EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000010299 (Gene tree)
Gene ID: -
Gene Symbol: casc3
Alias: -
Full Name: casc3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 8631 bases
Position: chrKQ554433.1:4036-12666
Accession: ZDB-GENE-040308-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000008527	Btz	PF09405.10	2.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000002287	-	1755	-	ENSPMEP00000008527	584 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000010299's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000010299's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000010299	casc3	73	48.451	ENSG00000108349	CASC3	61	67.143	Homo_sapiens
ENSPMEG00000010299	casc3	68	89.474	ENSAPOG00000008467	casc3	55	78.698	Acanthochromis_polyacanthus
ENSPMEG00000010299	casc3	73	48.559	ENSAMEG00000007764	CASC3	68	47.541	Ailuropoda_melanoleuca
ENSPMEG00000010299	casc3	93	66.909	ENSACIG00000000720	casc3	84	68.953	Amphilophus_citrinellus
ENSPMEG00000010299	casc3	82	87.500	ENSAOCG00000016676	casc3	64	87.500	Amphiprion_ocellaris
ENSPMEG00000010299	casc3	82	89.062	ENSAPEG00000006787	casc3	64	89.062	Amphiprion_percula
ENSPMEG00000010299	casc3	56	89.062	ENSATEG00000017196	casc3	61	89.062	Anabas_testudineus
ENSPMEG00000010299	casc3	73	45.022	ENSACAG00000002674	CASC3	60	43.805	Anolis_carolinensis
ENSPMEG00000010299	casc3	80	42.157	ENSANAG00000034820	-	68	43.579	Aotus_nancymaae
ENSPMEG00000010299	casc3	68	87.407	ENSACLG00000016198	casc3	56	78.363	Astatotilapia_calliptera
ENSPMEG00000010299	casc3	79	46.988	ENSBTAG00000006250	CASC3	68	46.559	Bos_taurus
ENSPMEG00000010299	casc3	73	47.817	ENSCJAG00000016032	CASC3	63	48.035	Callithrix_jacchus
ENSPMEG00000010299	casc3	73	49.115	ENSCAFG00000016141	CASC3	68	47.239	Canis_familiaris
ENSPMEG00000010299	casc3	73	49.115	ENSCAFG00020018882	CASC3	68	47.239	Canis_lupus_dingo
ENSPMEG00000010299	casc3	73	47.174	ENSCHIG00000006338	CASC3	68	46.154	Capra_hircus
ENSPMEG00000010299	casc3	73	49.115	ENSTSYG00000002975	CASC3	68	47.368	Carlito_syrichta
ENSPMEG00000010299	casc3	79	45.749	ENSCAPG00000010514	CASC3	78	47.035	Cavia_aperea
ENSPMEG00000010299	casc3	79	46.680	ENSCPOG00000015139	CASC3	69	46.830	Cavia_porcellus
ENSPMEG00000010299	casc3	73	47.609	ENSCCAG00000033620	CASC3	68	46.263	Cebus_capucinus
ENSPMEG00000010299	casc3	73	47.020	ENSCATG00000033593	CASC3	68	47.347	Cercocebus_atys
ENSPMEG00000010299	casc3	73	48.673	ENSCLAG00000013730	CASC3	68	47.667	Chinchilla_lanigera
ENSPMEG00000010299	casc3	73	47.020	ENSCSAG00000002777	CASC3	68	47.347	Chlorocebus_sabaeus
ENSPMEG00000010299	casc3	92	42.834	ENSCPBG00000004750	CASC3	68	45.898	Chrysemys_picta_bellii
ENSPMEG00000010299	casc3	73	47.461	ENSCANG00000008814	CASC3	68	46.939	Colobus_angolensis_palliatus
ENSPMEG00000010299	casc3	73	49.123	ENSCGRG00001014706	Casc3	63	48.552	Cricetulus_griseus_chok1gshd
ENSPMEG00000010299	casc3	92	43.979	ENSCGRG00000001952	Casc3	74	47.035	Cricetulus_griseus_crigri
ENSPMEG00000010299	casc3	79	82.143	ENSCSEG00000010047	casc3	50	82.143	Cynoglossus_semilaevis
ENSPMEG00000010299	casc3	76	95.312	ENSCVAG00000014935	casc3	62	95.312	Cyprinodon_variegatus
ENSPMEG00000010299	casc3	79	46.076	ENSDNOG00000017249	CASC3	65	46.012	Dasypus_novemcinctus
ENSPMEG00000010299	casc3	73	45.011	ENSETEG00000013720	CASC3	68	43.648	Echinops_telfairi
ENSPMEG00000010299	casc3	79	48.203	ENSEASG00005002909	CASC3	68	46.964	Equus_asinus_asinus
