EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000011115 (Gene tree)
Gene ID: 106907247
Gene Symbol: PUS1
Alias: -
Full Name: tRNA pseudouridine synthase A%2C mitochondrial-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 9141 bases
Position: chrKQ553505.1:5846-14986
Accession: 106907247
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000009278	PseudoU_synth_1	PF01416.20	3.6e-15	1	1
ENSPMEP00000027016	PseudoU_synth_1	PF01416.20	3.6e-15	1	1
ENSPMEP00000009284	PseudoU_synth_1	PF01416.20	3.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000001053	PUS1-201	1776	-	ENSPMEP00000027016	413 (aa)	-	-
ENSPMET00000001060	PUS1-202	2106	-	ENSPMEP00000009278	413 (aa)	-	-
ENSPMET00000001066	PUS1-203	2008	XM_014972844	ENSPMEP00000009284	417 (aa)	XP_014828330	UPI00072EDE28

Gene Model

Click here to download ENSPMEG00000011115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000011115's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000011115	PUS1	100	100.000	ENSPMEG00000006038	pus1	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000011115	PUS1	89	66.667	ENSG00000177192	PUS1	91	69.231	Homo_sapiens
ENSPMEG00000011115	PUS1	100	83.610	ENSAPOG00000007254	pus1	100	83.610	Acanthochromis_polyacanthus
ENSPMEG00000011115	PUS1	91	65.867	ENSAMEG00000013715	PUS1	90	66.043	Ailuropoda_melanoleuca
ENSPMEG00000011115	PUS1	100	78.759	ENSACIG00000009169	pus1	100	78.759	Amphilophus_citrinellus
ENSPMEG00000011115	PUS1	100	84.798	ENSAOCG00000022207	pus1	100	84.798	Amphiprion_ocellaris
ENSPMEG00000011115	PUS1	100	84.561	ENSAPEG00000006039	pus1	99	85.678	Amphiprion_percula
ENSPMEG00000011115	PUS1	93	83.887	ENSATEG00000020688	pus1	100	83.887	Anabas_testudineus
ENSPMEG00000011115	PUS1	83	71.637	ENSACAG00000007367	PUS1	91	71.637	Anolis_carolinensis
ENSPMEG00000011115	PUS1	73	72.517	ENSANAG00000036192	PUS1	92	72.517	Aotus_nancymaae
ENSPMEG00000011115	PUS1	100	83.135	ENSACLG00000020868	pus1	100	84.399	Astatotilapia_calliptera
ENSPMEG00000011115	PUS1	99	69.431	ENSAMXG00000008710	pus1	97	69.431	Astyanax_mexicanus
ENSPMEG00000011115	PUS1	73	30.028	ENSBTAG00000014339	PUS3	66	30.028	Bos_taurus
ENSPMEG00000011115	PUS1	92	64.116	ENSBTAG00000012990	PUS1	93	64.628	Bos_taurus
ENSPMEG00000011115	PUS1	83	38.547	WBGene00004248	pus-1	85	37.640	Caenorhabditis_elegans
ENSPMEG00000011115	PUS1	62	68.504	ENSCJAG00000003720	PUS1	70	68.482	Callithrix_jacchus
ENSPMEG00000011115	PUS1	88	66.486	ENSCAFG00000006429	PUS1	87	69.628	Canis_familiaris
ENSPMEG00000011115	PUS1	84	69.628	ENSCAFG00020010737	PUS1	81	69.628	Canis_lupus_dingo
ENSPMEG00000011115	PUS1	92	64.644	ENSCHIG00000000487	PUS1	93	65.160	Capra_hircus
ENSPMEG00000011115	PUS1	83	70.468	ENSTSYG00000032605	PUS1	99	67.935	Carlito_syrichta
ENSPMEG00000011115	PUS1	72	71.572	ENSCAPG00000006421	PUS1	96	69.775	Cavia_aperea
ENSPMEG00000011115	PUS1	83	68.713	ENSCPOG00000001027	PUS1	81	68.497	Cavia_porcellus
