EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000009320 (Gene tree)
Gene ID: 106924988
Gene Symbol: gar1
Alias: -
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 7658 bases
Position: chrKQ551719.1:225718-233375
Accession: 106924988
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000025974	Gar1	PF04410.14	5.7e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000003743	-	2227	XM_014998989	ENSPMEP00000025974	209 (aa)	XP_014854475	UPI00072E178C

Gene Model

Click here to download ENSPMEG00000009320's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000009320's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000009320	gar1	52	97.222	ENSAPOG00000019754	gar1	51	97.222	Acanthochromis_polyacanthus
ENSPMEG00000009320	gar1	51	92.523	ENSAMEG00000004605	GAR1	52	92.523	Ailuropoda_melanoleuca
ENSPMEG00000009320	gar1	52	97.222	ENSAOCG00000020947	gar1	50	97.222	Amphiprion_ocellaris
ENSPMEG00000009320	gar1	52	97.222	ENSAPEG00000001676	gar1	50	97.222	Amphiprion_percula
ENSPMEG00000009320	gar1	52	98.148	ENSATEG00000003733	gar1	50	98.148	Anabas_testudineus
ENSPMEG00000009320	gar1	51	90.566	ENSAPLG00000010926	GAR1	59	90.566	Anas_platyrhynchos
ENSPMEG00000009320	gar1	51	91.509	ENSACAG00000010031	GAR1	50	91.509	Anolis_carolinensis
ENSPMEG00000009320	gar1	53	96.364	ENSACLG00000010029	gar1	64	81.119	Astatotilapia_calliptera
ENSPMEG00000009320	gar1	51	93.458	ENSBTAG00000000748	GAR1	51	93.458	Bos_taurus
ENSPMEG00000009320	gar1	50	93.269	ENSCAFG00020015566	GAR1	56	93.458	Canis_lupus_dingo
ENSPMEG00000009320	gar1	53	91.818	ENSCHIG00000016026	-	51	93.458	Capra_hircus
ENSPMEG00000009320	gar1	51	85.981	ENSTSYG00000026632	-	55	85.981	Carlito_syrichta
ENSPMEG00000009320	gar1	51	94.393	ENSTSYG00000013668	-	50	94.393	Carlito_syrichta
ENSPMEG00000009320	gar1	53	92.727	ENSCATG00000021854	GAR1	54	94.393	Cercocebus_atys
ENSPMEG00000009320	gar1	53	90.909	ENSCLAG00000005335	GAR1	69	94.545	Chinchilla_lanigera
ENSPMEG00000009320	gar1	51	92.523	ENSCSAG00000003922	GAR1	54	94.393	Chlorocebus_sabaeus
ENSPMEG00000009320	gar1	51	92.453	ENSCPBG00000004310	GAR1	54	92.453	Chrysemys_picta_bellii
ENSPMEG00000009320	gar1	52	97.222	ENSCVAG00000002103	gar1	52	97.222	Cyprinodon_variegatus
ENSPMEG00000009320	gar1	51	94.393	ENSDARG00000076526	gar1	73	81.212	Danio_rerio
ENSPMEG00000009320	gar1	51	93.458	ENSDNOG00000037632	GAR1	54	93.458	Dasypus_novemcinctus
ENSPMEG00000009320	gar1	53	92.727	ENSEASG00005004658	GAR1	50	94.393	Equus_asinus_asinus
ENSPMEG00000009320	gar1	53	91.818	ENSECAG00000013624	GAR1	54	93.458	Equus_caballus
ENSPMEG00000009320	gar1	50	93.269	ENSELUG00000021108	gar1	67	80.952	Esox_lucius
