EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000011076 (Gene tree)
Gene ID: 106905845
Gene Symbol: shq1
Alias: -
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 84318 bases
Position: chrKQ553202.1:1274-85591
Accession: 106905845
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000009252	SHQ1	PF04925.15	6.1e-65	1	1
ENSPMEP00000026998	SHQ1	PF04925.15	8.3e-65	1	1
ENSPMEP00000009243	SHQ1	PF04925.15	5.5e-48	1	2
ENSPMEP00000009243	SHQ1	PF04925.15	5.5e-48	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000001110	-	2408	-	ENSPMEP00000009252	392 (aa)	-	-
ENSPMET00000001127	-	2292	XM_014970858	ENSPMEP00000026998	451 (aa)	XP_014826344	-
ENSPMET00000001120	-	2354	-	ENSPMEP00000009243	374 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000011076's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000011076's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000011076	shq1	96	50.955	ENSG00000144736	SHQ1	100	50.877	Homo_sapiens
ENSPMEG00000011076	shq1	97	67.160	ENSAPOG00000000397	shq1	76	67.672	Acanthochromis_polyacanthus
ENSPMEG00000011076	shq1	96	47.966	ENSAMEG00000015140	SHQ1	60	57.759	Ailuropoda_melanoleuca
ENSPMEG00000011076	shq1	98	66.995	ENSACIG00000021249	shq1	77	66.167	Amphilophus_citrinellus
ENSPMEG00000011076	shq1	97	67.726	ENSAOCG00000023311	shq1	76	68.094	Amphiprion_ocellaris
ENSPMEG00000011076	shq1	97	68.564	ENSAPEG00000021686	shq1	76	68.615	Amphiprion_percula
ENSPMEG00000011076	shq1	97	66.883	ENSATEG00000008475	shq1	75	66.377	Anabas_testudineus
ENSPMEG00000011076	shq1	77	55.432	ENSAPLG00000013926	SHQ1	68	57.020	Anas_platyrhynchos
ENSPMEG00000011076	shq1	74	59.357	ENSACAG00000014809	SHQ1	52	58.974	Anolis_carolinensis
ENSPMEG00000011076	shq1	96	50.959	ENSANAG00000029241	SHQ1	60	57.471	Aotus_nancymaae
ENSPMEG00000011076	shq1	96	39.130	ENSANAG00000030500	-	58	42.899	Aotus_nancymaae
ENSPMEG00000011076	shq1	98	66.995	ENSACLG00000023077	shq1	78	62.880	Astatotilapia_calliptera
ENSPMEG00000011076	shq1	75	56.805	ENSAMXG00000043822	shq1	59	57.726	Astyanax_mexicanus
ENSPMEG00000011076	shq1	99	49.072	ENSBTAG00000005436	SHQ1	60	57.759	Bos_taurus
ENSPMEG00000011076	shq1	96	50.427	ENSCJAG00000015131	SHQ1	60	57.184	Callithrix_jacchus
ENSPMEG00000011076	shq1	96	48.927	ENSCAFG00000006434	SHQ1	60	57.471	Canis_familiaris
ENSPMEG00000011076	shq1	96	48.927	ENSCAFG00020016743	SHQ1	63	57.471	Canis_lupus_dingo
ENSPMEG00000011076	shq1	67	57.419	ENSCHIG00000012271	SHQ1	54	56.897	Capra_hircus
