EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000009878 (Gene tree)
Gene ID: 106903884
Gene Symbol: -
Alias: -
Full Name: helicase ARIP4-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 62357 bases
Position: chrKQ552848.1:35327-97683
Accession: 106903884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000026305	ResIII	PF04851.15	9.6e-08	1	1
ENSPMEP00000008168	ResIII	PF04851.15	9.9e-08	1	1
ENSPMEP00000008160	ResIII	PF04851.15	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000002902	-	4701	XM_014967906	ENSPMEP00000026305	1491 (aa)	XP_014823392	UPI00072DF822
ENSPMET00000002939	-	4820	XM_014967909	ENSPMEP00000008160	1466 (aa)	XP_014823395	-
ENSPMET00000002915	-	5135	XM_014967910	ENSPMEP00000008168	1456 (aa)	XP_014823396	-

Gene Model

Click here to download ENSPMEG00000009878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000009878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000009878	-	95	61.861	ENSPMEG00000021535	rad54l2	95	60.041

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000009878	-	92	60.536	ENSG00000164080	RAD54L2	98	58.488	Homo_sapiens
ENSPMEG00000009878	-	100	81.604	ENSAPOG00000024141	-	100	81.873	Acanthochromis_polyacanthus
ENSPMEG00000009878	-	92	60.536	ENSAMEG00000009326	RAD54L2	91	60.043	Ailuropoda_melanoleuca
ENSPMEG00000009878	-	86	64.198	ENSACIG00000018079	rad54l2	92	62.855	Amphilophus_citrinellus
ENSPMEG00000009878	-	94	76.255	ENSACIG00000015932	-	100	76.040	Amphilophus_citrinellus
ENSPMEG00000009878	-	100	80.795	ENSAOCG00000022380	-	99	81.190	Amphiprion_ocellaris
ENSPMEG00000009878	-	100	78.581	ENSATEG00000006641	-	98	79.116	Anabas_testudineus
ENSPMEG00000009878	-	98	61.481	ENSATEG00000009346	rad54l2	96	60.228	Anabas_testudineus
ENSPMEG00000009878	-	99	59.586	ENSAPLG00000002121	RAD54L2	98	59.726	Anas_platyrhynchos
ENSPMEG00000009878	-	81	67.300	ENSACAG00000015883	RAD54L2	96	63.809	Anolis_carolinensis
ENSPMEG00000009878	-	92	60.275	ENSANAG00000025396	RAD54L2	91	59.711	Aotus_nancymaae
ENSPMEG00000009878	-	100	78.902	ENSACLG00000018296	-	100	79.451	Astatotilapia_calliptera
ENSPMEG00000009878	-	98	59.946	ENSACLG00000019111	rad54l2	96	60.107	Astatotilapia_calliptera
ENSPMEG00000009878	-	95	61.729	ENSAMXG00000013807	rad54l2	96	60.124	Astyanax_mexicanus
ENSPMEG00000009878	-	93	59.440	ENSBTAG00000032253	RAD54L2	85	63.405	Bos_taurus
ENSPMEG00000009878	-	92	60.637	ENSCJAG00000005575	RAD54L2	89	63.376	Callithrix_jacchus
ENSPMEG00000009878	-	93	59.640	ENSCAFG00000010120	RAD54L2	84	63.557	Canis_familiaris
ENSPMEG00000009878	-	93	59.640	ENSCAFG00020022320	RAD54L2	84	63.557	Canis_lupus_dingo
