EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000010417 (Gene tree)
Gene ID: 106921604
Gene Symbol: rab12
Alias: -
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 10784 bases
Position: chrKQ551481.1:75178-85961
Accession: 106921604
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000026631	MMR_HSR1	PF01926.23	5.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000002073	-	4375	XM_014993387	ENSPMEP00000026631	244 (aa)	XP_014848873	UPI000443F2AF

Gene Model

Click here to download ENSPMEG00000010417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000010417's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000010417	rab12	61	33.775	ENSPMEG00000000572	rras	82	33.537
ENSPMEG00000010417	rab12	67	35.119	ENSPMEG00000023735	rab9a	83	35.119
ENSPMEG00000010417	rab12	76	37.368	ENSPMEG00000004392	RAB7A	81	36.686
ENSPMEG00000010417	rab12	70	51.163	ENSPMEG00000022988	-	84	52.381
ENSPMEG00000010417	rab12	64	31.210	ENSPMEG00000012042	si:ch73-116o1.2	80	31.548
ENSPMEG00000010417	rab12	69	38.095	ENSPMEG00000007238	rab5aa	77	38.095
ENSPMEG00000010417	rab12	70	49.412	ENSPMEG00000002054	rab1ba	84	49.704
ENSPMEG00000010417	rab12	65	41.104	ENSPMEG00000003177	rab33a	58	40.854
ENSPMEG00000010417	rab12	61	31.788	ENSPMEG00000019525	KRAS	85	32.099
ENSPMEG00000010417	rab12	74	39.378	ENSPMEG00000022709	rab33ba	83	38.725
ENSPMEG00000010417	rab12	77	37.696	ENSPMEG00000014170	rab41	73	41.026
ENSPMEG00000010417	rab12	83	38.967	ENSPMEG00000007932	rab11a	95	38.967
ENSPMEG00000010417	rab12	71	40.462	ENSPMEG00000007165	si:dkey-16l2.16	82	40.462
ENSPMEG00000010417	rab12	65	32.704	ENSPMEG00000020579	rhebl1	85	32.704
ENSPMEG00000010417	rab12	80	39.394	ENSPMEG00000017161	-	72	40.909
ENSPMEG00000010417	rab12	83	39.614	ENSPMEG00000001400	rab25b	80	42.604
ENSPMEG00000010417	rab12	76	37.368	ENSPMEG00000021641	-	81	36.686
ENSPMEG00000010417	rab12	67	37.870	ENSPMEG00000021807	RAB29	82	37.870
ENSPMEG00000010417	rab12	68	32.335	ENSPMEG00000014302	rheb	89	32.335
ENSPMEG00000010417	rab12	67	34.524	ENSPMEG00000013734	rab9b	75	34.524
ENSPMEG00000010417	rab12	85	35.849	ENSPMEG00000010857	rab14	80	39.884
ENSPMEG00000010417	rab12	83	38.426	ENSPMEG00000012389	rab11bb	79	43.210
ENSPMEG00000010417	rab12	83	37.379	ENSPMEG00000005491	rab25a	95	37.864
ENSPMEG00000010417	rab12	64	41.667	ENSPMEG00000019167	rab6ba	84	38.286
ENSPMEG00000010417	rab12	82	32.353	ENSPMEG00000010190	RAB9A	77	35.714
ENSPMEG00000010417	rab12	80	39.394	ENSPMEG00000002564	-	72	40.909
ENSPMEG00000010417	rab12	64	40.373	ENSPMEG00000012932	si:dkey-34d22.5	72	40.373
ENSPMEG00000010417	rab12	66	34.756	ENSPMEG00000002086	rab34a	62	34.756
ENSPMEG00000010417	rab12	77	32.474	ENSPMEG00000017300	rab23	78	34.731
ENSPMEG00000010417	rab12	84	45.098	ENSPMEG00000005288	-	83	51.479
ENSPMEG00000010417	rab12	78	38.220	ENSPMEG00000021872	rab6bb	84	38.857
ENSPMEG00000010417	rab12	65	35.849	ENSPMEG00000003743	rab22a	81	35.849
ENSPMEG00000010417	rab12	64	36.250	ENSPMEG00000013297	rab34b	63	36.250