ENSPMEG00000011115	PUS1	85	66.852	ENSCCAG00000015879	PUS1	84	71.711	Cebus_capucinus
ENSPMEG00000011115	PUS1	84	69.075	ENSCATG00000032870	PUS1	83	72.039	Cercocebus_atys
ENSPMEG00000011115	PUS1	83	68.421	ENSCLAG00000011689	PUS1	87	64.865	Chinchilla_lanigera
ENSPMEG00000011115	PUS1	90	65.957	ENSCSAG00000001879	PUS1	87	65.957	Chlorocebus_sabaeus
ENSPMEG00000011115	PUS1	76	71.656	ENSCPBG00000024715	PUS1	92	69.753	Chrysemys_picta_bellii
ENSPMEG00000011115	PUS1	79	45.872	ENSCING00000009426	-	87	45.872	Ciona_intestinalis
ENSPMEG00000011115	PUS1	77	44.201	ENSCSAVG00000003751	-	66	44.201	Ciona_savignyi
ENSPMEG00000011115	PUS1	88	59.946	ENSCANG00000035561	PUS1	95	58.073	Colobus_angolensis_palliatus
ENSPMEG00000011115	PUS1	86	67.500	ENSCGRG00001019592	Pus1	85	65.147	Cricetulus_griseus_chok1gshd
ENSPMEG00000011115	PUS1	86	67.500	ENSCGRG00000004048	Pus1	87	69.883	Cricetulus_griseus_crigri
ENSPMEG00000011115	PUS1	100	74.347	ENSCSEG00000003629	pus1	100	74.347	Cynoglossus_semilaevis
ENSPMEG00000011115	PUS1	100	87.050	ENSCVAG00000001265	pus1	100	87.050	Cyprinodon_variegatus
ENSPMEG00000011115	PUS1	100	63.270	ENSDARG00000045562	pus1	97	75.368	Danio_rerio
ENSPMEG00000011115	PUS1	84	67.147	ENSDNOG00000045576	PUS1	99	67.178	Dasypus_novemcinctus
ENSPMEG00000011115	PUS1	78	68.519	ENSDORG00000011455	Pus1	99	68.519	Dipodomys_ordii
ENSPMEG00000011115	PUS1	82	46.857	FBgn0038811	PUS1	84	46.857	Drosophila_melanogaster
ENSPMEG00000011115	PUS1	83	69.591	ENSETEG00000019160	PUS1	84	69.679	Echinops_telfairi
ENSPMEG00000011115	PUS1	83	44.628	ENSEBUG00000000368	-	68	43.716	Eptatretus_burgeri
ENSPMEG00000011115	PUS1	84	68.876	ENSEASG00005016535	PUS1	80	68.876	Equus_asinus_asinus
ENSPMEG00000011115	PUS1	84	68.876	ENSECAG00000006965	PUS1	87	68.876	Equus_caballus
ENSPMEG00000011115	PUS1	93	75.192	ENSELUG00000010424	pus1	99	75.192	Esox_lucius
ENSPMEG00000011115	PUS1	84	68.497	ENSFCAG00000010780	PUS1	81	68.497	Felis_catus
ENSPMEG00000011115	PUS1	94	64.646	ENSFALG00000008273	PUS1	95	63.457	Ficedula_albicollis
ENSPMEG00000011115	PUS1	85	68.169	ENSFDAG00000012518	PUS1	88	67.218	Fukomys_damarensis
ENSPMEG00000011115	PUS1	100	88.995	ENSFHEG00000010504	pus1	100	88.995	Fundulus_heteroclitus
ENSPMEG00000011115	PUS1	94	74.425	ENSGMOG00000008143	pus1	99	74.425	Gadus_morhua
ENSPMEG00000011115	PUS1	89	68.548	ENSGALG00000002354	PUS1	93	66.841	Gallus_gallus
ENSPMEG00000011115	PUS1	100	95.923	ENSGAFG00000006578	pus1	100	95.923	Gambusia_affinis
ENSPMEG00000011115	PUS1	100	81.710	ENSGACG00000017566	pus1	99	83.376	Gasterosteus_aculeatus
ENSPMEG00000011115	PUS1	79	68.085	ENSGAGG00000016730	-	94	68.085	Gopherus_agassizii
ENSPMEG00000011115	PUS1	92	65.365	ENSGGOG00000009178	PUS1	87	69.018	Gorilla_gorilla
ENSPMEG00000011115	PUS1	100	83.610	ENSHBUG00000001316	pus1	100	84.910	Haplochromis_burtoni
