EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000009977 (Gene tree)
Gene ID: 106929469
Gene Symbol: prpf6
Alias: -
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 12830 bases
Position: chrKQ552113.1:175560-188389
Accession: 106929469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000008204	PRP1_N	PF06424.12	1.8e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000002831	-	4608	XM_015006433	ENSPMEP00000008204	969 (aa)	XP_014861919	UPI00072EC3C8

Gene Model

Click here to download ENSPMEG00000009977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000009977's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000009977	prpf6	96	92.774	ENSG00000101161	PRPF6	100	92.349	Homo_sapiens
ENSPMEG00000009977	prpf6	100	97.523	ENSAPOG00000010395	prpf6	100	97.523	Acanthochromis_polyacanthus
ENSPMEG00000009977	prpf6	96	92.357	ENSAMEG00000001916	PRPF6	99	91.932	Ailuropoda_melanoleuca
ENSPMEG00000009977	prpf6	100	97.833	ENSACIG00000019862	prpf6	100	97.833	Amphilophus_citrinellus
ENSPMEG00000009977	prpf6	100	97.626	ENSAOCG00000012988	prpf6	100	97.626	Amphiprion_ocellaris
ENSPMEG00000009977	prpf6	96	91.505	ENSAPEG00000008301	prpf6	100	91.720	Amphiprion_percula
ENSPMEG00000009977	prpf6	100	97.214	ENSATEG00000005581	prpf6	100	97.214	Anabas_testudineus
ENSPMEG00000009977	prpf6	96	93.411	ENSACAG00000006464	PRPF6	95	92.986	Anolis_carolinensis
ENSPMEG00000009977	prpf6	96	92.774	ENSANAG00000012661	PRPF6	100	93.404	Aotus_nancymaae
ENSPMEG00000009977	prpf6	100	97.833	ENSACLG00000025875	prpf6	100	97.833	Astatotilapia_calliptera
ENSPMEG00000009977	prpf6	97	94.492	ENSAMXG00000001929	prpf6	100	92.828	Astyanax_mexicanus
ENSPMEG00000009977	prpf6	96	93.305	ENSBTAG00000011656	PRPF6	100	92.880	Bos_taurus
ENSPMEG00000009977	prpf6	96	92.774	ENSCJAG00000010616	PRPF6	100	92.349	Callithrix_jacchus
ENSPMEG00000009977	prpf6	96	93.411	ENSCAFG00000013165	PRPF6	100	92.986	Canis_familiaris
ENSPMEG00000009977	prpf6	96	93.411	ENSCAFG00020002050	PRPF6	100	92.986	Canis_lupus_dingo
ENSPMEG00000009977	prpf6	96	93.305	ENSCHIG00000018187	PRPF6	100	92.880	Capra_hircus
ENSPMEG00000009977	prpf6	96	93.411	ENSTSYG00000007814	PRPF6	100	92.986	Carlito_syrichta
ENSPMEG00000009977	prpf6	93	92.585	ENSCAPG00000015077	PRPF6	100	91.712	Cavia_aperea
ENSPMEG00000009977	prpf6	96	93.836	ENSCPOG00000007518	PRPF6	100	93.411	Cavia_porcellus
ENSPMEG00000009977	prpf6	96	89.692	ENSCCAG00000024564	PRPF6	100	89.267	Cebus_capucinus
ENSPMEG00000009977	prpf6	96	92.880	ENSCATG00000037473	PRPF6	100	92.455	Cercocebus_atys
ENSPMEG00000009977	prpf6	96	90.011	ENSCLAG00000003854	PRPF6	100	89.586	Chinchilla_lanigera