ENSPMEG00000009320	gar1	51	57.009	ENSFCAG00000025841	-	50	59.813	Felis_catus
ENSPMEG00000009320	gar1	51	93.458	ENSFCAG00000040791	-	51	93.458	Felis_catus
ENSPMEG00000009320	gar1	100	93.519	ENSFHEG00000008068	gar1	100	93.519	Fundulus_heteroclitus
ENSPMEG00000009320	gar1	52	91.667	ENSGMOG00000012419	gar1	58	81.679	Gadus_morhua
ENSPMEG00000009320	gar1	99	97.630	ENSGAFG00000016833	gar1	90	97.630	Gambusia_affinis
ENSPMEG00000009320	gar1	50	93.269	ENSGAGG00000004393	GAR1	53	93.269	Gopherus_agassizii
ENSPMEG00000009320	gar1	50	76.923	ENSGGOG00000036205	-	53	75.701	Gorilla_gorilla
ENSPMEG00000009320	gar1	75	93.631	ENSHBUG00000023860	gar1	79	93.631	Haplochromis_burtoni
ENSPMEG00000009320	gar1	51	94.393	ENSHGLG00000000493	GAR1	72	96.364	Heterocephalus_glaber_female
ENSPMEG00000009320	gar1	52	94.444	ENSHCOG00000008656	gar1	52	93.043	Hippocampus_comes
ENSPMEG00000009320	gar1	53	93.636	ENSIPUG00000003194	gar1	51	93.519	Ictalurus_punctatus
ENSPMEG00000009320	gar1	52	91.743	ENSSTOG00000005577	GAR1	71	94.545	Ictidomys_tridecemlineatus
ENSPMEG00000009320	gar1	53	95.495	ENSKMAG00000010402	gar1	51	96.296	Kryptolebias_marmoratus
ENSPMEG00000009320	gar1	58	86.777	ENSLACG00000003306	GAR1	64	87.736	Latimeria_chalumnae
ENSPMEG00000009320	gar1	52	81.481	ENSMFAG00000003572	-	52	81.308	Macaca_fascicularis
ENSPMEG00000009320	gar1	53	96.364	ENSMZEG00005001281	gar1	64	81.119	Maylandia_zebra
ENSPMEG00000009320	gar1	70	86.395	ENSMAUG00000016788	Gar1	70	96.364	Mesocricetus_auratus
ENSPMEG00000009320	gar1	70	85.034	ENSMOCG00000001340	Gar1	70	96.364	Microtus_ochrogaster
ENSPMEG00000009320	gar1	60	91.200	ENSMMOG00000004156	gar1	53	94.444	Mola_mola
ENSPMEG00000009320	gar1	51	97.196	ENSMALG00000009672	gar1	50	96.296	Monopterus_albus
ENSPMEG00000009320	gar1	82	85.714	MGP_CAROLIEiJ_G0025627	Gar1	70	96.364	Mus_caroli
ENSPMEG00000009320	gar1	82	84.667	ENSMUSG00000028010	Gar1	70	96.364	Mus_musculus
ENSPMEG00000009320	gar1	72	84.667	MGP_PahariEiJ_G0027076	Gar1	70	96.364	Mus_pahari
ENSPMEG00000009320	gar1	82	84.667	MGP_SPRETEiJ_G0026580	Gar1	70	96.364	Mus_spretus
ENSPMEG00000009320	gar1	51	93.458	ENSMPUG00000008615	GAR1	51	93.458	Mustela_putorius_furo
ENSPMEG00000009320	gar1	53	92.727	ENSNGAG00000008268	Gar1	71	94.545	Nannospalax_galili
ENSPMEG00000009320	gar1	53	92.727	ENSNLEG00000016578	GAR1	50	94.393	Nomascus_leucogenys
ENSPMEG00000009320	gar1	50	80.952	ENSNLEG00000034282	-	54	79.439	Nomascus_leucogenys
ENSPMEG00000009320	gar1	51	92.523	ENSODEG00000011083	GAR1	78	80.795	Octodon_degus
ENSPMEG00000009320	gar1	51	94.393	ENSOCUG00000003901	GAR1	50	94.393	Oryctolagus_cuniculus
