EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000011085 (Gene tree)
Gene ID: 106921580
Gene Symbol: larp6a
Alias: -
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 7300 bases
Position: chrKQ551479.1:93059-100358
Accession: 106921580
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000009257	La	PF05383.17	1.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000001099	-	3745	XM_014993350	ENSPMEP00000009257	690 (aa)	XP_014848836	UPI00072DF237

Gene Model

Click here to download ENSPMEG00000011085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000011085's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000011085	larp6a	58	31.407	ENSPMEG00000019947	-	94	31.407

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000011085	larp6a	63	59.417	ENSG00000166173	LARP6	87	59.417	Homo_sapiens
ENSPMEG00000011085	larp6a	100	86.083	ENSAPOG00000021773	larp6a	100	85.653	Acanthochromis_polyacanthus
ENSPMEG00000011085	larp6a	61	60.508	ENSAMEG00000008897	LARP6	97	60.508	Ailuropoda_melanoleuca
ENSPMEG00000011085	larp6a	73	92.262	ENSACIG00000005166	larp6a	100	92.262	Amphilophus_citrinellus
ENSPMEG00000011085	larp6a	100	85.612	ENSAOCG00000002284	larp6a	100	85.755	Amphiprion_ocellaris
ENSPMEG00000011085	larp6a	74	91.033	ENSAPEG00000008077	larp6a	100	91.033	Amphiprion_percula
ENSPMEG00000011085	larp6a	100	83.954	ENSATEG00000004018	larp6a	100	84.241	Anabas_testudineus
ENSPMEG00000011085	larp6a	60	60.280	ENSAPLG00000009914	LARP6	98	60.280	Anas_platyrhynchos
ENSPMEG00000011085	larp6a	61	60.284	ENSACAG00000008613	LARP6	99	60.093	Anolis_carolinensis
ENSPMEG00000011085	larp6a	63	59.641	ENSANAG00000024860	LARP6	87	59.641	Aotus_nancymaae
ENSPMEG00000011085	larp6a	100	84.294	ENSACLG00000018561	larp6a	97	84.294	Astatotilapia_calliptera
ENSPMEG00000011085	larp6a	77	79.352	ENSAMXG00000029387	larp6a	98	77.909	Astyanax_mexicanus
ENSPMEG00000011085	larp6a	60	39.860	ENSAMXG00000036816	-	94	41.259	Astyanax_mexicanus
ENSPMEG00000011085	larp6a	63	59.865	ENSBTAG00000003915	LARP6	87	59.865	Bos_taurus
ENSPMEG00000011085	larp6a	67	56.495	ENSCJAG00000046236	-	87	58.876	Callithrix_jacchus
ENSPMEG00000011085	larp6a	62	59.326	ENSCJAG00000018642	-	87	59.326	Callithrix_jacchus
ENSPMEG00000011085	larp6a	60	60.277	ENSCAFG00000017616	LARP6	97	60.093	Canis_familiaris
ENSPMEG00000011085	larp6a	67	57.819	ENSCAFG00020007296	LARP6	88	59.598	Canis_lupus_dingo
ENSPMEG00000011085	larp6a	63	59.865	ENSCHIG00000013742	LARP6	87	59.865	Capra_hircus
ENSPMEG00000011085	larp6a	62	58.998	ENSTSYG00000028124	LARP6	86	58.998	Carlito_syrichta
ENSPMEG00000011085	larp6a	60	59.251	ENSCAPG00000015452	LARP6	97	58.974	Cavia_aperea