ENSPMEG00000011076	shq1	71	53.395	ENSTSYG00000014439	SHQ1	64	53.913	Carlito_syrichta
ENSPMEG00000011076	shq1	96	45.695	ENSCAPG00000009343	SHQ1	52	65.000	Cavia_aperea
ENSPMEG00000011076	shq1	79	55.647	ENSCPOG00000011443	SHQ1	59	57.061	Cavia_porcellus
ENSPMEG00000011076	shq1	95	50.743	ENSCCAG00000027080	SHQ1	58	59.223	Cebus_capucinus
ENSPMEG00000011076	shq1	92	44.111	ENSCCAG00000036087	-	60	46.765	Cebus_capucinus
ENSPMEG00000011076	shq1	99	49.480	ENSCATG00000041238	SHQ1	63	58.046	Cercocebus_atys
ENSPMEG00000011076	shq1	77	56.704	ENSCLAG00000004206	SHQ1	60	57.759	Chinchilla_lanigera
ENSPMEG00000011076	shq1	96	50.955	ENSCSAG00000011514	SHQ1	70	58.333	Chlorocebus_sabaeus
ENSPMEG00000011076	shq1	56	58.696	ENSCHOG00000003273	-	66	58.696	Choloepus_hoffmanni
ENSPMEG00000011076	shq1	77	56.825	ENSCPBG00000006441	SHQ1	57	58.120	Chrysemys_picta_bellii
ENSPMEG00000011076	shq1	67	41.503	ENSCING00000008013	-	75	41.040	Ciona_intestinalis
ENSPMEG00000011076	shq1	66	40.199	ENSCSAVG00000002332	-	77	38.776	Ciona_savignyi
ENSPMEG00000011076	shq1	96	50.531	ENSCANG00000039295	SHQ1	60	58.333	Colobus_angolensis_palliatus
ENSPMEG00000011076	shq1	75	58.046	ENSCGRG00001012583	Shq1	61	56.897	Cricetulus_griseus_chok1gshd
ENSPMEG00000011076	shq1	75	58.046	ENSCGRG00000009849	Shq1	61	56.897	Cricetulus_griseus_crigri
ENSPMEG00000011076	shq1	98	60.669	ENSCSEG00000007829	shq1	77	61.426	Cynoglossus_semilaevis
ENSPMEG00000011076	shq1	96	76.682	ENSCVAG00000020049	shq1	78	77.363	Cyprinodon_variegatus
ENSPMEG00000011076	shq1	99	55.088	ENSDARG00000058522	shq1	73	53.319	Danio_rerio
ENSPMEG00000011076	shq1	98	48.910	ENSDNOG00000033937	SHQ1	60	58.621	Dasypus_novemcinctus
ENSPMEG00000011076	shq1	71	48.624	ENSETEG00000005766	SHQ1	60	48.276	Echinops_telfairi
ENSPMEG00000011076	shq1	79	47.091	ENSEBUG00000005445	shq1	78	47.262	Eptatretus_burgeri
ENSPMEG00000011076	shq1	77	57.263	ENSEASG00005002237	SHQ1	60	58.333	Equus_asinus_asinus
ENSPMEG00000011076	shq1	77	57.821	ENSECAG00000015673	SHQ1	59	58.908	Equus_caballus
ENSPMEG00000011076	shq1	77	58.263	ENSEEUG00000010568	SHQ1	60	58.621	Erinaceus_europaeus
ENSPMEG00000011076	shq1	97	61.048	ENSELUG00000003476	shq1	74	59.594	Esox_lucius
ENSPMEG00000011076	shq1	98	49.367	ENSFCAG00000012781	SHQ1	61	57.759	Felis_catus
ENSPMEG00000011076	shq1	71	61.329	ENSFALG00000013428	SHQ1	57	60.227	Ficedula_albicollis
ENSPMEG00000011076	shq1	85	52.228	ENSFDAG00000005595	SHQ1	62	51.733	Fukomys_damarensis
ENSPMEG00000011076	shq1	98	76.559	ENSFHEG00000017552	shq1	79	75.647	Fundulus_heteroclitus