ENSPMEG00000011115	PUS1	69	30.284	ENSHGLG00000015753	-	80	30.284	Heterocephalus_glaber_female
ENSPMEG00000011115	PUS1	88	63.836	ENSHGLG00000016086	PUS1	93	63.836	Heterocephalus_glaber_female
ENSPMEG00000011115	PUS1	88	63.562	ENSHGLG00100019362	PUS1	93	63.562	Heterocephalus_glaber_male
ENSPMEG00000011115	PUS1	100	74.702	ENSHCOG00000014288	pus1	96	74.702	Hippocampus_comes
ENSPMEG00000011115	PUS1	93	74.935	ENSIPUG00000010387	pus1	91	77.808	Ictalurus_punctatus
ENSPMEG00000011115	PUS1	62	30.314	ENSSTOG00000003721	PUS3	54	30.314	Ictidomys_tridecemlineatus
ENSPMEG00000011115	PUS1	85	67.324	ENSSTOG00000011245	PUS1	87	65.252	Ictidomys_tridecemlineatus
ENSPMEG00000011115	PUS1	82	69.912	ENSJJAG00000000088	Pus1	80	69.912	Jaculus_jaculus
ENSPMEG00000011115	PUS1	100	77.857	ENSKMAG00000012702	pus1	100	77.857	Kryptolebias_marmoratus
ENSPMEG00000011115	PUS1	95	82.161	ENSLBEG00000002845	pus1	98	82.161	Labrus_bergylta
ENSPMEG00000011115	PUS1	87	68.232	ENSLACG00000018598	PUS1	94	66.491	Latimeria_chalumnae
ENSPMEG00000011115	PUS1	78	57.716	ENSLACG00000016044	-	98	57.716	Latimeria_chalumnae
ENSPMEG00000011115	PUS1	91	68.312	ENSLOCG00000006127	pus1	97	68.312	Lepisosteus_oculatus
ENSPMEG00000011115	PUS1	88	66.033	ENSLAFG00000028731	PUS1	99	65.217	Loxodonta_africana
ENSPMEG00000011115	PUS1	84	69.628	ENSMFAG00000041194	PUS1	90	67.218	Macaca_fascicularis
ENSPMEG00000011115	PUS1	87	67.036	ENSMMUG00000031463	PUS1	87	72.368	Macaca_mulatta
ENSPMEG00000011115	PUS1	84	69.364	ENSMNEG00000002814	PUS1	83	72.368	Macaca_nemestrina
ENSPMEG00000011115	PUS1	74	72.368	ENSMLEG00000043560	PUS1	92	72.517	Mandrillus_leucophaeus
ENSPMEG00000011115	PUS1	100	81.948	ENSMAMG00000007371	pus1	100	81.948	Mastacembelus_armatus
ENSPMEG00000011115	PUS1	100	83.135	ENSMZEG00005017746	pus1	100	83.135	Maylandia_zebra
ENSPMEG00000011115	PUS1	78	71.166	ENSMGAG00000001958	PUS1	99	71.166	Meleagris_gallopavo
ENSPMEG00000011115	PUS1	83	71.345	ENSMAUG00000001482	Pus1	82	69.914	Mesocricetus_auratus
ENSPMEG00000011115	PUS1	88	67.120	ENSMICG00000030980	PUS1	90	67.120	Microcebus_murinus
ENSPMEG00000011115	PUS1	89	66.310	ENSMOCG00000022311	Pus1	88	66.310	Microtus_ochrogaster
ENSPMEG00000011115	PUS1	92	79.101	ENSMMOG00000021022	pus1	99	77.892	Mola_mola
ENSPMEG00000011115	PUS1	82	69.617	ENSMODG00000015551	PUS1	82	67.120	Monodelphis_domestica
ENSPMEG00000011115	PUS1	99	81.022	ENSMALG00000013202	pus1	99	80.714	Monopterus_albus
ENSPMEG00000011115	PUS1	88	67.575	MGP_CAROLIEiJ_G0027551	Pus1	93	67.575	Mus_caroli
ENSPMEG00000011115	PUS1	88	67.575	ENSMUSG00000029507	Pus1	93	67.575	Mus_musculus
ENSPMEG00000011115	PUS1	87	68.132	MGP_PahariEiJ_G0024133	Pus1	88	69.914	Mus_pahari
ENSPMEG00000011115	PUS1	88	67.575	MGP_SPRETEiJ_G0028549	Pus1	93	67.575	Mus_spretus
ENSPMEG00000011115	PUS1	85	68.768	ENSMPUG00000002314	PUS1	88	68.966	Mustela_putorius_furo
ENSPMEG00000011115	PUS1	87	65.289	ENSMLUG00000015790	PUS1	99	65.289	Myotis_lucifugus