ENSPMEG00000011085	larp6a	67	56.415	ENSCPOG00000022687	LARP6	87	58.652	Cavia_porcellus
ENSPMEG00000011085	larp6a	63	59.641	ENSCCAG00000036320	LARP6	87	59.641	Cebus_capucinus
ENSPMEG00000011085	larp6a	63	59.417	ENSCATG00000042432	LARP6	87	59.417	Cercocebus_atys
ENSPMEG00000011085	larp6a	64	59.031	ENSCLAG00000007893	LARP6	97	56.768	Chinchilla_lanigera
ENSPMEG00000011085	larp6a	63	59.417	ENSCSAG00000013672	LARP6	87	59.417	Chlorocebus_sabaeus
ENSPMEG00000011085	larp6a	63	59.193	ENSCHOG00000003318	LARP6	90	59.193	Choloepus_hoffmanni
ENSPMEG00000011085	larp6a	67	60.851	ENSCPBG00000010771	LARP6	88	60.851	Chrysemys_picta_bellii
ENSPMEG00000011085	larp6a	60	59.861	ENSCANG00000025833	LARP6	98	59.861	Colobus_angolensis_palliatus
ENSPMEG00000011085	larp6a	63	59.821	ENSCGRG00001024472	Larp6	87	59.821	Cricetulus_griseus_chok1gshd
ENSPMEG00000011085	larp6a	63	59.821	ENSCGRG00000004527	Larp6	87	59.821	Cricetulus_griseus_crigri
ENSPMEG00000011085	larp6a	91	83.466	ENSCSEG00000011196	larp6a	96	82.791	Cynoglossus_semilaevis
ENSPMEG00000011085	larp6a	100	89.322	ENSCVAG00000009605	larp6a	100	89.466	Cyprinodon_variegatus
ENSPMEG00000011085	larp6a	69	82.390	ENSDARG00000005355	larp6a	99	84.527	Danio_rerio
ENSPMEG00000011085	larp6a	63	58.691	ENSDNOG00000042993	LARP6	87	58.691	Dasypus_novemcinctus
ENSPMEG00000011085	larp6a	67	55.165	ENSDORG00000023910	Larp6	88	58.889	Dipodomys_ordii
ENSPMEG00000011085	larp6a	63	60.314	ENSEASG00005005490	LARP6	64	60.314	Equus_asinus_asinus
ENSPMEG00000011085	larp6a	63	60.314	ENSECAG00000014190	LARP6	96	59.598	Equus_caballus
ENSPMEG00000011085	larp6a	100	72.908	ENSELUG00000007341	larp6a	100	72.365	Esox_lucius
ENSPMEG00000011085	larp6a	63	58.969	ENSFCAG00000001361	LARP6	87	58.969	Felis_catus
ENSPMEG00000011085	larp6a	67	59.494	ENSFALG00000012389	LARP6	97	59.494	Ficedula_albicollis
ENSPMEG00000011085	larp6a	62	59.318	ENSFDAG00000019994	LARP6	83	59.318	Fukomys_damarensis
ENSPMEG00000011085	larp6a	100	92.464	ENSFHEG00000010312	larp6a	100	92.174	Fundulus_heteroclitus
ENSPMEG00000011085	larp6a	62	60.948	ENSGALG00000004046	LARP6	87	60.948	Gallus_gallus
ENSPMEG00000011085	larp6a	100	94.783	ENSGAFG00000009426	larp6a	100	94.493	Gambusia_affinis
ENSPMEG00000011085	larp6a	62	89.302	ENSGACG00000014622	larp6a	99	89.302	Gasterosteus_aculeatus
ENSPMEG00000011085	larp6a	62	59.039	ENSGAGG00000010802	LARP6	63	59.039	Gopherus_agassizii
ENSPMEG00000011085	larp6a	60	59.861	ENSGGOG00000024151	LARP6	98	59.861	Gorilla_gorilla
ENSPMEG00000011085	larp6a	100	84.294	ENSHBUG00000021014	larp6a	97	84.294	Haplochromis_burtoni