ENSPMEG00000009878	-	92	59.570	ENSCHIG00000008830	RAD54L2	93	58.411	Capra_hircus
ENSPMEG00000009878	-	92	60.246	ENSTSYG00000013200	RAD54L2	97	57.172	Carlito_syrichta
ENSPMEG00000009878	-	75	75.000	ENSCAPG00000016465	RAD54L2	91	59.666	Cavia_aperea
ENSPMEG00000009878	-	92	60.420	ENSCPOG00000005941	RAD54L2	94	58.890	Cavia_porcellus
ENSPMEG00000009878	-	80	60.732	ENSCCAG00000024465	RAD54L2	90	59.868	Cebus_capucinus
ENSPMEG00000009878	-	94	59.874	ENSCATG00000039891	RAD54L2	95	59.021	Cercocebus_atys
ENSPMEG00000009878	-	92	60.492	ENSCLAG00000008059	RAD54L2	97	56.769	Chinchilla_lanigera
ENSPMEG00000009878	-	92	60.879	ENSCSAG00000014027	RAD54L2	94	59.037	Chlorocebus_sabaeus
ENSPMEG00000009878	-	97	59.893	ENSCPBG00000016624	RAD54L2	98	59.785	Chrysemys_picta_bellii
ENSPMEG00000009878	-	70	50.384	ENSCING00000009208	-	95	50.047	Ciona_intestinalis
ENSPMEG00000009878	-	92	60.591	ENSCANG00000036093	RAD54L2	95	58.758	Colobus_angolensis_palliatus
ENSPMEG00000009878	-	93	60.058	ENSCGRG00000007921	Rad54l2	91	59.696	Cricetulus_griseus_crigri
ENSPMEG00000009878	-	98	57.700	ENSCSEG00000001740	rad54l2	96	57.220	Cynoglossus_semilaevis
ENSPMEG00000009878	-	87	75.606	ENSCSEG00000006115	-	100	74.012	Cynoglossus_semilaevis
ENSPMEG00000009878	-	96	60.897	ENSCVAG00000017887	rad54l2	95	59.780	Cyprinodon_variegatus
ENSPMEG00000009878	-	100	86.051	ENSCVAG00000005376	-	98	86.311	Cyprinodon_variegatus
ENSPMEG00000009878	-	95	63.255	ENSDARG00000063031	rad54l2	97	62.668	Danio_rerio
ENSPMEG00000009878	-	94	58.728	ENSDNOG00000017359	RAD54L2	97	58.456	Dasypus_novemcinctus
ENSPMEG00000009878	-	84	69.259	ENSDORG00000000651	Rad54l2	84	67.580	Dipodomys_ordii
ENSPMEG00000009878	-	69	51.786	FBgn0034976	CG4049	60	52.489	Drosophila_melanogaster
ENSPMEG00000009878	-	93	58.129	ENSETEG00000013290	RAD54L2	96	59.534	Echinops_telfairi
ENSPMEG00000009878	-	71	56.550	ENSEBUG00000001591	rad54l2	74	59.629	Eptatretus_burgeri
ENSPMEG00000009878	-	92	60.681	ENSEASG00005012868	RAD54L2	91	60.043	Equus_asinus_asinus
ENSPMEG00000009878	-	92	60.608	ENSECAG00000014759	RAD54L2	91	59.712	Equus_caballus
ENSPMEG00000009878	-	79	67.681	ENSEEUG00000001759	RAD54L2	76	67.681	Erinaceus_europaeus
ENSPMEG00000009878	-	97	68.550	ENSELUG00000011246	RAD54L2	97	68.248	Esox_lucius
ENSPMEG00000009878	-	92	60.463	ENSFCAG00000018563	RAD54L2	91	59.971	Felis_catus
ENSPMEG00000009878	-	83	65.730	ENSFALG00000008938	RAD54L2	98	63.037	Ficedula_albicollis
ENSPMEG00000009878	-	92	60.463	ENSFDAG00000017084	RAD54L2	94	58.931	Fukomys_damarensis
ENSPMEG00000009878	-	100	88.490	ENSFHEG00000017845	-	98	88.866	Fundulus_heteroclitus
ENSPMEG00000009878	-	95	61.905	ENSFHEG00000023241	rad54l2	95	59.946	Fundulus_heteroclitus