ENSPMEG00000010299	casc3	73	48.472	ENSECAG00000019947	CASC3	60	46.964	Equus_caballus
ENSPMEG00000010299	casc3	60	43.272	ENSEEUG00000014253	CASC3	71	42.971	Erinaceus_europaeus
ENSPMEG00000010299	casc3	79	46.138	ENSFCAG00000014998	CASC3	68	47.035	Felis_catus
ENSPMEG00000010299	casc3	73	45.064	ENSFALG00000000412	CASC3	68	46.035	Ficedula_albicollis
ENSPMEG00000010299	casc3	73	48.018	ENSFDAG00000020696	CASC3	74	46.421	Fukomys_damarensis
ENSPMEG00000010299	casc3	72	87.952	ENSFHEG00000015793	casc3	56	87.574	Fundulus_heteroclitus
ENSPMEG00000010299	casc3	73	47.826	ENSGALG00000031813	CASC3	67	45.475	Gallus_gallus
ENSPMEG00000010299	casc3	79	96.350	ENSGAFG00000017148	casc3	56	95.858	Gambusia_affinis
ENSPMEG00000010299	casc3	73	46.957	ENSGAGG00000008432	CASC3	67	45.833	Gopherus_agassizii
ENSPMEG00000010299	casc3	98	41.757	ENSGGOG00000005067	CASC3	68	47.035	Gorilla_gorilla
ENSPMEG00000010299	casc3	73	47.991	ENSHGLG00000012117	CASC3	63	48.884	Heterocephalus_glaber_female
ENSPMEG00000010299	casc3	73	47.991	ENSHGLG00100002268	CASC3	70	48.884	Heterocephalus_glaber_male
ENSPMEG00000010299	casc3	85	65.152	ENSHCOG00000002664	casc3	65	53.333	Hippocampus_comes
ENSPMEG00000010299	casc3	73	49.007	ENSSTOG00000006374	CASC3	68	46.421	Ictidomys_tridecemlineatus
ENSPMEG00000010299	casc3	76	46.025	ENSJJAG00000023525	Casc3	68	45.582	Jaculus_jaculus
ENSPMEG00000010299	casc3	73	85.380	ENSKMAG00000019507	casc3	86	59.418	Kryptolebias_marmoratus
ENSPMEG00000010299	casc3	73	75.862	ENSLBEG00000005435	casc3	50	87.050	Labrus_bergylta
ENSPMEG00000010299	casc3	70	41.244	ENSLACG00000013200	CASC3	59	40.416	Latimeria_chalumnae
ENSPMEG00000010299	casc3	73	46.239	ENSLAFG00000000606	CASC3	68	45.399	Loxodonta_africana
ENSPMEG00000010299	casc3	79	46.723	ENSMFAG00000041496	CASC3	68	47.347	Macaca_fascicularis
ENSPMEG00000010299	casc3	73	47.020	ENSMMUG00000045187	CASC3	68	47.347	Macaca_mulatta
ENSPMEG00000010299	casc3	73	47.020	ENSMLEG00000029049	CASC3	76	47.347	Mandrillus_leucophaeus
ENSPMEG00000010299	casc3	67	86.232	ENSMAMG00000005235	casc3	51	86.232	Mastacembelus_armatus
ENSPMEG00000010299	casc3	68	87.407	ENSMZEG00005003815	casc3	56	78.363	Maylandia_zebra
ENSPMEG00000010299	casc3	74	46.467	ENSMGAG00000013247	CASC3	72	46.405	Meleagris_gallopavo
ENSPMEG00000010299	casc3	64	44.608	ENSMAUG00000006023	Casc3	62	44.081	Mesocricetus_auratus
ENSPMEG00000010299	casc3	73	47.277	ENSMICG00000003321	CASC3	68	45.492	Microcebus_murinus
ENSPMEG00000010299	casc3	79	46.976	ENSMOCG00000013644	Casc3	69	46.707	Microtus_ochrogaster
ENSPMEG00000010299	casc3	83	84.615	ENSMMOG00000014339	casc3	50	90.826	Mola_mola
ENSPMEG00000010299	casc3	73	44.371	ENSMODG00000013044	CASC3	58	45.067	Monodelphis_domestica
ENSPMEG00000010299	casc3	87	60.308	ENSMALG00000019771	casc3	79	61.612	Monopterus_albus
ENSPMEG00000010299	casc3	73	49.119	MGP_CAROLIEiJ_G0017099	Casc3	68	47.648	Mus_caroli
ENSPMEG00000010299	casc3	73	49.667	ENSMUSG00000078676	Casc3	68	47.773	Mus_musculus
ENSPMEG00000010299	casc3	73	49.446	MGP_SPRETEiJ_G0017943	Casc3	68	47.571	Mus_spretus
ENSPMEG00000010299	casc3	79	46.559	ENSMPUG00000014903	CASC3	68	46.721	Mustela_putorius_furo
ENSPMEG00000010299	casc3	79	45.600	ENSMLUG00000010520	CASC3	68	45.418	Myotis_lucifugus
ENSPMEG00000010299	casc3	73	49.558	ENSNGAG00000023121	Casc3	65	49.007	Nannospalax_galili