ENSPMEG00000010417	rab12	82	39.801	ENSPMEG00000007917	rab11ba	60	41.111
ENSPMEG00000010417	rab12	70	45.930	ENSPMEG00000009701	rab30	84	45.930
ENSPMEG00000010417	rab12	81	41.624	ENSPMEG00000021986	rab15	80	45.029
ENSPMEG00000010417	rab12	81	37.056	ENSPMEG00000006424	-	85	41.007
ENSPMEG00000010417	rab12	69	40.828	ENSPMEG00000012205	rab4a	79	40.828
ENSPMEG00000010417	rab12	69	37.500	ENSPMEG00000011336	rab5c	76	37.500
ENSPMEG00000010417	rab12	73	46.111	ENSPMEG00000022350	zgc:171927	83	46.512
ENSPMEG00000010417	rab12	83	38.679	ENSPMEG00000007842	-	80	41.667
ENSPMEG00000010417	rab12	70	51.163	ENSPMEG00000008020	-	84	52.381
ENSPMEG00000010417	rab12	63	38.788	ENSPMEG00000019646	-	68	38.788
ENSPMEG00000010417	rab12	73	39.891	ENSPMEG00000010152	zgc:101559	77	39.891
ENSPMEG00000010417	rab12	70	40.698	ENSPMEG00000019497	rab42a	78	40.698
ENSPMEG00000010417	rab12	67	46.951	ENSPMEG00000008223	rab18b	84	45.143
ENSPMEG00000010417	rab12	66	32.919	ENSPMEG00000004703	rabl2	71	32.919
ENSPMEG00000010417	rab12	66	46.914	ENSPMEG00000021947	rab35b	94	42.932
ENSPMEG00000010417	rab12	57	37.143	ENSPMEG00000015292	rab36	96	34.104
ENSPMEG00000010417	rab12	82	36.318	ENSPMEG00000003369	rab6a	75	42.308
ENSPMEG00000010417	rab12	73	41.899	ENSPMEG00000000408	RAB15	85	41.899
ENSPMEG00000010417	rab12	69	51.479	ENSPMEG00000003046	rab1ab	83	51.479
ENSPMEG00000010417	rab12	83	38.095	ENSPMEG00000000804	rab11al	76	42.424
ENSPMEG00000010417	rab12	69	39.286	ENSPMEG00000012614	-	75	38.095
ENSPMEG00000010417	rab12	59	32.192	ENSPMEG00000018380	rras2	70	33.898
ENSPMEG00000010417	rab12	68	41.667	ENSPMEG00000007976	-	78	41.667
ENSPMEG00000010417	rab12	67	34.524	ENSPMEG00000024399	rab9b	75	34.524
ENSPMEG00000010417	rab12	68	41.916	ENSPMEG00000004946	RAB39B	78	41.916
ENSPMEG00000010417	rab12	66	34.146	ENSPMEG00000019159	si:dkey-13a21.4	79	34.146
ENSPMEG00000010417	rab12	67	47.561	ENSPMEG00000013085	rab18a	79	47.561

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000010417	rab12	93	81.579	ENSG00000206418	RAB12	100	82.186	Homo_sapiens
ENSPMEG00000010417	rab12	89	76.256	ENSAMEG00000007452	RAB12	94	79.909	Ailuropoda_melanoleuca
ENSPMEG00000010417	rab12	100	95.902	ENSACIG00000020616	rab12	100	95.902	Amphilophus_citrinellus
ENSPMEG00000010417	rab12	100	94.262	ENSAOCG00000002130	rab12	100	94.262	Amphiprion_ocellaris
ENSPMEG00000010417	rab12	100	94.262	ENSAPEG00000013255	rab12	100	94.262	Amphiprion_percula
ENSPMEG00000010417	rab12	100	93.852	ENSATEG00000019683	rab12	100	93.852	Anabas_testudineus
ENSPMEG00000010417	rab12	82	87.500	ENSACAG00000003360	RAB12	88	85.398	Anolis_carolinensis
ENSPMEG00000010417	rab12	100	96.311	ENSACLG00000007696	rab12	100	96.311	Astatotilapia_calliptera
ENSPMEG00000010417	rab12	100	87.398	ENSAMXG00000004882	rab12	100	87.805	Astyanax_mexicanus
ENSPMEG00000010417	rab12	93	82.018	ENSBTAG00000010356	RAB12	100	82.591	Bos_taurus
ENSPMEG00000010417	rab12	93	82.018	ENSCJAG00000015468	RAB12	72	82.186	Callithrix_jacchus
ENSPMEG00000010417	rab12	93	81.579	ENSCAFG00020023721	RAB12	84	82.186	Canis_lupus_dingo
