc1	94	80.691	ENSCSEG00000020404	ythdc1	94	80.534	Cynoglossus_semilaevis
ENSPMEG00000009238	ythdc1	61	93.300	ENSCVAG00000022349	ythdc1	59	93.052	Cyprinodon_variegatus
ENSPMEG00000009238	ythdc1	94	62.267	ENSDARG00000051953	ythdc1	58	66.271	Danio_rerio
ENSPMEG00000009238	ythdc1	94	54.077	ENSDNOG00000004949	YTHDC1	57	59.545	Dasypus_novemcinctus
ENSPMEG00000009238	ythdc1	60	65.625	ENSDORG00000013045	Ythdc1	58	59.545	Dipodomys_ordii
ENSPMEG00000009238	ythdc1	64	67.532	ENSETEG00000001878	YTHDC1	52	80.000	Echinops_telfairi
ENSPMEG00000009238	ythdc1	60	64.989	ENSEASG00005018383	YTHDC1	61	60.000	Equus_asinus_asinus
ENSPMEG00000009238	ythdc1	76	65.721	ENSECAG00000018303	YTHDC1	56	65.591	Equus_caballus
ENSPMEG00000009238	ythdc1	60	64.531	ENSEEUG00000015466	YTHDC1	57	58.957	Erinaceus_europaeus
ENSPMEG00000009238	ythdc1	94	60.389	ENSELUG00000014029	ythdc1	89	61.345	Esox_lucius
ENSPMEG00000009238	ythdc1	60	65.385	ENSFCAG00000026791	YTHDC1	57	60.000	Felis_catus
ENSPMEG00000009238	ythdc1	75	65.000	ENSFALG00000006581	YTHDC1	81	65.591	Ficedula_albicollis
ENSPMEG00000009238	ythdc1	60	65.144	ENSFDAG00000018560	YTHDC1	58	59.318	Fukomys_damarensis
ENSPMEG00000009238	ythdc1	66	81.166	ENSGMOG00000018815	ythdc1	58	75.410	Gadus_morhua
ENSPMEG00000009238	ythdc1	92	55.352	ENSGALG00000035906	YTHDC1	55	59.864	Gallus_gallus
ENSPMEG00000009238	ythdc1	69	83.772	ENSGAFG00000001759	ythdc1	55	99.197	Gambusia_affinis
ENSPMEG00000009238	ythdc1	94	67.294	ENSGACG00000015486	ythdc1	57	71.396	Gasterosteus_aculeatus
ENSPMEG00000009238	ythdc1	93	57.734	ENSGAGG00000007108	YTHDC1	57	65.049	Gopherus_agassizii
ENSPMEG00000009238	ythdc1	60	65.625	ENSGGOG00000021958	YTHDC1	50	65.693	Gorilla_gorilla
ENSPMEG00000009238	ythdc1	94	82.160	ENSHBUG00000019288	ythdc1	94	79.969	Haplochromis_burtoni
ENSPMEG00000009238	ythdc1	60	65.144	ENSHGLG00000006319	-	58	58.259	Heterocephalus_glaber_female
ENSPMEG00000009238	ythdc1	60	63.810	ENSHGLG00100001556	-	58	57.143	Heterocephalus_glaber_male
ENSPMEG00000009238	ythdc1	71	79.487	ENSHCOG00000001520	ythdc1	89	77.586	Hippocampus_comes
ENSPMEG00000009238	ythdc1	94	60.280	ENSIPUG00000018136	ythdc1	58	66.508	Ictalurus_punctatus
ENSPMEG00000009238	ythdc1	60	64.663	ENSJJAG00000010268	Ythdc1	57	59.397	Jaculus_jaculus
ENSPMEG00000009238	ythdc1	61	86.520	ENSKMAG00000006483	ythdc1	85	88.725	Kryptolebias_marmoratus
ENSPMEG00000009238	ythdc1	61	73.759	ENSLBEG00000020831	ythdc1	81	66.925	Labrus_bergylta
ENSPMEG00000009238	ythdc1	59	64.750	ENSLACG00000004893	YTHDC1	60	59.497	Latimeria_chalumnae
ENSPMEG00000009238	ythdc1	94	56.916	ENSLOCG00000003045	ythdc1	52	67.385	Lepisosteus_oculatus
ENSPMEG00000009238	ythdc1	80	53.504	ENSLAFG00000021592	YTHDC1	65	64.365	Loxodonta_africana
ENSPMEG00000009238	ythdc1	60	65.625	ENSMFAG00000031927	YTHDC1	50	65.693	Macaca_fascicularis
ENSPMEG00000009238	ythdc1	60	65.625	ENSMNEG00000033751	YTHDC1	50	65.693	Macaca_nemestrina
