EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000010413 (Gene tree)
Gene ID: 106927416
Gene Symbol: dkc1
Alias: -
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 11741 bases
Position: chrKQ551931.1:197632-209372
Accession: 106927416
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000008657	TruB_N	PF01509.18	5.9e-21	1	1
ENSPMEP00000008657	PUA	PF01472.20	5.6e-17	1	1
ENSPMEP00000008657	DKCLD	PF08068.12	6.5e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000002080	-	5866	XM_015002963	ENSPMEP00000008657	500 (aa)	XP_014858449	UPI00072DDB73

Gene Model

Click here to download ENSPMEG00000010413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000010413's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000010413	dkc1	86	80.952	ENSG00000130826	DKC1	99	87.805	Homo_sapiens
ENSPMEG00000010413	dkc1	97	87.755	ENSAPOG00000007799	dkc1	89	89.823	Acanthochromis_polyacanthus
ENSPMEG00000010413	dkc1	85	81.693	ENSAMEG00000002776	DKC1	86	81.693	Ailuropoda_melanoleuca
ENSPMEG00000010413	dkc1	93	88.578	ENSACIG00000022614	dkc1	87	90.278	Amphilophus_citrinellus
ENSPMEG00000010413	dkc1	97	87.143	ENSAOCG00000013159	dkc1	88	90.509	Amphiprion_ocellaris
ENSPMEG00000010413	dkc1	97	87.143	ENSAPEG00000002284	dkc1	88	90.509	Amphiprion_percula
ENSPMEG00000010413	dkc1	93	86.837	ENSATEG00000013682	dkc1	86	87.982	Anabas_testudineus
ENSPMEG00000010413	dkc1	86	82.151	ENSACAG00000015600	DKC1	75	82.151	Anolis_carolinensis
ENSPMEG00000010413	dkc1	86	80.952	ENSANAG00000022732	DKC1	86	80.952	Aotus_nancymaae
ENSPMEG00000010413	dkc1	92	87.905	ENSACLG00000015605	dkc1	88	89.376	Astatotilapia_calliptera
ENSPMEG00000010413	dkc1	90	85.275	ENSAMXG00000017108	dkc1	85	87.037	Astyanax_mexicanus
ENSPMEG00000010413	dkc1	85	81.050	ENSBTAG00000013045	DKC1	88	80.180	Bos_taurus
ENSPMEG00000010413	dkc1	81	64.619	WBGene00010478	K01G5.5	97	61.021	Caenorhabditis_elegans
ENSPMEG00000010413	dkc1	85	81.136	ENSCJAG00000004210	DKC1	85	81.136	Callithrix_jacchus
ENSPMEG00000010413	dkc1	89	79.596	ENSCAFG00000019620	-	81	82.423	Canis_familiaris
ENSPMEG00000010413	dkc1	88	72.398	ENSCAFG00000009311	-	81	74.820	Canis_familiaris
ENSPMEG00000010413	dkc1	89	79.596	ENSCAFG00020008918	-	81	82.423	Canis_lupus_dingo
ENSPMEG00000010413	dkc1	85	71.560	ENSCAFG00020009379	-	83	71.560	Canis_lupus_dingo
ENSPMEG00000010413	dkc1	85	81.050	ENSCHIG00000017392	DKC1	88	80.180	Capra_hircus
ENSPMEG00000010413	dkc1	86	79.157	ENSTSYG00000007681	DKC1	86	79.157	Carlito_syrichta
ENSPMEG00000010413	dkc1	79	82.064	ENSCAPG00000003342	DKC1	91	82.836	Cavia_aperea
ENSPMEG00000010413	dkc1	85	81.922	ENSCPOG00000008825	DKC1	85	81.922	Cavia_porcellus
ENSPMEG00000010413	dkc1	93	68.908	ENSCCAG00000027418	DKC1	84	71.429	Cebus_capucinus
ENSPMEG00000010413	dkc1	86	80.499	ENSCATG00000033602	DKC1	86	80.499	Cercocebus_atys