ENSPMEG00000009878	-	91	62.229	ENSGMOG00000010674	rad54l2	97	61.624	Gadus_morhua
ENSPMEG00000009878	-	95	61.061	ENSGALG00000003243	RAD54L2	97	58.761	Gallus_gallus
ENSPMEG00000009878	-	99	94.626	ENSGAFG00000002396	-	98	95.017	Gambusia_affinis
ENSPMEG00000009878	-	95	61.725	ENSGAFG00000021535	rad54l2	95	59.715	Gambusia_affinis
ENSPMEG00000009878	-	88	76.875	ENSGACG00000005642	-	100	76.875	Gasterosteus_aculeatus
ENSPMEG00000009878	-	95	60.993	ENSGACG00000001558	rad54l2	96	61.115	Gasterosteus_aculeatus
ENSPMEG00000009878	-	93	62.320	ENSGAGG00000020971	RAD54L2	96	61.727	Gopherus_agassizii
ENSPMEG00000009878	-	92	60.536	ENSGGOG00000010032	RAD54L2	92	59.654	Gorilla_gorilla
ENSPMEG00000009878	-	100	78.768	ENSHBUG00000018930	-	100	79.317	Haplochromis_burtoni
ENSPMEG00000009878	-	98	59.772	ENSHBUG00000012480	rad54l2	96	59.867	Haplochromis_burtoni
ENSPMEG00000009878	-	92	60.420	ENSHGLG00000012116	RAD54L2	97	56.769	Heterocephalus_glaber_female
ENSPMEG00000009878	-	92	60.420	ENSHGLG00100007205	RAD54L2	97	56.769	Heterocephalus_glaber_male
ENSPMEG00000009878	-	99	71.824	ENSHCOG00000006741	-	97	72.137	Hippocampus_comes
ENSPMEG00000009878	-	98	58.713	ENSHCOG00000007601	rad54l2	93	58.158	Hippocampus_comes
ENSPMEG00000009878	-	95	58.912	ENSIPUG00000019664	rad54l2	96	57.934	Ictalurus_punctatus
ENSPMEG00000009878	-	97	58.246	ENSIPUG00000024973	-	96	59.414	Ictalurus_punctatus
ENSPMEG00000009878	-	94	59.479	ENSSTOG00000010014	RAD54L2	97	57.441	Ictidomys_tridecemlineatus
ENSPMEG00000009878	-	94	59.590	ENSJJAG00000014332	Rad54l2	97	57.441	Jaculus_jaculus
ENSPMEG00000009878	-	99	58.548	ENSKMAG00000001976	rad54l2	94	60.956	Kryptolebias_marmoratus
ENSPMEG00000009878	-	99	82.353	ENSKMAG00000002931	-	98	82.167	Kryptolebias_marmoratus
ENSPMEG00000009878	-	95	60.805	ENSLBEG00000018779	rad54l2	95	58.690	Labrus_bergylta
ENSPMEG00000009878	-	87	77.467	ENSLBEG00000008534	-	98	78.492	Labrus_bergylta
ENSPMEG00000009878	-	99	56.444	ENSLACG00000016004	RAD54L2	97	56.581	Latimeria_chalumnae
ENSPMEG00000009878	-	72	72.625	ENSLOCG00000014222	rad54l2	99	72.462	Lepisosteus_oculatus
ENSPMEG00000009878	-	94	59.580	ENSLAFG00000005966	RAD54L2	90	60.263	Loxodonta_africana
ENSPMEG00000009878	-	92	60.879	ENSMFAG00000041836	RAD54L2	95	59.037	Macaca_fascicularis
ENSPMEG00000009878	-	92	60.879	ENSMMUG00000012002	RAD54L2	94	59.037	Macaca_mulatta
ENSPMEG00000009878	-	92	60.879	ENSMNEG00000035063	RAD54L2	96	59.037	Macaca_nemestrina
ENSPMEG00000009878	-	92	60.879	ENSMLEG00000034668	RAD54L2	95	59.037	Mandrillus_leucophaeus
ENSPMEG00000009878	-	98	59.546	ENSMAMG00000023761	rad54l2	97	66.255	Mastacembelus_armatus