ENSPMEG00000011115	PUS1	62	30.314	ENSNGAG00000013868	Pus3	54	30.314	Nannospalax_galili
ENSPMEG00000011115	PUS1	86	68.333	ENSNGAG00000012976	Pus1	85	68.333	Nannospalax_galili
ENSPMEG00000011115	PUS1	93	85.166	ENSNBRG00000020502	pus1	99	86.364	Neolamprologus_brichardi
ENSPMEG00000011115	PUS1	84	67.826	ENSNLEG00000008505	PUS1	92	72.696	Nomascus_leucogenys
ENSPMEG00000011115	PUS1	83	62.791	ENSMEUG00000002825	PUS1	92	62.791	Notamacropus_eugenii
ENSPMEG00000011115	PUS1	84	59.942	ENSOPRG00000002701	-	91	59.942	Ochotona_princeps
ENSPMEG00000011115	PUS1	88	66.304	ENSODEG00000008248	PUS1	91	68.986	Octodon_degus
ENSPMEG00000011115	PUS1	94	83.627	ENSONIG00000003803	pus1	100	83.627	Oreochromis_niloticus
ENSPMEG00000011115	PUS1	82	70.118	ENSOANG00000010619	PUS1	93	62.408	Ornithorhynchus_anatinus
ENSPMEG00000011115	PUS1	80	30.028	ENSOANG00000000406	PUS3	61	31.329	Ornithorhynchus_anatinus
ENSPMEG00000011115	PUS1	87	67.688	ENSOCUG00000007310	PUS1	78	67.218	Oryctolagus_cuniculus
ENSPMEG00000011115	PUS1	100	79.524	ENSORLG00000010787	pus1	100	79.524	Oryzias_latipes
ENSPMEG00000011115	PUS1	100	79.762	ENSORLG00020011483	pus1	100	79.762	Oryzias_latipes_hni
ENSPMEG00000011115	PUS1	100	79.762	ENSORLG00015023012	pus1	99	82.474	Oryzias_latipes_hsok
ENSPMEG00000011115	PUS1	99	79.268	ENSOMEG00000022655	pus1	96	79.268	Oryzias_melastigma
ENSPMEG00000011115	PUS1	88	66.576	ENSOGAG00000008720	PUS1	95	67.391	Otolemur_garnettii
ENSPMEG00000011115	PUS1	73	30.168	ENSOARG00000011870	PUS3	66	30.168	Ovis_aries
ENSPMEG00000011115	PUS1	92	64.380	ENSOARG00000013316	PUS1	87	64.380	Ovis_aries
ENSPMEG00000011115	PUS1	89	66.935	ENSPPAG00000040971	PUS1	87	69.325	Pan_paniscus
ENSPMEG00000011115	PUS1	84	68.497	ENSPPRG00000015456	PUS1	87	68.497	Panthera_pardus
ENSPMEG00000011115	PUS1	83	68.513	ENSPTIG00000004201	PUS1	90	68.497	Panthera_tigris_altaica
ENSPMEG00000011115	PUS1	89	66.935	ENSPTRG00000005643	PUS1	87	69.325	Pan_troglodytes
ENSPMEG00000011115	PUS1	84	69.364	ENSPANG00000000376	PUS1	83	72.368	Papio_anubis
ENSPMEG00000011115	PUS1	93	66.667	ENSPKIG00000019369	pus1	93	64.390	Paramormyrops_kingsleyae
ENSPMEG00000011115	PUS1	98	62.927	ENSPSIG00000016432	PUS1	96	62.864	Pelodiscus_sinensis
ENSPMEG00000011115	PUS1	90	79.032	ENSPMGG00000004522	pus1	96	79.032	Periophthalmus_magnuspinnatus
ENSPMEG00000011115	PUS1	86	68.333	ENSPEMG00000013448	Pus1	81	70.760	Peromyscus_maniculatus_bairdii
ENSPMEG00000011115	PUS1	80	60.790	ENSPMAG00000004636	pus1	99	60.790	Petromyzon_marinus
ENSPMEG00000011115	PUS1	73	61.386	ENSPCIG00000022609	-	75	59.248	Phascolarctos_cinereus
ENSPMEG00000011115	PUS1	100	99.760	ENSPFOG00000019669	pus1	100	99.760	Poecilia_formosa
ENSPMEG00000011115	PUS1	100	99.520	ENSPLAG00000002692	-	100	99.520	Poecilia_latipinna
ENSPMEG00000011115	PUS1	100	99.520	ENSPLAG00000007185	pus1	100	99.520	Poecilia_latipinna