ENSPMEG00000011085	larp6a	63	60.314	ENSHGLG00000015112	LARP6	95	58.111	Heterocephalus_glaber_female
ENSPMEG00000011085	larp6a	60	60.789	ENSHGLG00100013159	LARP6	98	60.789	Heterocephalus_glaber_male
ENSPMEG00000011085	larp6a	71	85.859	ENSHCOG00000001241	larp6a	100	83.237	Hippocampus_comes
ENSPMEG00000011085	larp6a	100	63.432	ENSIPUG00000010187	larp6	100	64.557	Ictalurus_punctatus
ENSPMEG00000011085	larp6a	63	59.193	ENSSTOG00000024279	LARP6	93	59.193	Ictidomys_tridecemlineatus
ENSPMEG00000011085	larp6a	63	58.744	ENSJJAG00000011013	Larp6	96	56.557	Jaculus_jaculus
ENSPMEG00000011085	larp6a	100	80.250	ENSKMAG00000001702	larp6a	100	80.628	Kryptolebias_marmoratus
ENSPMEG00000011085	larp6a	74	87.135	ENSLBEG00000000170	larp6a	100	87.135	Labrus_bergylta
ENSPMEG00000011085	larp6a	69	63.374	ENSLACG00000018706	LARP6	91	64.050	Latimeria_chalumnae
ENSPMEG00000011085	larp6a	60	44.550	ENSLACG00000002786	-	95	45.261	Latimeria_chalumnae
ENSPMEG00000011085	larp6a	100	65.036	ENSLOCG00000014592	larp6a	100	64.604	Lepisosteus_oculatus
ENSPMEG00000011085	larp6a	59	43.632	ENSLOCG00000008547	-	80	45.626	Lepisosteus_oculatus
ENSPMEG00000011085	larp6a	63	60.090	ENSLAFG00000016343	LARP6	96	60.090	Loxodonta_africana
ENSPMEG00000011085	larp6a	63	59.417	ENSMFAG00000035507	LARP6	96	59.417	Macaca_fascicularis
ENSPMEG00000011085	larp6a	63	59.417	ENSMMUG00000004429	LARP6	90	59.417	Macaca_mulatta
ENSPMEG00000011085	larp6a	63	59.417	ENSMNEG00000045335	LARP6	87	59.417	Macaca_nemestrina
ENSPMEG00000011085	larp6a	60	59.861	ENSMLEG00000038587	LARP6	98	59.861	Mandrillus_leucophaeus
ENSPMEG00000011085	larp6a	100	83.885	ENSMAMG00000005261	larp6a	100	83.885	Mastacembelus_armatus
ENSPMEG00000011085	larp6a	100	84.438	ENSMZEG00005005774	larp6a	97	84.438	Maylandia_zebra
ENSPMEG00000011085	larp6a	60	62.441	ENSMGAG00000005077	LARP6	98	62.295	Meleagris_gallopavo
ENSPMEG00000011085	larp6a	63	58.969	ENSMAUG00000018486	Larp6	87	59.417	Mesocricetus_auratus
ENSPMEG00000011085	larp6a	63	58.744	ENSMICG00000011234	LARP6	95	56.818	Microcebus_murinus
ENSPMEG00000011085	larp6a	63	59.641	ENSMOCG00000010492	Larp6	87	59.641	Microtus_ochrogaster
ENSPMEG00000011085	larp6a	74	87.329	ENSMMOG00000016284	larp6a	100	87.329	Mola_mola
ENSPMEG00000011085	larp6a	63	56.629	ENSMODG00000009034	LARP6	98	52.941	Monodelphis_domestica
ENSPMEG00000011085	larp6a	73	88.690	ENSMALG00000014439	larp6a	98	88.690	Monopterus_albus
ENSPMEG00000011085	larp6a	64	59.031	MGP_CAROLIEiJ_G0032314	Larp6	87	59.417	Mus_caroli
ENSPMEG00000011085	larp6a	64	58.811	ENSMUSG00000034839	Larp6	87	59.193	Mus_musculus
ENSPMEG00000011085	larp6a	64	58.811	MGP_PahariEiJ_G0015180	Larp6	87	59.193	Mus_pahari