ENSPMEG00000009878	-	100	77.658	ENSMAMG00000015321	-	100	78.197	Mastacembelus_armatus
ENSPMEG00000009878	-	100	78.835	ENSMZEG00005021308	-	100	79.384	Maylandia_zebra
ENSPMEG00000009878	-	98	60.040	ENSMZEG00005012584	rad54l2	97	60.123	Maylandia_zebra
ENSPMEG00000009878	-	95	61.006	ENSMGAG00000002911	RAD54L2	97	58.172	Meleagris_gallopavo
ENSPMEG00000009878	-	72	68.045	ENSMAUG00000011651	Rad54l2	99	65.333	Mesocricetus_auratus
ENSPMEG00000009878	-	95	59.525	ENSMICG00000002777	RAD54L2	86	63.940	Microcebus_murinus
ENSPMEG00000009878	-	95	58.733	ENSMOCG00000022448	Rad54l2	96	58.194	Microtus_ochrogaster
ENSPMEG00000009878	-	94	59.972	ENSMMOG00000021709	rad54l2	92	61.004	Mola_mola
ENSPMEG00000009878	-	94	75.771	ENSMMOG00000016901	-	99	75.627	Mola_mola
ENSPMEG00000009878	-	90	62.794	ENSMODG00000011850	RAD54L2	94	62.500	Monodelphis_domestica
ENSPMEG00000009878	-	85	77.147	ENSMALG00000015084	-	97	81.647	Monopterus_albus
ENSPMEG00000009878	-	94	59.351	MGP_CAROLIEiJ_G0032634	Rad54l2	94	58.638	Mus_caroli
ENSPMEG00000009878	-	94	59.351	ENSMUSG00000040661	Rad54l2	97	57.076	Mus_musculus
ENSPMEG00000009878	-	94	59.139	MGP_PahariEiJ_G0015502	Rad54l2	94	58.427	Mus_pahari
ENSPMEG00000009878	-	94	59.251	MGP_SPRETEiJ_G0033779	Rad54l2	94	58.538	Mus_spretus
ENSPMEG00000009878	-	94	59.322	ENSMPUG00000011865	RAD54L2	94	58.844	Mustela_putorius_furo
ENSPMEG00000009878	-	92	60.288	ENSMLUG00000004605	RAD54L2	97	57.912	Myotis_lucifugus
ENSPMEG00000009878	-	94	59.986	ENSNGAG00000015629	Rad54l2	97	57.708	Nannospalax_galili
ENSPMEG00000009878	-	95	60.965	ENSNBRG00000001937	rad54l2	88	64.757	Neolamprologus_brichardi
ENSPMEG00000009878	-	100	78.768	ENSNBRG00000022847	-	100	79.102	Neolamprologus_brichardi
ENSPMEG00000009878	-	92	60.536	ENSNLEG00000007038	RAD54L2	97	57.152	Nomascus_leucogenys
ENSPMEG00000009878	-	90	71.818	ENSMEUG00000009835	RAD54L2	93	71.636	Notamacropus_eugenii
ENSPMEG00000009878	-	92	60.319	ENSODEG00000018266	RAD54L2	94	58.316	Octodon_degus
ENSPMEG00000009878	-	98	61.073	ENSONIG00000014468	rad54l2	97	60.544	Oreochromis_niloticus
ENSPMEG00000009878	-	96	79.301	ENSONIG00000001663	-	98	79.498	Oreochromis_niloticus
ENSPMEG00000009878	-	95	60.302	ENSOANG00000012793	RAD54L2	97	59.211	Ornithorhynchus_anatinus
ENSPMEG00000009878	-	94	58.824	ENSOCUG00000017577	RAD54L2	94	58.514	Oryctolagus_cuniculus
ENSPMEG00000009878	-	99	76.626	ENSORLG00000002714	-	99	76.897	Oryzias_latipes
ENSPMEG00000009878	-	98	59.386	ENSORLG00000002276	rad54l2	97	58.208	Oryzias_latipes
ENSPMEG00000009878	-	97	59.781	ENSORLG00020003470	rad54l2	97	59.088	Oryzias_latipes_hni
ENSPMEG00000009878	-	99	76.558	ENSORLG00020019256	-	99	76.558	Oryzias_latipes_hni