ENSPMEG00000011076	shq1	66	69.900	ENSGMOG00000007350	shq1	77	69.900	Gadus_morhua
ENSPMEG00000011076	shq1	96	49.149	ENSGALG00000007798	SHQ1	56	58.501	Gallus_gallus
ENSPMEG00000011076	shq1	66	76.254	ENSGACG00000011797	shq1	77	76.589	Gasterosteus_aculeatus
ENSPMEG00000011076	shq1	96	50.531	ENSGGOG00000034818	SHQ1	63	57.471	Gorilla_gorilla
ENSPMEG00000011076	shq1	98	67.160	ENSHBUG00000010857	shq1	77	66.523	Haplochromis_burtoni
ENSPMEG00000011076	shq1	96	46.804	ENSHGLG00000003637	SHQ1	54	56.609	Heterocephalus_glaber_female
ENSPMEG00000011076	shq1	96	46.998	ENSHGLG00100011957	SHQ1	54	56.609	Heterocephalus_glaber_male
ENSPMEG00000011076	shq1	96	62.332	ENSHCOG00000010799	shq1	76	61.124	Hippocampus_comes
ENSPMEG00000011076	shq1	76	61.111	ENSIPUG00000001247	shq1	59	61.111	Ictalurus_punctatus
ENSPMEG00000011076	shq1	95	50.392	ENSSTOG00000010043	SHQ1	63	55.460	Ictidomys_tridecemlineatus
ENSPMEG00000011076	shq1	71	58.410	ENSJJAG00000017611	Shq1	61	58.908	Jaculus_jaculus
ENSPMEG00000011076	shq1	97	70.379	ENSKMAG00000004457	shq1	76	70.759	Kryptolebias_marmoratus
ENSPMEG00000011076	shq1	77	57.143	ENSLACG00000014243	SHQ1	52	57.143	Latimeria_chalumnae
ENSPMEG00000011076	shq1	77	62.745	ENSLOCG00000009970	shq1	61	63.533	Lepisosteus_oculatus
ENSPMEG00000011076	shq1	96	50.531	ENSMFAG00000039148	SHQ1	63	58.046	Macaca_fascicularis
ENSPMEG00000011076	shq1	96	50.531	ENSMMUG00000009571	SHQ1	63	58.046	Macaca_mulatta
ENSPMEG00000011076	shq1	96	50.531	ENSMNEG00000032667	SHQ1	60	58.046	Macaca_nemestrina
ENSPMEG00000011076	shq1	96	50.743	ENSMLEG00000038493	SHQ1	60	58.046	Mandrillus_leucophaeus
ENSPMEG00000011076	shq1	97	66.596	ENSMAMG00000023432	shq1	73	68.723	Mastacembelus_armatus
ENSPMEG00000011076	shq1	98	67.407	ENSMZEG00005008649	shq1	77	66.955	Maylandia_zebra
ENSPMEG00000011076	shq1	96	49.565	ENSMGAG00000009640	SHQ1	57	57.471	Meleagris_gallopavo
ENSPMEG00000011076	shq1	75	58.333	ENSMAUG00000022030	Shq1	61	57.184	Mesocricetus_auratus
ENSPMEG00000011076	shq1	75	56.609	ENSMICG00000009224	SHQ1	64	57.184	Microcebus_murinus
ENSPMEG00000011076	shq1	77	56.704	ENSMOCG00000017836	Shq1	61	57.184	Microtus_ochrogaster
ENSPMEG00000011076	shq1	97	65.142	ENSMMOG00000010569	shq1	76	63.755	Mola_mola
ENSPMEG00000011076	shq1	75	56.160	ENSMODG00000003926	SHQ1	62	55.874	Monodelphis_domestica
ENSPMEG00000011076	shq1	97	70.153	ENSMALG00000008870	shq1	75	68.293	Monopterus_albus
ENSPMEG00000011076	shq1	78	55.402	MGP_CAROLIEiJ_G0028689	Shq1	61	56.609	Mus_caroli