ENSPMEG00000011085	larp6a	64	59.031	MGP_SPRETEiJ_G0033452	Larp6	87	59.417	Mus_spretus
ENSPMEG00000011085	larp6a	62	59.502	ENSMPUG00000017086	LARP6	97	59.722	Mustela_putorius_furo
ENSPMEG00000011085	larp6a	62	59.551	ENSMLUG00000010319	LARP6	87	59.551	Myotis_lucifugus
ENSPMEG00000011085	larp6a	63	59.417	ENSNGAG00000014238	Larp6	87	59.417	Nannospalax_galili
ENSPMEG00000011085	larp6a	74	91.423	ENSNBRG00000008120	larp6a	100	91.423	Neolamprologus_brichardi
ENSPMEG00000011085	larp6a	63	59.417	ENSNLEG00000013691	LARP6	88	59.417	Nomascus_leucogenys
ENSPMEG00000011085	larp6a	52	65.385	ENSMEUG00000002270	LARP6	75	67.213	Notamacropus_eugenii
ENSPMEG00000011085	larp6a	51	54.918	ENSOPRG00000004868	-	99	55.616	Ochotona_princeps
ENSPMEG00000011085	larp6a	67	57.796	ENSODEG00000015958	LARP6	95	57.620	Octodon_degus
ENSPMEG00000011085	larp6a	74	90.680	ENSONIG00000002901	larp6a	100	90.680	Oreochromis_niloticus
ENSPMEG00000011085	larp6a	59	59.024	ENSOCUG00000009306	LARP6	97	59.338	Oryctolagus_cuniculus
ENSPMEG00000011085	larp6a	72	90.121	ENSORLG00000014256	larp6a	99	90.121	Oryzias_latipes
ENSPMEG00000011085	larp6a	100	83.117	ENSORLG00020019657	larp6a	100	83.117	Oryzias_latipes_hni
ENSPMEG00000011085	larp6a	100	83.838	ENSORLG00015017915	larp6a	100	83.838	Oryzias_latipes_hsok
ENSPMEG00000011085	larp6a	100	84.682	ENSOMEG00000017049	larp6a	100	84.682	Oryzias_melastigma
ENSPMEG00000011085	larp6a	63	58.824	ENSOGAG00000000522	LARP6	87	59.685	Otolemur_garnettii
ENSPMEG00000011085	larp6a	61	60.185	ENSOARG00000018750	LARP6	97	60.185	Ovis_aries
ENSPMEG00000011085	larp6a	60	59.861	ENSPPAG00000031247	LARP6	98	59.861	Pan_paniscus
ENSPMEG00000011085	larp6a	63	58.744	ENSPPRG00000011282	LARP6	87	59.193	Panthera_pardus
ENSPMEG00000011085	larp6a	60	59.861	ENSPTIG00000015318	LARP6	85	59.861	Panthera_tigris_altaica
ENSPMEG00000011085	larp6a	63	59.417	ENSPTRG00000007234	LARP6	87	59.417	Pan_troglodytes
ENSPMEG00000011085	larp6a	63	59.417	ENSPANG00000016362	LARP6	87	59.417	Papio_anubis
ENSPMEG00000011085	larp6a	100	63.181	ENSPKIG00000004511	LARP6	100	62.979	Paramormyrops_kingsleyae
ENSPMEG00000011085	larp6a	100	61.952	ENSPKIG00000020103	larp6a	89	74.840	Paramormyrops_kingsleyae
ENSPMEG00000011085	larp6a	71	91.411	ENSPMGG00000006958	larp6a	98	91.411	Periophthalmus_magnuspinnatus
ENSPMEG00000011085	larp6a	67	56.967	ENSPEMG00000012909	Larp6	87	59.152	Peromyscus_maniculatus_bairdii
ENSPMEG00000011085	larp6a	63	57.366	ENSPCIG00000020765	LARP6	83	57.366	Phascolarctos_cinereus
ENSPMEG00000011085	larp6a	74	99.029	ENSPFOG00000014175	larp6a	100	99.029	Poecilia_formosa
ENSPMEG00000011085	larp6a	100	98.988	ENSPLAG00000011105	larp6a	100	98.988	Poecilia_latipinna