ENSPMEG00000011115	PUS1	95	97.980	ENSPREG00000007231	pus1	99	98.050	Poecilia_reticulata
ENSPMEG00000011115	PUS1	89	66.398	ENSPPYG00000005132	PUS1	87	66.398	Pongo_abelii
ENSPMEG00000011115	PUS1	64	67.293	ENSPCAG00000009110	-	65	67.293	Procavia_capensis
ENSPMEG00000011115	PUS1	83	61.739	ENSPCOG00000015595	PUS1	90	60.490	Propithecus_coquereli
ENSPMEG00000011115	PUS1	100	83.135	ENSPNYG00000013571	pus1	100	83.135	Pundamilia_nyererei
ENSPMEG00000011115	PUS1	98	70.792	ENSPNAG00000003938	pus1	95	70.792	Pygocentrus_nattereri
ENSPMEG00000011115	PUS1	64	30.263	ENSPNAG00000014541	pus3	57	30.263	Pygocentrus_nattereri
ENSPMEG00000011115	PUS1	88	67.030	ENSRNOG00000037500	Pus1	86	67.030	Rattus_norvegicus
ENSPMEG00000011115	PUS1	84	69.653	ENSRBIG00000043177	PUS1	91	67.218	Rhinopithecus_bieti
ENSPMEG00000011115	PUS1	85	67.218	ENSRROG00000039744	PUS1	82	72.500	Rhinopithecus_roxellana
ENSPMEG00000011115	PUS1	80	43.836	YPL212C	-	64	40.588	Saccharomyces_cerevisiae
ENSPMEG00000011115	PUS1	89	64.675	ENSSBOG00000023593	PUS1	93	68.827	Saimiri_boliviensis_boliviensis
ENSPMEG00000011115	PUS1	87	67.582	ENSSHAG00000013193	PUS1	86	67.582	Sarcophilus_harrisii
ENSPMEG00000011115	PUS1	94	68.342	ENSSFOG00015003463	pus1	93	67.237	Scleropages_formosus
ENSPMEG00000011115	PUS1	100	80.048	ENSSMAG00000019075	pus1	100	80.048	Scophthalmus_maximus
ENSPMEG00000011115	PUS1	100	81.948	ENSSDUG00000007102	pus1	100	81.948	Seriola_dumerili
ENSPMEG00000011115	PUS1	100	81.473	ENSSLDG00000022850	pus1	100	81.473	Seriola_lalandi_dorsalis
ENSPMEG00000011115	PUS1	73	62.914	ENSSARG00000008367	PUS1	98	62.706	Sorex_araneus
ENSPMEG00000011115	PUS1	87	68.595	ENSSPUG00000010009	PUS1	91	68.595	Sphenodon_punctatus
ENSPMEG00000011115	PUS1	93	82.353	ENSSPAG00000006272	pus1	99	82.353	Stegastes_partitus
ENSPMEG00000011115	PUS1	73	30.114	ENSSSCG00000015222	PUS3	66	30.114	Sus_scrofa
ENSPMEG00000011115	PUS1	88	66.485	ENSSSCG00000009741	PUS1	91	66.485	Sus_scrofa
ENSPMEG00000011115	PUS1	80	72.121	ENSTGUG00000008068	PUS1	99	72.121	Taeniopygia_guttata
ENSPMEG00000011115	PUS1	90	76.923	ENSTRUG00000002198	pus1	91	79.718	Takifugu_rubripes
ENSPMEG00000011115	PUS1	93	73.146	ENSTNIG00000003942	pus1	98	73.657	Tetraodon_nigroviridis
ENSPMEG00000011115	PUS1	92	63.588	ENSTTRG00000000632	PUS1	89	63.588	Tursiops_truncatus
ENSPMEG00000011115	PUS1	85	68.768	ENSUAMG00000017197	PUS1	88	68.768	Ursus_americanus
ENSPMEG00000011115	PUS1	85	68.768	ENSUMAG00000002831	PUS1	95	72.013	Ursus_maritimus
ENSPMEG00000011115	PUS1	84	69.741	ENSVVUG00000004199	PUS1	79	69.942	Vulpes_vulpes
ENSPMEG00000011115	PUS1	78	48.615	ENSXETG00000033640	-	100	48.615	Xenopus_tropicalis
ENSPMEG00000011115	PUS1	91	65.526	ENSXETG00000002030	pus1	91	66.396	Xenopus_tropicalis
ENSPMEG00000011115	PUS1	95	96.717	ENSXCOG00000004722	pus1	98	96.717	Xiphophorus_couchianus
ENSPMEG00000011115	PUS1	100	96.163	ENSXMAG00000000988	pus1	100	96.163	Xiphophorus_maculatus