ENSPMEG00000011076	shq1	96	47.826	ENSMUSG00000035378	Shq1	61	56.897	Mus_musculus
ENSPMEG00000011076	shq1	79	56.319	MGP_PahariEiJ_G0022440	Shq1	61	58.046	Mus_pahari
ENSPMEG00000011076	shq1	96	47.826	MGP_SPRETEiJ_G0029717	Shq1	61	56.897	Mus_spretus
ENSPMEG00000011076	shq1	96	48.723	ENSMPUG00000017006	SHQ1	59	57.471	Mustela_putorius_furo
ENSPMEG00000011076	shq1	78	54.270	ENSMLUG00000013539	SHQ1	66	55.460	Myotis_lucifugus
ENSPMEG00000011076	shq1	88	45.707	ENSNGAG00000023317	Shq1	59	49.263	Nannospalax_galili
ENSPMEG00000011076	shq1	98	67.160	ENSNBRG00000024004	shq1	90	66.739	Neolamprologus_brichardi
ENSPMEG00000011076	shq1	96	51.168	ENSNLEG00000002731	SHQ1	63	57.759	Nomascus_leucogenys
ENSPMEG00000011076	shq1	76	40.656	ENSMEUG00000009350	-	50	43.173	Notamacropus_eugenii
ENSPMEG00000011076	shq1	95	49.608	ENSODEG00000009192	SHQ1	64	57.061	Octodon_degus
ENSPMEG00000011076	shq1	98	66.749	ENSONIG00000020264	shq1	77	66.595	Oreochromis_niloticus
ENSPMEG00000011076	shq1	98	46.058	ENSOCUG00000016695	SHQ1	59	58.046	Oryctolagus_cuniculus
ENSPMEG00000011076	shq1	98	67.865	ENSORLG00000023538	shq1	79	66.667	Oryzias_latipes
ENSPMEG00000011076	shq1	98	68.090	ENSORLG00020003697	shq1	78	66.892	Oryzias_latipes_hni
ENSPMEG00000011076	shq1	98	67.640	ENSORLG00015021040	shq1	79	66.441	Oryzias_latipes_hsok
ENSPMEG00000011076	shq1	98	67.265	ENSOMEG00000001225	shq1	80	67.489	Oryzias_melastigma
ENSPMEG00000011076	shq1	95	50.000	ENSOGAG00000003898	SHQ1	60	56.897	Otolemur_garnettii
ENSPMEG00000011076	shq1	79	52.861	ENSOARG00000009547	SHQ1	60	56.125	Ovis_aries
ENSPMEG00000011076	shq1	93	46.032	ENSPPAG00000043263	-	56	51.000	Pan_paniscus
ENSPMEG00000011076	shq1	96	50.955	ENSPPAG00000027714	SHQ1	63	58.046	Pan_paniscus
ENSPMEG00000011076	shq1	98	46.076	ENSPPRG00000004769	SHQ1	60	57.759	Panthera_pardus
ENSPMEG00000011076	shq1	97	45.116	ENSPTIG00000011478	SHQ1	60	57.357	Panthera_tigris_altaica
ENSPMEG00000011076	shq1	93	45.646	ENSPTRG00000048303	-	56	50.498	Pan_troglodytes
ENSPMEG00000011076	shq1	96	51.168	ENSPTRG00000015106	SHQ1	63	58.046	Pan_troglodytes
ENSPMEG00000011076	shq1	95	51.345	ENSPANG00000002881	SHQ1	63	58.333	Papio_anubis
ENSPMEG00000011076	shq1	74	64.072	ENSPKIG00000021517	shq1	56	63.240	Paramormyrops_kingsleyae
ENSPMEG00000011076	shq1	95	50.614	ENSPSIG00000005536	SHQ1	57	59.091	Pelodiscus_sinensis
ENSPMEG00000011076	shq1	98	55.677	ENSPMGG00000008838	shq1	77	56.579	Periophthalmus_magnuspinnatus
ENSPMEG00000011076	shq1	67	58.387	ENSPEMG00000000251	Shq1	61	56.609	Peromyscus_maniculatus_bairdii