ENSPMEG00000009238	ythdc1	60	65.625	ENSMLEG00000042147	YTHDC1	50	65.693	Mandrillus_leucophaeus
ENSPMEG00000009238	ythdc1	60	87.624	ENSMAMG00000013122	ythdc1	92	79.037	Mastacembelus_armatus
ENSPMEG00000009238	ythdc1	94	82.003	ENSMZEG00005023173	ythdc1	94	79.812	Maylandia_zebra
ENSPMEG00000009238	ythdc1	60	65.385	ENSMAUG00000001286	Ythdc1	56	60.000	Mesocricetus_auratus
ENSPMEG00000009238	ythdc1	94	54.302	ENSMICG00000034640	YTHDC1	56	60.000	Microcebus_murinus
ENSPMEG00000009238	ythdc1	60	65.385	ENSMOCG00000020201	Ythdc1	58	58.259	Microtus_ochrogaster
ENSPMEG00000009238	ythdc1	74	74.383	ENSMMOG00000021200	ythdc1	93	67.481	Mola_mola
ENSPMEG00000009238	ythdc1	99	42.066	ENSMODG00000014337	-	60	58.362	Monodelphis_domestica
ENSPMEG00000009238	ythdc1	66	44.864	ENSMODG00000009173	-	74	49.462	Monodelphis_domestica
ENSPMEG00000009238	ythdc1	95	37.659	ENSMODG00000010076	-	50	49.731	Monodelphis_domestica
ENSPMEG00000009238	ythdc1	51	49.133	ENSMODG00000004117	-	93	48.521	Monodelphis_domestica
ENSPMEG00000009238	ythdc1	94	56.657	ENSMODG00000020754	-	59	60.000	Monodelphis_domestica
ENSPMEG00000009238	ythdc1	83	80.952	ENSMALG00000013412	ythdc1	93	80.570	Monopterus_albus
ENSPMEG00000009238	ythdc1	71	68.782	ENSMPUG00000001743	YTHDC1	57	71.429	Mustela_putorius_furo
ENSPMEG00000009238	ythdc1	73	82.482	ENSNBRG00000007663	ythdc1	87	73.684	Neolamprologus_brichardi
ENSPMEG00000009238	ythdc1	60	63.371	ENSNLEG00000009202	YTHDC1	57	57.812	Nomascus_leucogenys
ENSPMEG00000009238	ythdc1	61	68.125	ENSOPRG00000008986	YTHDC1	54	62.422	Ochotona_princeps
ENSPMEG00000009238	ythdc1	60	64.183	ENSODEG00000001715	YTHDC1	57	59.318	Octodon_degus
ENSPMEG00000009238	ythdc1	94	95.455	ENSONIG00000012651	ythdc1	94	80.282	Oreochromis_niloticus
ENSPMEG00000009238	ythdc1	85	68.262	ENSOCUG00000015886	YTHDC1	71	65.591	Oryctolagus_cuniculus
ENSPMEG00000009238	ythdc1	94	79.081	ENSORLG00000030544	ythdc1	61	86.946	Oryzias_latipes
ENSPMEG00000009238	ythdc1	94	79.905	ENSORLG00020019316	ythdc1	95	76.899	Oryzias_latipes_hni
ENSPMEG00000009238	ythdc1	94	75.824	ENSOMEG00000000551	ythdc1	95	74.725	Oryzias_melastigma
ENSPMEG00000009238	ythdc1	60	65.675	ENSOGAG00000003362	YTHDC1	57	60.000	Otolemur_garnettii
ENSPMEG00000009238	ythdc1	60	65.625	ENSPPAG00000041315	YTHDC1	51	65.693	Pan_paniscus
ENSPMEG00000009238	ythdc1	60	65.385	ENSPPRG00000011979	YTHDC1	56	60.714	Panthera_pardus
ENSPMEG00000009238	ythdc1	60	64.904	ENSPTIG00000015527	YTHDC1	56	60.238	Panthera_tigris_altaica
ENSPMEG00000009238	ythdc1	60	65.625	ENSPTRG00000016105	YTHDC1	51	65.693	Pan_troglodytes
ENSPMEG00000009238	ythdc1	60	65.625	ENSPANG00000021590	YTHDC1	50	65.693	Papio_anubis
ENSPMEG00000009238	ythdc1	94	59.559	ENSPKIG00000018497	ythdc1	75	61.009	Paramormyrops_kingsleyae
ENSPMEG00000009238	ythdc1	92	55.917	ENSPSIG00000002782	YTHDC1	60	59.864	Pelodiscus_sinensis
ENSPMEG00000009238	ythdc1	59	70.393	ENSPMGG00000000970	-	77	71.517	Periophthalmus_magnuspinnatus