ENSPMEG00000009977	prpf6	96	88.279	ENSCSAG00000016742	PRPF6	100	87.856	Chlorocebus_sabaeus
ENSPMEG00000009977	prpf6	81	78.374	ENSCHOG00000003315	-	98	78.182	Choloepus_hoffmanni
ENSPMEG00000009977	prpf6	98	91.988	ENSCPBG00000013964	PRPF6	96	93.191	Chrysemys_picta_bellii
ENSPMEG00000009977	prpf6	96	72.622	ENSCING00000008817	-	99	72.199	Ciona_intestinalis
ENSPMEG00000009977	prpf6	96	92.667	ENSCANG00000038230	PRPF6	100	92.242	Colobus_angolensis_palliatus
ENSPMEG00000009977	prpf6	96	93.836	ENSCGRG00001022666	Prpf6	100	93.411	Cricetulus_griseus_chok1gshd
ENSPMEG00000009977	prpf6	96	92.258	ENSCSEG00000018561	prpf6	100	92.258	Cynoglossus_semilaevis
ENSPMEG00000009977	prpf6	100	97.833	ENSCVAG00000010550	prpf6	100	97.833	Cyprinodon_variegatus
ENSPMEG00000009977	prpf6	100	92.930	ENSDARG00000091367	prpf6	100	94.597	Danio_rerio
ENSPMEG00000009977	prpf6	96	92.774	ENSDNOG00000040544	PRPF6	100	92.455	Dasypus_novemcinctus
ENSPMEG00000009977	prpf6	87	92.874	ENSDORG00000005406	Prpf6	100	92.874	Dipodomys_ordii
ENSPMEG00000009977	prpf6	96	71.720	FBgn0036828	CG6841	99	71.828	Drosophila_melanogaster
ENSPMEG00000009977	prpf6	83	92.105	ENSETEG00000004447	PRPF6	85	92.105	Echinops_telfairi
ENSPMEG00000009977	prpf6	96	86.455	ENSEBUG00000008835	prpf6	100	86.032	Eptatretus_burgeri
ENSPMEG00000009977	prpf6	98	92.259	ENSEASG00005023115	PRPF6	100	93.092	Equus_asinus_asinus
ENSPMEG00000009977	prpf6	96	89.267	ENSECAG00000013983	PRPF6	100	88.842	Equus_caballus
ENSPMEG00000009977	prpf6	86	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSPMEG00000009977	prpf6	97	94.698	ENSELUG00000001945	prpf6	94	94.698	Esox_lucius
ENSPMEG00000009977	prpf6	96	93.411	ENSFCAG00000001183	PRPF6	100	92.986	Felis_catus
ENSPMEG00000009977	prpf6	99	85.346	ENSFALG00000006046	-	97	87.407	Ficedula_albicollis
ENSPMEG00000009977	prpf6	96	93.333	ENSFALG00000010326	-	98	93.016	Ficedula_albicollis
ENSPMEG00000009977	prpf6	96	92.349	ENSFDAG00000006451	PRPF6	100	93.084	Fukomys_damarensis
ENSPMEG00000009977	prpf6	100	98.142	ENSFHEG00000000560	prpf6	100	98.142	Fundulus_heteroclitus
ENSPMEG00000009977	prpf6	97	94.062	ENSGMOG00000015622	prpf6	99	93.531	Gadus_morhua
ENSPMEG00000009977	prpf6	96	93.411	ENSGALG00000006001	PRPF6	100	93.092	Gallus_gallus
ENSPMEG00000009977	prpf6	100	94.634	ENSGAFG00000021109	prpf6	100	94.634	Gambusia_affinis
ENSPMEG00000009977	prpf6	97	95.975	ENSGACG00000002576	prpf6	100	95.975	Gasterosteus_aculeatus
ENSPMEG00000009977	prpf6	98	92.188	ENSGAGG00000008653	PRPF6	96	93.298	Gopherus_agassizii
ENSPMEG00000009977	prpf6	96	92.774	ENSGGOG00000016876	PRPF6	100	92.349	Gorilla_gorilla