ENSPMEG00000011085	larp6a	100	98.119	ENSPREG00000008067	larp6a	100	98.119	Poecilia_reticulata
ENSPMEG00000011085	larp6a	63	59.417	ENSPPYG00000006604	LARP6	87	59.417	Pongo_abelii
ENSPMEG00000011085	larp6a	63	58.744	ENSPCOG00000022934	LARP6	87	58.744	Propithecus_coquereli
ENSPMEG00000011085	larp6a	63	60.538	ENSPVAG00000005618	LARP6	95	58.351	Pteropus_vampyrus
ENSPMEG00000011085	larp6a	74	91.033	ENSPNYG00000009835	larp6a	100	91.033	Pundamilia_nyererei
ENSPMEG00000011085	larp6a	72	76.893	ENSPNAG00000017966	larp6a	87	74.488	Pygocentrus_nattereri
ENSPMEG00000011085	larp6a	63	59.821	ENSRNOG00000012438	Larp6	87	59.641	Rattus_norvegicus
ENSPMEG00000011085	larp6a	66	58.051	ENSRBIG00000032902	LARP6	88	59.060	Rhinopithecus_bieti
ENSPMEG00000011085	larp6a	63	59.417	ENSRROG00000043074	LARP6	87	59.417	Rhinopithecus_roxellana
ENSPMEG00000011085	larp6a	60	60.093	ENSSBOG00000024190	LARP6	98	60.093	Saimiri_boliviensis_boliviensis
ENSPMEG00000011085	larp6a	62	54.920	ENSSHAG00000018495	LARP6	99	56.064	Sarcophilus_harrisii
ENSPMEG00000011085	larp6a	69	72.746	ENSSFOG00015002254	LARP6	98	69.882	Scleropages_formosus
ENSPMEG00000011085	larp6a	63	77.367	ENSSFOG00015023268	larp6a	95	72.895	Scleropages_formosus
ENSPMEG00000011085	larp6a	100	80.824	ENSSMAG00000009953	larp6a	100	81.392	Scophthalmus_maximus
ENSPMEG00000011085	larp6a	100	83.429	ENSSDUG00000007438	larp6a	100	83.429	Seriola_dumerili
ENSPMEG00000011085	larp6a	100	83.668	ENSSLDG00000016647	larp6a	100	83.668	Seriola_lalandi_dorsalis
ENSPMEG00000011085	larp6a	61	61.882	ENSSPUG00000011312	LARP6	98	61.882	Sphenodon_punctatus
ENSPMEG00000011085	larp6a	100	85.960	ENSSPAG00000020502	larp6a	100	85.530	Stegastes_partitus
ENSPMEG00000011085	larp6a	63	59.641	ENSSSCG00000004974	LARP6	87	59.641	Sus_scrofa
ENSPMEG00000011085	larp6a	60	60.748	ENSTGUG00000005808	LARP6	98	60.748	Taeniopygia_guttata
ENSPMEG00000011085	larp6a	100	75.252	ENSTRUG00000003151	larp6a	100	75.683	Takifugu_rubripes
ENSPMEG00000011085	larp6a	70	83.333	ENSTNIG00000011926	larp6a	100	83.333	Tetraodon_nigroviridis
ENSPMEG00000011085	larp6a	60	59.259	ENSTBEG00000015077	LARP6	98	59.259	Tupaia_belangeri
ENSPMEG00000011085	larp6a	62	59.864	ENSUAMG00000010467	LARP6	84	60.277	Ursus_americanus
ENSPMEG00000011085	larp6a	62	59.637	ENSVVUG00000015227	LARP6	93	59.861	Vulpes_vulpes
ENSPMEG00000011085	larp6a	66	63.034	ENSXETG00000020340	larp6	93	62.658	Xenopus_tropicalis
ENSPMEG00000011085	larp6a	69	98.109	ENSXCOG00000012654	larp6a	98	98.109	Xiphophorus_couchianus
ENSPMEG00000011085	larp6a	100	96.377	ENSXMAG00000021015	larp6a	96	96.377	Xiphophorus_maculatus