ENSPMEG00000009878	-	97	59.739	ENSORLG00015021530	rad54l2	96	58.883	Oryzias_latipes_hsok
ENSPMEG00000009878	-	99	76.986	ENSORLG00015013408	-	99	76.818	Oryzias_latipes_hsok
ENSPMEG00000009878	-	97	59.538	ENSOMEG00000005597	rad54l2	95	58.322	Oryzias_melastigma
ENSPMEG00000009878	-	99	75.119	ENSOMEG00000008216	-	99	74.848	Oryzias_melastigma
ENSPMEG00000009878	-	77	61.565	ENSOGAG00000012442	RAD54L2	97	61.479	Otolemur_garnettii
ENSPMEG00000009878	-	92	59.626	ENSOARG00000007264	RAD54L2	91	59.541	Ovis_aries
ENSPMEG00000009878	-	92	60.536	ENSPPAG00000038472	RAD54L2	92	59.654	Pan_paniscus
ENSPMEG00000009878	-	92	60.463	ENSPPRG00000010212	RAD54L2	91	59.971	Panthera_pardus
ENSPMEG00000009878	-	92	60.463	ENSPTIG00000002240	RAD54L2	91	59.971	Panthera_tigris_altaica
ENSPMEG00000009878	-	92	60.536	ENSPTRG00000014974	RAD54L2	92	59.654	Pan_troglodytes
ENSPMEG00000009878	-	92	60.879	ENSPANG00000000857	RAD54L2	95	59.037	Papio_anubis
ENSPMEG00000009878	-	100	65.258	ENSPKIG00000001065	rad54l2	98	66.109	Paramormyrops_kingsleyae
ENSPMEG00000009878	-	68	71.373	ENSPSIG00000014346	RAD54L2	99	66.518	Pelodiscus_sinensis
ENSPMEG00000009878	-	86	62.421	ENSPMGG00000002208	rad54l2	95	63.501	Periophthalmus_magnuspinnatus
ENSPMEG00000009878	-	95	68.706	ENSPMGG00000000641	-	97	68.616	Periophthalmus_magnuspinnatus
ENSPMEG00000009878	-	94	59.309	ENSPEMG00000012051	Rad54l2	94	58.832	Peromyscus_maniculatus_bairdii
ENSPMEG00000009878	-	90	61.990	ENSPCIG00000018143	RAD54L2	92	63.860	Phascolarctos_cinereus
ENSPMEG00000009878	-	100	99.591	ENSPFOG00000000197	-	100	99.591	Poecilia_formosa
ENSPMEG00000009878	-	95	61.790	ENSPFOG00000018644	rad54l2	95	59.769	Poecilia_formosa
ENSPMEG00000009878	-	95	61.807	ENSPLAG00000006015	rad54l2	95	59.918	Poecilia_latipinna
ENSPMEG00000009878	-	100	98.364	ENSPLAG00000013908	-	100	98.364	Poecilia_latipinna
ENSPMEG00000009878	-	94	61.440	ENSPREG00000008628	rad54l2	96	62.584	Poecilia_reticulata
ENSPMEG00000009878	-	100	97.141	ENSPREG00000013377	RAD54L2	100	97.141	Poecilia_reticulata
ENSPMEG00000009878	-	92	60.536	ENSPPYG00000013831	RAD54L2	95	59.726	Pongo_abelii
ENSPMEG00000009878	-	75	60.311	ENSPCAG00000011952	RAD54L2	80	60.311	Procavia_capensis
ENSPMEG00000009878	-	98	58.373	ENSPCOG00000015983	RAD54L2	86	62.490	Propithecus_coquereli
ENSPMEG00000009878	-	94	60.916	ENSPNYG00000020693	rad54l2	88	65.323	Pundamilia_nyererei
ENSPMEG00000009878	-	100	78.768	ENSPNYG00000011435	-	100	79.317	Pundamilia_nyererei
ENSPMEG00000009878	-	100	63.282	ENSPNAG00000011583	-	97	64.561	Pygocentrus_nattereri
ENSPMEG00000009878	-	95	62.509	ENSPNAG00000006451	rad54l2	96	61.270	Pygocentrus_nattereri