ENSPMEG00000010417	rab12	93	82.018	ENSCHIG00000016103	RAB12	100	82.591	Capra_hircus
ENSPMEG00000010417	rab12	85	85.238	ENSCPOG00000022689	RAB12	100	87.619	Cavia_porcellus
ENSPMEG00000010417	rab12	93	82.018	ENSCCAG00000022862	RAB12	100	81.781	Cebus_capucinus
ENSPMEG00000010417	rab12	91	82.589	ENSCATG00000037784	RAB12	93	85.778	Cercocebus_atys
ENSPMEG00000010417	rab12	84	86.829	ENSCSAG00000017569	RAB12	72	81.855	Chlorocebus_sabaeus
ENSPMEG00000010417	rab12	93	81.304	ENSCPBG00000028375	RAB12	92	85.841	Chrysemys_picta_bellii
ENSPMEG00000010417	rab12	89	82.648	ENSCANG00000031453	RAB12	99	86.301	Colobus_angolensis_palliatus
ENSPMEG00000010417	rab12	93	82.895	ENSCGRG00001006958	Rab12	83	81.781	Cricetulus_griseus_chok1gshd
ENSPMEG00000010417	rab12	100	94.672	ENSCSEG00000016933	rab12	100	94.672	Cynoglossus_semilaevis
ENSPMEG00000010417	rab12	100	96.341	ENSCVAG00000003539	rab12	100	96.341	Cyprinodon_variegatus
ENSPMEG00000010417	rab12	100	86.066	ENSDARG00000089428	rab12	95	91.031	Danio_rerio
ENSPMEG00000010417	rab12	84	86.341	ENSDNOG00000046064	RAB12	52	85.333	Dasypus_novemcinctus
ENSPMEG00000010417	rab12	91	82.589	ENSDORG00000008920	Rab12	99	85.398	Dipodomys_ordii
ENSPMEG00000010417	rab12	77	65.608	ENSEBUG00000006581	rab12	92	64.583	Eptatretus_burgeri
ENSPMEG00000010417	rab12	93	81.579	ENSEASG00005002926	RAB12	83	81.377	Equus_asinus_asinus
ENSPMEG00000010417	rab12	93	81.579	ENSECAG00000007384	RAB12	71	81.377	Equus_caballus
ENSPMEG00000010417	rab12	100	88.525	ENSELUG00000007123	rab12	100	88.115	Esox_lucius
ENSPMEG00000010417	rab12	93	81.579	ENSFCAG00000027710	RAB12	72	82.186	Felis_catus
ENSPMEG00000010417	rab12	100	95.918	ENSFHEG00000004319	rab12	100	95.918	Fundulus_heteroclitus
ENSPMEG00000010417	rab12	86	90.952	ENSGMOG00000012335	rab12	87	90.476	Gadus_morhua
ENSPMEG00000010417	rab12	91	82.589	ENSGALG00000033608	RAB12	90	85.398	Gallus_gallus
ENSPMEG00000010417	rab12	90	91.324	ENSGACG00000016639	rab12	100	91.324	Gasterosteus_aculeatus
ENSPMEG00000010417	rab12	93	81.304	ENSGAGG00000007278	RAB12	92	85.841	Gopherus_agassizii
ENSPMEG00000010417	rab12	100	96.311	ENSHBUG00000008497	rab12	100	96.311	Haplochromis_burtoni
ENSPMEG00000010417	rab12	96	80.169	ENSHGLG00000006189	RAB12	86	86.425	Heterocephalus_glaber_female
ENSPMEG00000010417	rab12	100	89.388	ENSHCOG00000012376	rab12	100	88.115	Hippocampus_comes
ENSPMEG00000010417	rab12	100	87.295	ENSIPUG00000017401	rab12	100	87.295	Ictalurus_punctatus
ENSPMEG00000010417	rab12	89	82.192	ENSSTOG00000025122	RAB12	96	85.845	Ictidomys_tridecemlineatus
ENSPMEG00000010417	rab12	91	82.589	ENSJJAG00000019064	Rab12	99	85.778	Jaculus_jaculus
ENSPMEG00000010417	rab12	100	90.574	ENSKMAG00000020056	rab12	100	90.164	Kryptolebias_marmoratus
ENSPMEG00000010417	rab12	100	95.082	ENSLBEG00000013756	rab12	100	95.082	Labrus_bergylta
ENSPMEG00000010417	rab12	90	86.547	ENSLACG00000010461	RAB12	91	85.841	Latimeria_chalumnae
ENSPMEG00000010417	rab12	100	83.468	ENSLOCG00000002680	rab12	100	85.484	Lepisosteus_oculatus