ENSPMEG00000010413	dkc1	85	80.866	ENSCLAG00000000720	DKC1	88	80.000	Chinchilla_lanigera
ENSPMEG00000010413	dkc1	86	80.726	ENSCSAG00000006706	DKC1	86	80.726	Chlorocebus_sabaeus
ENSPMEG00000010413	dkc1	85	81.797	ENSCPBG00000005858	DKC1	86	85.222	Chrysemys_picta_bellii
ENSPMEG00000010413	dkc1	94	71.546	ENSCING00000004599	-	92	71.311	Ciona_intestinalis
ENSPMEG00000010413	dkc1	78	80.307	ENSCSAVG00000010047	-	88	79.241	Ciona_savignyi
ENSPMEG00000010413	dkc1	86	80.726	ENSCANG00000027987	DKC1	86	80.726	Colobus_angolensis_palliatus
ENSPMEG00000010413	dkc1	86	80.952	ENSCGRG00001014574	-	86	80.952	Cricetulus_griseus_chok1gshd
ENSPMEG00000010413	dkc1	91	58.720	ENSCGRG00001016789	-	89	59.165	Cricetulus_griseus_chok1gshd
ENSPMEG00000010413	dkc1	98	55.918	ENSCGRG00000014809	-	87	59.028	Cricetulus_griseus_crigri
ENSPMEG00000010413	dkc1	86	80.952	ENSCGRG00000016075	-	86	80.952	Cricetulus_griseus_crigri
ENSPMEG00000010413	dkc1	94	85.744	ENSCSEG00000012633	dkc1	90	87.991	Cynoglossus_semilaevis
ENSPMEG00000010413	dkc1	97	92.990	ENSCVAG00000010155	dkc1	94	92.116	Cyprinodon_variegatus
ENSPMEG00000010413	dkc1	86	89.815	ENSDARG00000016484	dkc1	87	88.662	Danio_rerio
ENSPMEG00000010413	dkc1	86	80.726	ENSDNOG00000004218	DKC1	86	80.726	Dasypus_novemcinctus
ENSPMEG00000010413	dkc1	59	69.333	ENSDORG00000013566	-	91	71.480	Dipodomys_ordii
ENSPMEG00000010413	dkc1	86	68.037	FBgn0259937	Nop60B	88	68.000	Drosophila_melanogaster
ENSPMEG00000010413	dkc1	85	78.458	ENSETEG00000016095	DKC1	90	78.458	Echinops_telfairi
ENSPMEG00000010413	dkc1	66	76.900	ENSEBUG00000015962	dkc1	98	81.100	Eptatretus_burgeri
ENSPMEG00000010413	dkc1	85	78.571	ENSEASG00005007484	DKC1	86	78.571	Equus_asinus_asinus
ENSPMEG00000010413	dkc1	85	78.571	ENSECAG00000023524	DKC1	86	78.571	Equus_caballus
ENSPMEG00000010413	dkc1	78	86.445	ENSEEUG00000003323	DKC1	99	81.840	Erinaceus_europaeus
ENSPMEG00000010413	dkc1	90	87.965	ENSELUG00000014538	dkc1	90	87.965	Esox_lucius
ENSPMEG00000010413	dkc1	84	80.920	ENSFCAG00000006577	DKC1	86	80.920	Felis_catus
ENSPMEG00000010413	dkc1	85	81.963	ENSFALG00000011496	DKC1	86	80.889	Ficedula_albicollis
ENSPMEG00000010413	dkc1	85	81.585	ENSFDAG00000002516	DKC1	86	81.585	Fukomys_damarensis
ENSPMEG00000010413	dkc1	89	94.631	ENSFHEG00000004627	dkc1	90	94.444	Fundulus_heteroclitus
ENSPMEG00000010413	dkc1	78	89.514	ENSGMOG00000017277	dkc1	100	89.514	Gadus_morhua
ENSPMEG00000010413	dkc1	84	83.256	ENSGALG00000005054	DKC1	86	81.390	Gallus_gallus
ENSPMEG00000010413	dkc1	100	97.800	ENSGAFG00000011486	dkc1	86	97.800	Gambusia_affinis
ENSPMEG00000010413	dkc1	80	93.467	ENSGACG00000004373	dkc1	96	94.225	Gasterosteus_aculeatus
ENSPMEG00000010413	dkc1	85	82.488	ENSGAGG00000011330	DKC1	84	82.719	Gopherus_agassizii
ENSPMEG00000010413	dkc1	86	80.952	ENSGGOG00000001045	DKC1	86	80.952	Gorilla_gorilla