ENSPMEG00000009977	prpf6	100	97.833	ENSHBUG00000004496	prpf6	100	97.833	Haplochromis_burtoni
ENSPMEG00000009977	prpf6	96	93.730	ENSHGLG00000009222	PRPF6	100	93.305	Heterocephalus_glaber_female
ENSPMEG00000009977	prpf6	93	93.675	ENSHGLG00100016600	PRPF6	100	93.239	Heterocephalus_glaber_male
ENSPMEG00000009977	prpf6	100	95.666	ENSHCOG00000011513	prpf6	100	95.666	Hippocampus_comes
ENSPMEG00000009977	prpf6	100	92.608	ENSIPUG00000004912	prpf6	100	92.608	Ictalurus_punctatus
ENSPMEG00000009977	prpf6	96	91.295	ENSSTOG00000002922	PRPF6	100	90.446	Ictidomys_tridecemlineatus
ENSPMEG00000009977	prpf6	96	93.836	ENSJJAG00000000836	Prpf6	100	93.411	Jaculus_jaculus
ENSPMEG00000009977	prpf6	100	97.523	ENSKMAG00000017800	prpf6	100	97.523	Kryptolebias_marmoratus
ENSPMEG00000009977	prpf6	100	96.388	ENSLBEG00000012582	prpf6	100	96.388	Labrus_bergylta
ENSPMEG00000009977	prpf6	96	94.468	ENSLOCG00000004827	prpf6	96	92.660	Lepisosteus_oculatus
ENSPMEG00000009977	prpf6	96	92.880	ENSLAFG00000005272	PRPF6	100	92.455	Loxodonta_africana
ENSPMEG00000009977	prpf6	96	92.667	ENSMFAG00000037542	PRPF6	100	92.242	Macaca_fascicularis
ENSPMEG00000009977	prpf6	96	86.412	ENSMMUG00000015558	PRPF6	98	93.934	Macaca_mulatta
ENSPMEG00000009977	prpf6	96	80.297	ENSMNEG00000045555	PRPF6	100	79.873	Macaca_nemestrina
ENSPMEG00000009977	prpf6	100	97.214	ENSMAMG00000010718	prpf6	100	97.214	Mastacembelus_armatus
ENSPMEG00000009977	prpf6	90	98.057	ENSMZEG00005026539	prpf6	100	98.057	Maylandia_zebra
ENSPMEG00000009977	prpf6	97	98.081	ENSMZEG00005015261	-	100	98.081	Maylandia_zebra
ENSPMEG00000009977	prpf6	93	93.566	ENSMGAG00000006634	PRPF6	100	93.239	Meleagris_gallopavo
ENSPMEG00000009977	prpf6	96	93.836	ENSMAUG00000013969	Prpf6	100	93.411	Mesocricetus_auratus
ENSPMEG00000009977	prpf6	84	92.579	ENSMICG00000017793	PRPF6	98	92.602	Microcebus_murinus
ENSPMEG00000009977	prpf6	96	93.730	ENSMOCG00000001701	Prpf6	100	93.305	Microtus_ochrogaster
ENSPMEG00000009977	prpf6	96	97.312	ENSMMOG00000020419	prpf6	100	97.312	Mola_mola
ENSPMEG00000009977	prpf6	93	94.575	ENSMODG00000017051	PRPF6	99	94.081	Monodelphis_domestica
ENSPMEG00000009977	prpf6	95	97.717	ENSMALG00000000089	prpf6	100	97.717	Monopterus_albus
ENSPMEG00000009977	prpf6	96	87.566	MGP_CAROLIEiJ_G0024814	Prpf6	100	96.296	Mus_caroli
ENSPMEG00000009977	prpf6	96	93.836	ENSMUSG00000002455	Prpf6	100	96.296	Mus_musculus
ENSPMEG00000009977	prpf6	96	93.836	MGP_PahariEiJ_G0026262	Prpf6	100	96.296	Mus_pahari
ENSPMEG00000009977	prpf6	96	93.836	MGP_SPRETEiJ_G0025741	Prpf6	100	96.296	Mus_spretus