ENSPMEG00000009238	ythdc1	60	65.385	ENSPEMG00000013850	Ythdc1	58	59.318	Peromyscus_maniculatus_bairdii
ENSPMEG00000009238	ythdc1	94	56.805	ENSPCIG00000006870	YTHDC1	59	60.000	Phascolarctos_cinereus
ENSPMEG00000009238	ythdc1	100	99.698	ENSPFOG00000013404	ythdc1	100	99.698	Poecilia_formosa
ENSPMEG00000009238	ythdc1	71	100.000	ENSPLAG00000011079	ythdc1	99	100.000	Poecilia_latipinna
ENSPMEG00000009238	ythdc1	100	87.519	ENSPREG00000016973	ythdc1	100	87.519	Poecilia_reticulata
ENSPMEG00000009238	ythdc1	60	64.760	ENSPPYG00000014726	YTHDC1	65	59.545	Pongo_abelii
ENSPMEG00000009238	ythdc1	94	51.863	ENSPCOG00000019105	YTHDC1	54	56.311	Propithecus_coquereli
ENSPMEG00000009238	ythdc1	94	82.003	ENSPNYG00000011687	ythdc1	94	79.812	Pundamilia_nyererei
ENSPMEG00000009238	ythdc1	94	62.730	ENSPNAG00000028365	ythdc1	57	67.696	Pygocentrus_nattereri
ENSPMEG00000009238	ythdc1	60	65.625	ENSRROG00000035028	YTHDC1	50	65.693	Rhinopithecus_roxellana
ENSPMEG00000009238	ythdc1	60	65.625	ENSSBOG00000022353	YTHDC1	50	65.693	Saimiri_boliviensis_boliviensis
ENSPMEG00000009238	ythdc1	94	55.621	ENSSHAG00000002538	YTHDC1	65	60.000	Sarcophilus_harrisii
ENSPMEG00000009238	ythdc1	94	61.240	ENSSFOG00015003298	ythdc1	58	67.299	Scleropages_formosus
ENSPMEG00000009238	ythdc1	94	82.019	ENSSMAG00000009086	ythdc1	94	81.703	Scophthalmus_maximus
ENSPMEG00000009238	ythdc1	94	82.143	ENSSDUG00000022008	ythdc1	59	89.163	Seriola_dumerili
ENSPMEG00000009238	ythdc1	94	80.680	ENSSLDG00000007926	ythdc1	59	89.163	Seriola_lalandi_dorsalis
ENSPMEG00000009238	ythdc1	60	63.844	ENSSARG00000010960	YTHDC1	74	58.499	Sorex_araneus
ENSPMEG00000009238	ythdc1	94	54.449	ENSSPUG00000009357	YTHDC1	61	59.292	Sphenodon_punctatus
ENSPMEG00000009238	ythdc1	94	83.851	ENSSPAG00000011449	ythdc1	94	82.609	Stegastes_partitus
ENSPMEG00000009238	ythdc1	60	64.989	ENSSSCG00000035505	YTHDC1	61	58.929	Sus_scrofa
ENSPMEG00000009238	ythdc1	94	55.409	ENSTGUG00000004452	-	59	60.091	Taeniopygia_guttata
ENSPMEG00000009238	ythdc1	75	74.263	ENSTRUG00000010142	ythdc1	63	77.641	Takifugu_rubripes
ENSPMEG00000009238	ythdc1	96	73.447	ENSTNIG00000013243	ythdc1	62	83.990	Tetraodon_nigroviridis
ENSPMEG00000009238	ythdc1	60	63.844	ENSTTRG00000005083	YTHDC1	57	58.864	Tursiops_truncatus
ENSPMEG00000009238	ythdc1	60	65.385	ENSUAMG00000010388	YTHDC1	61	60.000	Ursus_americanus
ENSPMEG00000009238	ythdc1	92	50.229	ENSUMAG00000013668	YTHDC1	61	51.794	Ursus_maritimus
ENSPMEG00000009238	ythdc1	94	53.756	ENSVPAG00000009040	YTHDC1	56	60.000	Vicugna_pacos
ENSPMEG00000009238	ythdc1	60	64.989	ENSVVUG00000005387	YTHDC1	61	60.000	Vulpes_vulpes
ENSPMEG00000009238	ythdc1	94	56.288	ENSXETG00000017960	ythdc1	57	64.692	Xenopus_tropicalis
ENSPMEG00000009238	ythdc1	52	92.857	ENSXCOG00000000530	ythdc1	89	84.071	Xiphophorus_couchianus
ENSPMEG00000009238	ythdc1	100	97.590	ENSXMAG00000005196	ythdc1	100	97.590	Xiphophorus_maculatus