ENSPMEG00000010413	dkc1	95	90.188	ENSHBUG00000012436	dkc1	90	90.487	Haplochromis_burtoni
ENSPMEG00000010413	dkc1	80	85.500	ENSHGLG00000000649	DKC1	85	80.135	Heterocephalus_glaber_female
ENSPMEG00000010413	dkc1	80	85.500	ENSHGLG00100001153	DKC1	86	80.135	Heterocephalus_glaber_male
ENSPMEG00000010413	dkc1	96	86.307	ENSHCOG00000021099	dkc1	88	88.616	Hippocampus_comes
ENSPMEG00000010413	dkc1	89	85.590	ENSIPUG00000010309	dkc1	85	85.973	Ictalurus_punctatus
ENSPMEG00000010413	dkc1	86	69.300	ENSSTOG00000011904	-	82	69.300	Ictidomys_tridecemlineatus
ENSPMEG00000010413	dkc1	86	80.090	ENSSTOG00000001074	-	91	80.090	Ictidomys_tridecemlineatus
ENSPMEG00000010413	dkc1	86	74.014	ENSSTOG00000020149	-	85	74.014	Ictidomys_tridecemlineatus
ENSPMEG00000010413	dkc1	56	71.942	ENSJJAG00000010086	-	92	71.942	Jaculus_jaculus
ENSPMEG00000010413	dkc1	90	89.955	ENSKMAG00000008010	dkc1	90	89.579	Kryptolebias_marmoratus
ENSPMEG00000010413	dkc1	91	90.110	ENSLBEG00000019122	dkc1	93	88.742	Labrus_bergylta
ENSPMEG00000010413	dkc1	86	81.336	ENSLACG00000014025	DKC1	90	86.364	Latimeria_chalumnae
ENSPMEG00000010413	dkc1	90	86.813	ENSLOCG00000013713	dkc1	88	89.387	Lepisosteus_oculatus
ENSPMEG00000010413	dkc1	85	80.952	ENSLAFG00000000221	DKC1	87	80.089	Loxodonta_africana
ENSPMEG00000010413	dkc1	86	80.499	ENSMFAG00000032398	DKC1	74	80.499	Macaca_fascicularis
ENSPMEG00000010413	dkc1	86	80.726	ENSMMUG00000005768	DKC1	86	80.726	Macaca_mulatta
ENSPMEG00000010413	dkc1	86	80.726	ENSMNEG00000034503	DKC1	86	80.726	Macaca_nemestrina
ENSPMEG00000010413	dkc1	86	80.726	ENSMLEG00000034422	DKC1	86	80.726	Mandrillus_leucophaeus
ENSPMEG00000010413	dkc1	82	93.932	ENSMAMG00000005427	dkc1	91	94.568	Mastacembelus_armatus
ENSPMEG00000010413	dkc1	95	90.397	ENSMZEG00005014503	dkc1	90	90.708	Maylandia_zebra
ENSPMEG00000010413	dkc1	76	85.897	ENSMGAG00000009238	DKC1	89	83.212	Meleagris_gallopavo
ENSPMEG00000010413	dkc1	55	71.480	ENSMAUG00000016454	-	91	71.480	Mesocricetus_auratus
ENSPMEG00000010413	dkc1	79	73.350	ENSMICG00000002818	-	99	76.099	Microcebus_murinus
ENSPMEG00000010413	dkc1	89	79.007	ENSMICG00000038751	-	80	84.750	Microcebus_murinus
ENSPMEG00000010413	dkc1	55	69.314	ENSMOCG00000001169	-	91	69.314	Microtus_ochrogaster
ENSPMEG00000010413	dkc1	84	90.758	ENSMMOG00000020348	dkc1	88	91.646	Mola_mola
ENSPMEG00000010413	dkc1	80	85.714	ENSMODG00000009243	DKC1	69	86.146	Monodelphis_domestica
ENSPMEG00000010413	dkc1	88	91.364	ENSMALG00000009454	dkc1	85	91.244	Monopterus_albus
ENSPMEG00000010413	dkc1	86	69.488	MGP_CAROLIEiJ_G0033191	Dkc1	86	81.102	Mus_caroli
ENSPMEG00000010413	dkc1	85	80.638	ENSMUSG00000031403	Dkc1	86	80.638	Mus_musculus
ENSPMEG00000010413	dkc1	84	81.193	MGP_PahariEiJ_G0031735	Dkc1	85	81.193	Mus_pahari