ENSPMEG00000009878	-	94	56.135	ENSRNOG00000013570	Rad54l2	94	55.595	Rattus_norvegicus
ENSPMEG00000009878	-	70	66.507	ENSRNOG00000049489	LOC102552166	94	66.699	Rattus_norvegicus
ENSPMEG00000009878	-	92	60.591	ENSRBIG00000032434	RAD54L2	91	64.245	Rhinopithecus_bieti
ENSPMEG00000009878	-	92	60.591	ENSRROG00000042309	RAD54L2	93	59.713	Rhinopithecus_roxellana
ENSPMEG00000009878	-	94	59.257	ENSSBOG00000002139	RAD54L2	97	57.402	Saimiri_boliviensis_boliviensis
ENSPMEG00000009878	-	95	61.192	ENSSHAG00000008604	RAD54L2	98	59.472	Sarcophilus_harrisii
ENSPMEG00000009878	-	100	67.026	ENSSFOG00015019014	rad54l2	98	67.686	Scleropages_formosus
ENSPMEG00000009878	-	100	75.526	ENSSMAG00000009978	-	100	75.461	Scophthalmus_maximus
ENSPMEG00000009878	-	95	60.198	ENSSMAG00000020933	rad54l2	97	57.796	Scophthalmus_maximus
ENSPMEG00000009878	-	98	59.934	ENSSDUG00000014268	rad54l2	96	59.814	Seriola_dumerili
ENSPMEG00000009878	-	100	79.530	ENSSDUG00000016711	-	98	80.423	Seriola_dumerili
ENSPMEG00000009878	-	95	61.420	ENSSLDG00000023959	rad54l2	97	62.336	Seriola_lalandi_dorsalis
ENSPMEG00000009878	-	97	77.568	ENSSLDG00000023388	-	99	77.987	Seriola_lalandi_dorsalis
ENSPMEG00000009878	-	95	61.511	ENSSPAG00000016532	rad54l2	97	59.890	Stegastes_partitus
ENSPMEG00000009878	-	93	81.331	ENSSPAG00000006371	-	98	82.161	Stegastes_partitus
ENSPMEG00000009878	-	95	59.034	ENSSSCG00000011425	RAD54L2	91	59.754	Sus_scrofa
ENSPMEG00000009878	-	95	60.821	ENSTGUG00000004888	RAD54L2	97	58.788	Taeniopygia_guttata
ENSPMEG00000009878	-	95	60.998	ENSTRUG00000013962	rad54l2	97	58.891	Takifugu_rubripes
ENSPMEG00000009878	-	100	73.302	ENSTRUG00000011066	-	100	73.845	Takifugu_rubripes
ENSPMEG00000009878	-	76	75.982	ENSTNIG00000006049	-	100	75.804	Tetraodon_nigroviridis
ENSPMEG00000009878	-	75	69.837	ENSTNIG00000014694	rad54l2	99	67.410	Tetraodon_nigroviridis
ENSPMEG00000009878	-	86	59.470	ENSTBEG00000003377	RAD54L2	96	58.746	Tupaia_belangeri
ENSPMEG00000009878	-	92	60.463	ENSUAMG00000020891	RAD54L2	94	59.768	Ursus_americanus
ENSPMEG00000009878	-	92	60.683	ENSUMAG00000021678	RAD54L2	91	60.189	Ursus_maritimus
ENSPMEG00000009878	-	93	59.640	ENSVVUG00000026874	RAD54L2	87	63.557	Vulpes_vulpes
ENSPMEG00000009878	-	95	60.508	ENSXETG00000000070	rad54l2	87	64.411	Xenopus_tropicalis
ENSPMEG00000009878	-	97	90.078	ENSXCOG00000002848	-	100	89.794	Xiphophorus_couchianus
ENSPMEG00000009878	-	95	58.095	ENSXCOG00000004961	rad54l2	89	59.969	Xiphophorus_couchianus
ENSPMEG00000009878	-	95	61.380	ENSXMAG00000017182	rad54l2	95	62.594	Xiphophorus_maculatus
ENSPMEG00000009878	-	100	96.180	ENSXMAG00000019370	-	100	96.180	Xiphophorus_maculatus