ENSPMEG00000009320	gar1	51	94.393	ENSOGAG00000004693	GAR1	50	94.393	Otolemur_garnettii
ENSPMEG00000009320	gar1	51	93.458	ENSOARG00000004910	GAR1	51	93.458	Ovis_aries
ENSPMEG00000009320	gar1	51	94.393	ENSPPAG00000014081	GAR1	54	94.393	Pan_paniscus
ENSPMEG00000009320	gar1	51	93.458	ENSPPRG00000023697	GAR1	51	93.458	Panthera_pardus
ENSPMEG00000009320	gar1	51	93.458	ENSPTIG00000021565	GAR1	51	93.458	Panthera_tigris_altaica
ENSPMEG00000009320	gar1	53	92.727	ENSPTRG00000016364	GAR1	54	94.393	Pan_troglodytes
ENSPMEG00000009320	gar1	51	96.262	ENSPEMG00000015838	Gar1	70	96.364	Peromyscus_maniculatus_bairdii
ENSPMEG00000009320	gar1	100	98.578	ENSPFOG00000024155	gar1	100	98.578	Poecilia_formosa
ENSPMEG00000009320	gar1	100	98.578	ENSPLAG00000015056	gar1	100	98.578	Poecilia_latipinna
ENSPMEG00000009320	gar1	60	85.600	ENSPCOG00000027049	GAR1	60	93.162	Propithecus_coquereli
ENSPMEG00000009320	gar1	52	96.296	ENSRNOG00000061146	Gar1	63	96.262	Rattus_norvegicus
ENSPMEG00000009320	gar1	51	94.393	ENSRBIG00000019547	GAR1	54	94.393	Rhinopithecus_bieti
ENSPMEG00000009320	gar1	54	77.679	ENSRBIG00000042411	-	52	78.505	Rhinopithecus_bieti
ENSPMEG00000009320	gar1	53	92.727	ENSRROG00000028454	GAR1	54	94.393	Rhinopithecus_roxellana
ENSPMEG00000009320	gar1	54	77.679	ENSRROG00000044348	-	51	78.505	Rhinopithecus_roxellana
ENSPMEG00000009320	gar1	51	94.393	ENSSBOG00000024785	GAR1	50	94.393	Saimiri_boliviensis_boliviensis
ENSPMEG00000009320	gar1	50	92.308	ENSSHAG00000002161	GAR1	67	70.323	Sarcophilus_harrisii
ENSPMEG00000009320	gar1	52	93.519	ENSSMAG00000009976	gar1	50	93.519	Scophthalmus_maximus
ENSPMEG00000009320	gar1	52	96.296	ENSSLDG00000023264	gar1	51	96.296	Seriola_lalandi_dorsalis
ENSPMEG00000009320	gar1	51	93.396	ENSSPUG00000008707	GAR1	68	90.164	Sphenodon_punctatus
ENSPMEG00000009320	gar1	52	97.222	ENSSPAG00000005974	gar1	64	87.075	Stegastes_partitus
ENSPMEG00000009320	gar1	53	91.818	ENSSSCG00000009137	GAR1	53	93.458	Sus_scrofa
ENSPMEG00000009320	gar1	52	95.370	ENSTRUG00000020580	gar1	52	95.370	Takifugu_rubripes
ENSPMEG00000009320	gar1	50	98.095	ENSTNIG00000013023	gar1	61	98.148	Tetraodon_nigroviridis
ENSPMEG00000009320	gar1	50	93.269	ENSUAMG00000005652	GAR1	56	93.458	Ursus_americanus
ENSPMEG00000009320	gar1	51	93.458	ENSUMAG00000000776	GAR1	52	93.458	Ursus_maritimus
ENSPMEG00000009320	gar1	51	93.458	ENSVVUG00000017612	GAR1	55	93.458	Vulpes_vulpes
ENSPMEG00000009320	gar1	99	97.156	ENSXCOG00000014843	GAR1	90	97.156	Xiphophorus_couchianus
ENSPMEG00000009320	gar1	100	96.714	ENSXMAG00000002316	GAR1	90	96.714	Xiphophorus_maculatus