ENSPMEG00000010413	dkc1	85	80.638	MGP_SPRETEiJ_G0034351	Dkc1	86	80.638	Mus_spretus
ENSPMEG00000010413	dkc1	92	77.826	ENSMPUG00000016136	DKC1	78	82.227	Mustela_putorius_furo
ENSPMEG00000010413	dkc1	89	75.803	ENSMLUG00000011918	DKC1	89	75.803	Myotis_lucifugus
ENSPMEG00000010413	dkc1	55	71.841	ENSNGAG00000015724	-	92	71.841	Nannospalax_galili
ENSPMEG00000010413	dkc1	79	95.960	ENSNBRG00000005638	dkc1	80	95.960	Neolamprologus_brichardi
ENSPMEG00000010413	dkc1	86	80.726	ENSNLEG00000014323	DKC1	86	80.726	Nomascus_leucogenys
ENSPMEG00000010413	dkc1	81	81.931	ENSMEUG00000001066	DKC1	87	82.456	Notamacropus_eugenii
ENSPMEG00000010413	dkc1	70	79.310	ENSOPRG00000005248	DKC1	69	79.310	Ochotona_princeps
ENSPMEG00000010413	dkc1	55	71.480	ENSODEG00000000549	-	91	71.480	Octodon_degus
ENSPMEG00000010413	dkc1	80	87.250	ENSODEG00000011816	-	86	82.167	Octodon_degus
ENSPMEG00000010413	dkc1	93	90.578	ENSONIG00000013889	dkc1	86	92.379	Oreochromis_niloticus
ENSPMEG00000010413	dkc1	56	63.576	ENSOANG00000022295	-	86	62.783	Ornithorhynchus_anatinus
ENSPMEG00000010413	dkc1	84	83.683	ENSOANG00000008713	-	90	82.798	Ornithorhynchus_anatinus
ENSPMEG00000010413	dkc1	85	80.000	ENSOCUG00000012646	DKC1	86	80.000	Oryctolagus_cuniculus
ENSPMEG00000010413	dkc1	91	86.652	ENSORLG00000018748	dkc1	85	87.760	Oryzias_latipes
ENSPMEG00000010413	dkc1	89	88.090	ENSOMEG00000005786	dkc1	82	90.377	Oryzias_melastigma
ENSPMEG00000010413	dkc1	86	78.714	ENSOGAG00000003399	DKC1	86	78.714	Otolemur_garnettii
ENSPMEG00000010413	dkc1	85	81.279	ENSOARG00000003047	DKC1	88	80.405	Ovis_aries
ENSPMEG00000010413	dkc1	83	82.160	ENSPPAG00000023820	DKC1	86	81.179	Pan_paniscus
ENSPMEG00000010413	dkc1	84	80.920	ENSPPRG00000009104	DKC1	86	80.920	Panthera_pardus
ENSPMEG00000010413	dkc1	84	82.979	ENSPTIG00000017469	DKC1	85	82.979	Panthera_tigris_altaica
ENSPMEG00000010413	dkc1	86	80.952	ENSPTRG00000043416	-	74	80.952	Pan_troglodytes
ENSPMEG00000010413	dkc1	86	80.952	ENSPTRG00000022449	DKC1	86	80.952	Pan_troglodytes
ENSPMEG00000010413	dkc1	86	80.726	ENSPANG00000011978	DKC1	86	80.726	Papio_anubis
ENSPMEG00000010413	dkc1	86	86.636	ENSPKIG00000008443	dkc1	92	86.239	Paramormyrops_kingsleyae
ENSPMEG00000010413	dkc1	72	88.827	ENSPSIG00000013765	DKC1	86	88.827	Pelodiscus_sinensis
ENSPMEG00000010413	dkc1	93	77.189	ENSPMGG00000004097	dkc1	90	76.986	Periophthalmus_magnuspinnatus
ENSPMEG00000010413	dkc1	65	85.135	ENSPEMG00000013348	Dkc1	83	84.916	Peromyscus_maniculatus_bairdii
ENSPMEG00000010413	dkc1	80	86.466	ENSPCIG00000016706	DKC1	67	86.466	Phascolarctos_cinereus
ENSPMEG00000010413	dkc1	100	99.400	ENSPFOG00000018653	dkc1	100	99.400	Poecilia_formosa
ENSPMEG00000010413	dkc1	100	99.400	ENSPLAG00000003272	dkc1	90	99.400	Poecilia_latipinna
ENSPMEG00000010413	dkc1	100	98.600	ENSPREG00000004100	dkc1	94	95.833	Poecilia_reticulata