ENSPMEG00000010417	rab12	93	81.057	ENSMFAG00000043551	RAB12	100	80.894	Macaca_fascicularis
ENSPMEG00000010417	rab12	84	86.829	ENSMNEG00000040853	RAB12	89	85.778	Macaca_nemestrina
ENSPMEG00000010417	rab12	100	93.852	ENSMAMG00000006862	rab12	100	93.852	Mastacembelus_armatus
ENSPMEG00000010417	rab12	100	96.311	ENSMZEG00005024316	rab12	100	96.311	Maylandia_zebra
ENSPMEG00000010417	rab12	83	82.843	ENSMGAG00000009197	RAB12	100	86.765	Meleagris_gallopavo
ENSPMEG00000010417	rab12	93	82.895	ENSMAUG00000008371	Rab12	83	81.781	Mesocricetus_auratus
ENSPMEG00000010417	rab12	91	82.143	ENSMICG00000030661	RAB12	94	85.333	Microcebus_murinus
ENSPMEG00000010417	rab12	89	83.105	ENSMOCG00000000452	Rab12	100	86.758	Microtus_ochrogaster
ENSPMEG00000010417	rab12	84	87.317	ENSMODG00000021452	RAB12	67	86.222	Monodelphis_domestica
ENSPMEG00000010417	rab12	100	91.393	ENSMALG00000015762	rab12	100	91.393	Monopterus_albus
ENSPMEG00000010417	rab12	93	83.333	MGP_CAROLIEiJ_G0021839	Rab12	84	81.781	Mus_caroli
ENSPMEG00000010417	rab12	93	83.333	ENSMUSG00000023460	Rab12	100	81.781	Mus_musculus
ENSPMEG00000010417	rab12	93	83.333	MGP_PahariEiJ_G0020826	Rab12	100	81.781	Mus_pahari
ENSPMEG00000010417	rab12	93	83.333	MGP_SPRETEiJ_G0022750	Rab12	83	81.781	Mus_spretus
ENSPMEG00000010417	rab12	100	78.138	ENSMLUG00000002883	RAB12	100	81.377	Myotis_lucifugus
ENSPMEG00000010417	rab12	94	79.828	ENSNGAG00000024103	-	96	85.333	Nannospalax_galili
ENSPMEG00000010417	rab12	91	75.446	ENSNGAG00000019722	-	92	75.111	Nannospalax_galili
ENSPMEG00000010417	rab12	100	96.311	ENSNBRG00000014428	rab12	100	96.311	Neolamprologus_brichardi
ENSPMEG00000010417	rab12	93	81.579	ENSNLEG00000006939	RAB12	100	81.781	Nomascus_leucogenys
ENSPMEG00000010417	rab12	100	78.629	ENSMEUG00000000493	RAB12	91	86.222	Notamacropus_eugenii
ENSPMEG00000010417	rab12	89	83.562	ENSODEG00000006414	RAB12	100	87.215	Octodon_degus
ENSPMEG00000010417	rab12	100	96.311	ENSONIG00000018469	rab12	100	96.311	Oreochromis_niloticus
ENSPMEG00000010417	rab12	100	93.852	ENSORLG00000003902	rab12	100	93.852	Oryzias_latipes
ENSPMEG00000010417	rab12	100	94.262	ENSORLG00020005131	rab12	100	94.262	Oryzias_latipes_hni
ENSPMEG00000010417	rab12	100	93.852	ENSORLG00015007869	rab12	100	93.852	Oryzias_latipes_hsok
ENSPMEG00000010417	rab12	100	95.902	ENSOMEG00000008191	rab12	100	95.902	Oryzias_melastigma
ENSPMEG00000010417	rab12	85	82.857	ENSOGAG00000028002	RAB12	99	86.667	Otolemur_garnettii
ENSPMEG00000010417	rab12	78	87.435	ENSOARG00000000728	RAB12	88	85.581	Ovis_aries
ENSPMEG00000010417	rab12	84	82.609	ENSPPAG00000009152	RAB12	97	86.893	Pan_paniscus
ENSPMEG00000010417	rab12	93	81.579	ENSPPRG00000024521	RAB12	100	82.186	Panthera_pardus
ENSPMEG00000010417	rab12	93	81.579	ENSPTRG00000009853	RAB12	100	82.186	Pan_troglodytes
ENSPMEG00000010417	rab12	93	82.895	ENSPANG00000009320	RAB12	100	82.591	Papio_anubis
ENSPMEG00000010417	rab12	100	86.531	ENSPKIG00000008579	rab12	100	86.939	Paramormyrops_kingsleyae