ENSPMEG00000010299	casc3	73	48.667	ENSNLEG00000001598	CASC3	69	47.239	Nomascus_leucogenys
ENSPMEG00000010299	casc3	59	61.616	ENSMEUG00000015662	CASC3	61	63.366	Notamacropus_eugenii
ENSPMEG00000010299	casc3	60	44.355	ENSOPRG00000007240	-	53	44.173	Ochotona_princeps
ENSPMEG00000010299	casc3	73	48.009	ENSODEG00000017858	CASC3	63	48.571	Octodon_degus
ENSPMEG00000010299	casc3	93	64.716	ENSONIG00000009337	casc3	86	65.695	Oreochromis_niloticus
ENSPMEG00000010299	casc3	73	47.912	ENSOCUG00000002954	CASC3	68	47.035	Oryctolagus_cuniculus
ENSPMEG00000010299	casc3	73	47.241	ENSOGAG00000034486	CASC3	68	45.325	Otolemur_garnettii
ENSPMEG00000010299	casc3	79	46.000	ENSOARG00000013239	CASC3	68	46.356	Ovis_aries
ENSPMEG00000010299	casc3	73	48.451	ENSPPAG00000035069	CASC3	68	47.035	Pan_paniscus
ENSPMEG00000010299	casc3	79	46.138	ENSPPRG00000023670	CASC3	68	47.035	Panthera_pardus
ENSPMEG00000010299	casc3	79	45.455	ENSPTIG00000010891	CASC3	68	46.626	Panthera_tigris_altaica
ENSPMEG00000010299	casc3	73	46.696	ENSPANG00000021708	CASC3	68	47.347	Papio_anubis
ENSPMEG00000010299	casc3	73	47.912	ENSPEMG00000009774	Casc3	69	46.012	Peromyscus_maniculatus_bairdii
ENSPMEG00000010299	casc3	73	44.027	ENSPCIG00000025678	CASC3	63	46.667	Phascolarctos_cinereus
ENSPMEG00000010299	casc3	93	70.940	ENSPFOG00000017632	casc3	87	72.337	Poecilia_formosa
ENSPMEG00000010299	casc3	93	91.026	ENSPREG00000011856	casc3	86	90.842	Poecilia_reticulata
ENSPMEG00000010299	casc3	73	49.778	ENSPPYG00000008467	CASC3	68	47.844	Pongo_abelii
ENSPMEG00000010299	casc3	73	47.556	ENSPCOG00000008183	CASC3	68	45.902	Propithecus_coquereli
ENSPMEG00000010299	casc3	73	46.681	ENSPVAG00000008556	CASC3	68	46.311	Pteropus_vampyrus
ENSPMEG00000010299	casc3	68	88.889	ENSPNYG00000011962	casc3	56	79.532	Pundamilia_nyererei
ENSPMEG00000010299	casc3	79	47.193	ENSRNOG00000009716	Casc3	65	46.849	Rattus_norvegicus
ENSPMEG00000010299	casc3	79	45.639	ENSRBIG00000033289	CASC3	69	47.143	Rhinopithecus_bieti
ENSPMEG00000010299	casc3	73	47.020	ENSRROG00000022337	CASC3	69	47.143	Rhinopithecus_roxellana
ENSPMEG00000010299	casc3	73	47.930	ENSSBOG00000031406	CASC3	76	45.984	Saimiri_boliviensis_boliviensis
ENSPMEG00000010299	casc3	81	43.912	ENSSHAG00000013338	CASC3	78	44.711	Sarcophilus_harrisii
ENSPMEG00000010299	casc3	67	81.560	ENSSMAG00000016096	casc3	51	80.690	Scophthalmus_maximus
ENSPMEG00000010299	casc3	76	92.727	ENSSLDG00000020308	casc3	86	71.480	Seriola_lalandi_dorsalis
ENSPMEG00000010299	casc3	69	72.000	ENSSARG00000010378	CASC3	55	72.000	Sorex_araneus
ENSPMEG00000010299	casc3	73	46.903	ENSSSCG00000017477	CASC3	76	44.625	Sus_scrofa
ENSPMEG00000010299	casc3	68	45.131	ENSTGUG00000002300	CASC3	86	43.413	Taeniopygia_guttata
ENSPMEG00000010299	casc3	67	83.704	ENSTRUG00000000673	casc3	51	81.250	Takifugu_rubripes
ENSPMEG00000010299	casc3	74	61.388	ENSTNIG00000003208	casc3	87	55.184	Tetraodon_nigroviridis
ENSPMEG00000010299	casc3	62	76.000	ENSTTRG00000016896	CASC3	62	76.000	Tursiops_truncatus
ENSPMEG00000010299	casc3	79	47.780	ENSUAMG00000015116	CASC3	68	47.239	Ursus_americanus
ENSPMEG00000010299	casc3	73	48.730	ENSUMAG00000017697	CASC3	71	47.696	Ursus_maritimus
ENSPMEG00000010299	casc3	73	47.566	ENSVVUG00000000997	CASC3	68	46.830	Vulpes_vulpes
ENSPMEG00000010299	casc3	75	42.733	ENSXETG00000024395	casc3	65	42.675	Xenopus_tropicalis
ENSPMEG00000010299	casc3	68	96.350	ENSXMAG00000013937	casc3	64	95.266	Xiphophorus_maculatus