ENSPMEG00000009977	prpf6	86	93.439	ENSMPUG00000008673	PRPF6	98	93.439	Mustela_putorius_furo
ENSPMEG00000009977	prpf6	96	93.943	ENSNGAG00000003365	Prpf6	100	93.518	Nannospalax_galili
ENSPMEG00000009977	prpf6	100	97.936	ENSNBRG00000015025	prpf6	100	97.936	Neolamprologus_brichardi
ENSPMEG00000009977	prpf6	96	92.667	ENSNLEG00000010208	PRPF6	100	92.242	Nomascus_leucogenys
ENSPMEG00000009977	prpf6	96	84.337	ENSMEUG00000009824	-	90	84.585	Notamacropus_eugenii
ENSPMEG00000009977	prpf6	96	87.885	ENSODEG00000004841	PRPF6	100	87.460	Octodon_degus
ENSPMEG00000009977	prpf6	100	97.626	ENSONIG00000017406	prpf6	100	97.626	Oreochromis_niloticus
ENSPMEG00000009977	prpf6	96	93.624	ENSOANG00000004920	PRPF6	100	93.199	Ornithorhynchus_anatinus
ENSPMEG00000009977	prpf6	95	91.524	ENSOCUG00000014151	PRPF6	100	91.094	Oryctolagus_cuniculus
ENSPMEG00000009977	prpf6	100	96.698	ENSORLG00000009592	prpf6	100	96.698	Oryzias_latipes
ENSPMEG00000009977	prpf6	100	96.801	ENSORLG00020001458	prpf6	100	96.801	Oryzias_latipes_hni
ENSPMEG00000009977	prpf6	100	96.801	ENSORLG00015018762	prpf6	100	96.801	Oryzias_latipes_hsok
ENSPMEG00000009977	prpf6	100	97.110	ENSOMEG00000012174	prpf6	100	97.110	Oryzias_melastigma
ENSPMEG00000009977	prpf6	96	86.518	ENSOGAG00000007573	PRPF6	100	86.093	Otolemur_garnettii
ENSPMEG00000009977	prpf6	96	92.880	ENSOARG00000008776	PRPF6	99	92.455	Ovis_aries
ENSPMEG00000009977	prpf6	96	92.774	ENSPPAG00000008686	PRPF6	100	92.349	Pan_paniscus
ENSPMEG00000009977	prpf6	96	93.411	ENSPPRG00000008497	PRPF6	100	92.986	Panthera_pardus
ENSPMEG00000009977	prpf6	93	93.348	ENSPTIG00000011184	PRPF6	97	92.912	Panthera_tigris_altaica
ENSPMEG00000009977	prpf6	96	92.774	ENSPTRG00000013765	PRPF6	100	92.349	Pan_troglodytes
ENSPMEG00000009977	prpf6	96	92.455	ENSPANG00000024135	PRPF6	100	92.030	Papio_anubis
ENSPMEG00000009977	prpf6	96	95.106	ENSPKIG00000005627	prpf6	99	94.681	Paramormyrops_kingsleyae
ENSPMEG00000009977	prpf6	90	93.311	ENSPSIG00000007717	PRPF6	100	92.857	Pelodiscus_sinensis
ENSPMEG00000009977	prpf6	99	94.731	ENSPMGG00000008925	prpf6	99	94.008	Periophthalmus_magnuspinnatus
ENSPMEG00000009977	prpf6	96	93.836	ENSPEMG00000016036	Prpf6	100	93.411	Peromyscus_maniculatus_bairdii
ENSPMEG00000009977	prpf6	98	87.461	ENSPMAG00000006144	prpf6	100	88.093	Petromyzon_marinus
ENSPMEG00000009977	prpf6	96	93.730	ENSPCIG00000017909	PRPF6	100	93.305	Phascolarctos_cinereus
ENSPMEG00000009977	prpf6	100	98.773	ENSPFOG00000006431	prpf6	99	98.773	Poecilia_formosa
ENSPMEG00000009977	prpf6	100	99.587	ENSPLAG00000005974	prpf6	100	99.587	Poecilia_latipinna
ENSPMEG00000009977	prpf6	100	99.484	ENSPREG00000017993	prpf6	95	99.484	Poecilia_reticulata