ENSPMEG00000010417	rab12	100	90.164	ENSPMGG00000001890	rab12	100	90.574	Periophthalmus_magnuspinnatus
ENSPMEG00000010417	rab12	93	82.456	ENSPEMG00000021032	Rab12	84	81.377	Peromyscus_maniculatus_bairdii
ENSPMEG00000010417	rab12	88	84.793	ENSPCIG00000010453	RAB12	56	86.222	Phascolarctos_cinereus
ENSPMEG00000010417	rab12	100	100.000	ENSPFOG00000001579	rab12	100	100.000	Poecilia_formosa
ENSPMEG00000010417	rab12	100	100.000	ENSPLAG00000013594	rab12	100	100.000	Poecilia_latipinna
ENSPMEG00000010417	rab12	100	99.590	ENSPREG00000017487	rab12	100	99.590	Poecilia_reticulata
ENSPMEG00000010417	rab12	93	81.579	ENSPPYG00000009015	-	72	82.186	Pongo_abelii
ENSPMEG00000010417	rab12	93	81.579	ENSPCAG00000015007	RAB12	100	81.781	Procavia_capensis
ENSPMEG00000010417	rab12	93	81.579	ENSPCOG00000019816	RAB12	100	82.186	Propithecus_coquereli
ENSPMEG00000010417	rab12	93	82.018	ENSPVAG00000002757	RAB12	100	82.591	Pteropus_vampyrus
ENSPMEG00000010417	rab12	100	96.311	ENSPNYG00000005654	rab12	100	96.311	Pundamilia_nyererei
ENSPMEG00000010417	rab12	100	96.311	ENSPNYG00000023905	rab12	100	96.311	Pundamilia_nyererei
ENSPMEG00000010417	rab12	100	86.585	ENSPNAG00000015031	rab12	100	86.992	Pygocentrus_nattereri
ENSPMEG00000010417	rab12	93	80.786	ENSRNOG00000019295	Rab12	91	79.913	Rattus_norvegicus
ENSPMEG00000010417	rab12	91	82.589	ENSRBIG00000028760	RAB12	97	85.778	Rhinopithecus_bieti
ENSPMEG00000010417	rab12	91	82.589	ENSRROG00000019249	RAB12	94	85.778	Rhinopithecus_roxellana
ENSPMEG00000010417	rab12	94	77.489	ENSSBOG00000021125	RAB12	80	86.603	Saimiri_boliviensis_boliviensis
ENSPMEG00000010417	rab12	93	81.579	ENSSHAG00000001489	RAB12	91	86.341	Sarcophilus_harrisii
ENSPMEG00000010417	rab12	100	92.623	ENSSMAG00000012678	rab12	100	92.623	Scophthalmus_maximus
ENSPMEG00000010417	rab12	100	94.672	ENSSDUG00000008505	rab12	100	94.672	Seriola_dumerili
ENSPMEG00000010417	rab12	100	94.672	ENSSLDG00000022239	rab12	100	94.672	Seriola_lalandi_dorsalis
ENSPMEG00000010417	rab12	83	87.745	ENSSPUG00000003222	RAB12	92	86.283	Sphenodon_punctatus
ENSPMEG00000010417	rab12	100	94.672	ENSSPAG00000010822	rab12	100	94.672	Stegastes_partitus
ENSPMEG00000010417	rab12	100	80.162	ENSSSCG00000038026	RAB12	100	82.591	Sus_scrofa
ENSPMEG00000010417	rab12	93	81.385	ENSTGUG00000009889	RAB12	100	81.200	Taeniopygia_guttata
ENSPMEG00000010417	rab12	100	90.164	ENSTRUG00000024455	rab12	100	89.754	Takifugu_rubripes
ENSPMEG00000010417	rab12	100	91.803	ENSTNIG00000014859	rab12	100	91.393	Tetraodon_nigroviridis
ENSPMEG00000010417	rab12	89	82.648	ENSTTRG00000008711	RAB12	99	86.301	Tursiops_truncatus
ENSPMEG00000010417	rab12	93	81.579	ENSUAMG00000018092	RAB12	100	82.186	Ursus_americanus
ENSPMEG00000010417	rab12	90	81.900	ENSVVUG00000011748	RAB12	99	85.520	Vulpes_vulpes
ENSPMEG00000010417	rab12	95	82.128	ENSXETG00000004289	rab12	79	81.855	Xenopus_tropicalis
ENSPMEG00000010417	rab12	100	97.541	ENSXCOG00000019310	rab12	100	97.541	Xiphophorus_couchianus
ENSPMEG00000010417	rab12	100	97.951	ENSXMAG00000023617	rab12	100	97.951	Xiphophorus_maculatus