ENSPMEG00000011076	shq1	77	52.235	ENSPMAG00000005372	shq1	73	54.434	Petromyzon_marinus
ENSPMEG00000011076	shq1	100	98.724	ENSPFOG00000003118	shq1	84	98.234	Poecilia_formosa
ENSPMEG00000011076	shq1	100	95.153	ENSPREG00000000591	shq1	87	94.235	Poecilia_reticulata
ENSPMEG00000011076	shq1	96	50.743	ENSPPYG00000013717	SHQ1	60	58.046	Pongo_abelii
ENSPMEG00000011076	shq1	71	58.912	ENSPCAG00000009035	SHQ1	61	58.453	Procavia_capensis
ENSPMEG00000011076	shq1	71	54.878	ENSPCOG00000008415	SHQ1	60	56.734	Propithecus_coquereli
ENSPMEG00000011076	shq1	97	49.880	ENSPVAG00000017392	SHQ1	60	57.471	Pteropus_vampyrus
ENSPMEG00000011076	shq1	98	66.749	ENSPNYG00000003878	shq1	77	65.517	Pundamilia_nyererei
ENSPMEG00000011076	shq1	75	63.501	ENSPNAG00000026840	shq1	56	63.450	Pygocentrus_nattereri
ENSPMEG00000011076	shq1	78	56.389	ENSRNOG00000005433	Shq1	68	57.550	Rattus_norvegicus
ENSPMEG00000011076	shq1	96	48.596	ENSRBIG00000026280	SHQ1	63	55.588	Rhinopithecus_bieti
ENSPMEG00000011076	shq1	97	49.761	ENSRROG00000034126	SHQ1	60	58.333	Rhinopithecus_roxellana
ENSPMEG00000011076	shq1	98	49.282	ENSSBOG00000021038	SHQ1	58	59.547	Saimiri_boliviensis_boliviensis
ENSPMEG00000011076	shq1	75	57.307	ENSSHAG00000015077	SHQ1	62	57.307	Sarcophilus_harrisii
ENSPMEG00000011076	shq1	86	60.925	ENSSFOG00015016241	shq1	62	65.882	Scleropages_formosus
ENSPMEG00000011076	shq1	97	67.756	ENSSMAG00000016151	shq1	76	66.812	Scophthalmus_maximus
ENSPMEG00000011076	shq1	99	66.456	ENSSDUG00000011986	shq1	76	66.953	Seriola_dumerili
ENSPMEG00000011076	shq1	97	67.160	ENSSLDG00000013908	shq1	76	66.091	Seriola_lalandi_dorsalis
ENSPMEG00000011076	shq1	96	48.827	ENSSPUG00000011526	-	87	48.614	Sphenodon_punctatus
ENSPMEG00000011076	shq1	98	45.859	ENSSSCG00000011518	SHQ1	60	57.759	Sus_scrofa
ENSPMEG00000011076	shq1	71	60.909	ENSTGUG00000009933	SHQ1	61	60.452	Taeniopygia_guttata
ENSPMEG00000011076	shq1	98	59.158	ENSTRUG00000009446	shq1	78	60.131	Takifugu_rubripes
ENSPMEG00000011076	shq1	75	67.733	ENSTNIG00000007354	shq1	76	67.536	Tetraodon_nigroviridis
ENSPMEG00000011076	shq1	99	48.227	ENSTTRG00000005320	SHQ1	60	56.609	Tursiops_truncatus
ENSPMEG00000011076	shq1	99	47.569	ENSUMAG00000024031	SHQ1	58	58.112	Ursus_maritimus
ENSPMEG00000011076	shq1	61	62.651	ENSVPAG00000004880	SHQ1	58	59.547	Vicugna_pacos
ENSPMEG00000011076	shq1	96	48.712	ENSVVUG00000013906	SHQ1	60	57.471	Vulpes_vulpes
ENSPMEG00000011076	shq1	77	58.074	ENSXETG00000032215	shq1	56	57.637	Xenopus_tropicalis