ENSPMEG00000009977	prpf6	96	92.242	ENSPPYG00000011256	PRPF6	100	91.817	Pongo_abelii
ENSPMEG00000009977	prpf6	91	95.425	ENSPCAG00000006536	PRPF6	88	95.425	Procavia_capensis
ENSPMEG00000009977	prpf6	96	92.986	ENSPCOG00000016881	PRPF6	100	92.561	Propithecus_coquereli
ENSPMEG00000009977	prpf6	96	87.460	ENSPVAG00000014316	PRPF6	100	87.035	Pteropus_vampyrus
ENSPMEG00000009977	prpf6	100	83.778	ENSPNYG00000001939	prpf6	100	83.778	Pundamilia_nyererei
ENSPMEG00000009977	prpf6	97	95.233	ENSPNAG00000015606	prpf6	100	93.340	Pygocentrus_nattereri
ENSPMEG00000009977	prpf6	96	93.730	ENSRNOG00000051498	Prpf6	100	93.305	Rattus_norvegicus
ENSPMEG00000009977	prpf6	96	92.667	ENSRBIG00000043613	PRPF6	100	92.242	Rhinopithecus_bieti
ENSPMEG00000009977	prpf6	96	89.630	ENSRROG00000040969	PRPF6	98	92.561	Rhinopithecus_roxellana
ENSPMEG00000009977	prpf6	87	90.088	ENSSBOG00000020632	PRPF6	93	87.889	Saimiri_boliviensis_boliviensis
ENSPMEG00000009977	prpf6	96	93.730	ENSSHAG00000016810	PRPF6	100	93.305	Sarcophilus_harrisii
ENSPMEG00000009977	prpf6	95	95.054	ENSSFOG00015020859	prpf6	100	94.624	Scleropages_formosus
ENSPMEG00000009977	prpf6	100	95.872	ENSSMAG00000008112	prpf6	100	95.872	Scophthalmus_maximus
ENSPMEG00000009977	prpf6	100	97.110	ENSSDUG00000016142	prpf6	100	97.110	Seriola_dumerili
ENSPMEG00000009977	prpf6	100	97.110	ENSSLDG00000025283	prpf6	99	97.110	Seriola_lalandi_dorsalis
ENSPMEG00000009977	prpf6	90	92.281	ENSSPUG00000018260	PRPF6	100	91.827	Sphenodon_punctatus
ENSPMEG00000009977	prpf6	100	97.214	ENSSPAG00000015850	prpf6	100	97.214	Stegastes_partitus
ENSPMEG00000009977	prpf6	97	91.937	ENSSSCG00000029119	PRPF6	98	92.841	Sus_scrofa
ENSPMEG00000009977	prpf6	96	93.432	ENSTGUG00000007221	PRPF6	100	93.114	Taeniopygia_guttata
ENSPMEG00000009977	prpf6	100	96.285	ENSTRUG00000002920	prpf6	100	96.285	Takifugu_rubripes
ENSPMEG00000009977	prpf6	96	90.117	ENSTNIG00000017873	prpf6	100	90.117	Tetraodon_nigroviridis
ENSPMEG00000009977	prpf6	85	94.444	ENSTBEG00000005348	PRPF6	85	92.222	Tupaia_belangeri
ENSPMEG00000009977	prpf6	96	93.092	ENSTTRG00000013068	PRPF6	100	92.667	Tursiops_truncatus
ENSPMEG00000009977	prpf6	98	88.866	ENSUMAG00000021631	PRPF6	98	91.494	Ursus_maritimus
ENSPMEG00000009977	prpf6	96	93.411	ENSVVUG00000014948	PRPF6	100	92.986	Vulpes_vulpes
ENSPMEG00000009977	prpf6	96	92.872	ENSXETG00000012054	prpf6	97	92.447	Xenopus_tropicalis
ENSPMEG00000009977	prpf6	100	99.690	ENSXCOG00000008082	prpf6	100	99.690	Xiphophorus_couchianus
ENSPMEG00000009977	prpf6	100	99.587	ENSXMAG00000015581	prpf6	100	99.587	Xiphophorus_maculatus