ENSPMEG00000010413	dkc1	86	80.952	ENSPPYG00000020892	DKC1	86	80.952	Pongo_abelii
ENSPMEG00000010413	dkc1	75	85.561	ENSPCAG00000015034	DKC1	73	85.561	Procavia_capensis
ENSPMEG00000010413	dkc1	86	80.045	ENSPCOG00000026874	DKC1	86	80.045	Propithecus_coquereli
ENSPMEG00000010413	dkc1	86	81.439	ENSPVAG00000009222	DKC1	86	81.439	Pteropus_vampyrus
ENSPMEG00000010413	dkc1	92	87.712	ENSPNYG00000020063	dkc1	88	88.764	Pundamilia_nyererei
ENSPMEG00000010413	dkc1	87	85.747	ENSPNAG00000005780	dkc1	86	86.143	Pygocentrus_nattereri
ENSPMEG00000010413	dkc1	89	76.344	ENSRNOG00000055562	Dkc1	86	78.458	Rattus_norvegicus
ENSPMEG00000010413	dkc1	86	80.726	ENSRBIG00000028457	DKC1	74	80.726	Rhinopithecus_bieti
ENSPMEG00000010413	dkc1	86	80.726	ENSRROG00000044780	DKC1	86	80.726	Rhinopithecus_roxellana
ENSPMEG00000010413	dkc1	79	70.127	YLR175W	-	91	64.399	Saccharomyces_cerevisiae
ENSPMEG00000010413	dkc1	86	80.952	ENSSBOG00000033746	DKC1	85	80.952	Saimiri_boliviensis_boliviensis
ENSPMEG00000010413	dkc1	90	78.982	ENSSHAG00000002463	DKC1	92	80.690	Sarcophilus_harrisii
ENSPMEG00000010413	dkc1	89	85.088	ENSSFOG00015009585	dkc1	85	86.667	Scleropages_formosus
ENSPMEG00000010413	dkc1	90	87.665	ENSSMAG00000002552	dkc1	89	87.665	Scophthalmus_maximus
ENSPMEG00000010413	dkc1	93	89.247	ENSSDUG00000009963	dkc1	90	90.287	Seriola_dumerili
ENSPMEG00000010413	dkc1	93	87.716	ENSSLDG00000019342	dkc1	87	90.300	Seriola_lalandi_dorsalis
ENSPMEG00000010413	dkc1	85	77.045	ENSSARG00000001822	DKC1	87	77.626	Sorex_araneus
ENSPMEG00000010413	dkc1	83	83.373	ENSSPUG00000018907	DKC1	87	78.947	Sphenodon_punctatus
ENSPMEG00000010413	dkc1	93	87.898	ENSSPAG00000002585	dkc1	82	90.531	Stegastes_partitus
ENSPMEG00000010413	dkc1	79	85.894	ENSSSCG00000012823	DKC1	85	84.146	Sus_scrofa
ENSPMEG00000010413	dkc1	78	85.930	ENSTGUG00000006781	DKC1	90	85.185	Taeniopygia_guttata
ENSPMEG00000010413	dkc1	95	84.615	ENSTRUG00000004413	dkc1	90	88.444	Takifugu_rubripes
ENSPMEG00000010413	dkc1	90	70.410	ENSTNIG00000002582	dkc1	91	70.323	Tetraodon_nigroviridis
ENSPMEG00000010413	dkc1	57	80.936	ENSTBEG00000011262	DKC1	85	80.259	Tupaia_belangeri
ENSPMEG00000010413	dkc1	55	85.921	ENSTTRG00000008089	DKC1	55	85.921	Tursiops_truncatus
ENSPMEG00000010413	dkc1	94	76.645	ENSUAMG00000022721	DKC1	89	81.991	Ursus_americanus
ENSPMEG00000010413	dkc1	94	76.221	ENSUMAG00000016899	DKC1	98	83.709	Ursus_maritimus
ENSPMEG00000010413	dkc1	80	70.750	ENSVVUG00000021671	-	76	69.830	Vulpes_vulpes
ENSPMEG00000010413	dkc1	89	78.194	ENSVVUG00000020734	-	72	82.339	Vulpes_vulpes
ENSPMEG00000010413	dkc1	92	83.117	ENSXETG00000032517	DKC1	85	87.324	Xenopus_tropicalis
ENSPMEG00000010413	dkc1	93	94.231	ENSXCOG00000005498	dkc1	93	95.172	Xiphophorus_couchianus
ENSPMEG00000010413	dkc1	100	97.000	ENSXMAG00000004919	dkc1	100	97.000	Xiphophorus_maculatus