EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000011123 (Gene tree)
Gene ID: 106919572
Gene Symbol: vars2
Alias: -
Full Name: valine--tRNA ligase%2C mitochondrial-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 30530 bases
Position: chrKQ551352.1:146799-177328
Accession: 106919572
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000009310	tRNA-synt_1g	PF09334.11	9e-14	1	1
ENSPMEP00000009310	Anticodon_1	PF08264.13	5.5e-33	1	1
ENSPMEP00000009310	tRNA-synt_1	PF00133.22	3.8e-193	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000001044	-	3786	XM_014990033	ENSPMEP00000009310	1078 (aa)	XP_014845519	UPI00072DA827

Gene Model

Click here to download ENSPMEG00000011123's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000011123's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000011123	vars2	93	48.067	ENSPMEG00000004708	vars	78	47.976

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000011123	vars2	95	77.344	ENSAPOG00000007396	vars2	99	75.648	Acanthochromis_polyacanthus
ENSPMEG00000011123	vars2	96	51.066	ENSAMEG00000012997	VARS2	89	52.036	Ailuropoda_melanoleuca
ENSPMEG00000011123	vars2	99	74.280	ENSACIG00000004344	vars2	99	74.280	Amphilophus_citrinellus
ENSPMEG00000011123	vars2	95	77.637	ENSAOCG00000000476	vars2	99	75.926	Amphiprion_ocellaris
ENSPMEG00000011123	vars2	95	77.637	ENSAPEG00000008646	vars2	97	75.926	Amphiprion_percula
ENSPMEG00000011123	vars2	95	78.049	ENSATEG00000012291	vars2	99	76.089	Anabas_testudineus
ENSPMEG00000011123	vars2	97	51.947	ENSACAG00000022093	VARS2	91	53.625	Anolis_carolinensis
ENSPMEG00000011123	vars2	96	50.725	ENSANAG00000038018	VARS2	92	51.632	Aotus_nancymaae
ENSPMEG00000011123	vars2	99	73.655	ENSACLG00000018673	vars2	99	73.655	Astatotilapia_calliptera
ENSPMEG00000011123	vars2	96	67.692	ENSAMXG00000017773	vars2	93	70.304	Astyanax_mexicanus
ENSPMEG00000011123	vars2	95	51.794	ENSBTAG00000010698	VARS2	92	52.731	Bos_taurus
ENSPMEG00000011123	vars2	96	50.531	ENSCJAG00000019826	VARS2	92	51.533	Callithrix_jacchus
ENSPMEG00000011123	vars2	97	51.094	ENSCAFG00000000454	VARS2	92	52.433	Canis_familiaris
ENSPMEG00000011123	vars2	84	55.837	ENSCAFG00020019387	VARS2	89	56.747	Canis_lupus_dingo
ENSPMEG00000011123	vars2	95	51.600	ENSCHIG00000007847	VARS2	92	52.221	Capra_hircus
ENSPMEG00000011123	vars2	95	51.988	ENSTSYG00000009904	VARS2	92	52.778	Carlito_syrichta
ENSPMEG00000011123	vars2	88	53.200	ENSCAPG00000017770	VARS2	99	53.200	Cavia_aperea
ENSPMEG00000011123	vars2	97	51.450	ENSCPOG00000021834	VARS2	93	52.642	Cavia_porcellus
ENSPMEG00000011123	vars2	96	50.725	ENSCCAG00000037907	VARS2	92	51.731	Cebus_capucinus
ENSPMEG00000011123	vars2	95	51.212	ENSCATG00000032554	VARS2	92	52.234	Cercocebus_atys
ENSPMEG00000011123	vars2	97	50.234	ENSCLAG00000002889	VARS2	92	52.135	Chinchilla_lanigera
ENSPMEG00000011123	vars2	95	51.808	ENSCSAG00000008327	VARS2	91	52.853	Chlorocebus_sabaeus
ENSPMEG00000011123	vars2	92	54.463	ENSCPBG00000021502	VARS2	87	64.526	Chrysemys_picta_bellii
ENSPMEG00000011123	vars2	95	50.824	ENSCANG00000014991	VARS2	91	51.837	Colobus_angolensis_palliatus
ENSPMEG00000011123	vars2	95	51.794	ENSCGRG00001021535	Vars2	92	52.632	Cricetulus_griseus_chok1gshd
ENSPMEG00000011123	vars2	95	51.794	ENSCGRG00000014112	Vars2	92	52.632	Cricetulus_griseus_crigri
ENSPMEG00000011123	vars2	99	62.011	ENSCSEG00000015432	vars2	90	75.980	Cynoglossus_semilaevis
ENSPMEG00000011123	vars2	66	82.394	ENSCVAG00000017765	vars2	98	82.394	Cyprinodon_variegatus
ENSPMEG00000011123	vars2	99	65.520	ENSDARG00000056717	vars2	100	65.520	Danio_rerio
ENSPMEG00000011123	vars2	80	49.656	ENSDORG00000008516	Vars2	93	49.656	Dipodomys_ordii
ENSPMEG00000011123	vars2	97	45.671	ENSETEG00000014844	VARS2	93	46.131	Echinops_telfairi
ENSPMEG00000011123	vars2	95	51.018	ENSEASG00005019997	VARS2	94	54.930	Equus_asinus_asinus
ENSPMEG00000011123	vars2	95	51.309	ENSECAG00000018202	VARS2	92	52.024	Equus_caballus
ENSPMEG00000011123	vars2	64	60.784	ENSEEUG00000012591	-	62	60.784	Erinaceus_europaeus
ENSPMEG00000011123	vars2	99	66.026	ENSELUG00000017824	vars2	99	66.026	Esox_lucius
ENSPMEG00000011123	vars2	97	50.714	ENSFCAG00000010531	VARS2	92	51.826	Felis_catus
ENSPMEG00000011123	vars2	95	51.503	ENSFDAG00000017216	VARS2	93	51.812	Fukomys_damarensis
ENSPMEG00000011123	vars2	94	79.683	ENSFHEG00000013932	vars2	98	79.683	Fundulus_heteroclitus
ENSPMEG00000011123	vars2	89	68.083	ENSGMOG00000018960	vars2	99	68.083	Gadus_morhua
ENSPMEG00000011123	vars2	93	89.697	ENSGAFG00000004737	vars2	100	89.697	Gambusia_affinis
ENSPMEG00000011123	vars2	94	75.050	ENSGACG00000001464	vars2	99	75.050	Gasterosteus_aculeatus
ENSPMEG00000011123	vars2	91	54.940	ENSGAGG00000011652	VARS2	98	54.940	Gopherus_agassizii
ENSPMEG00000011123	vars2	95	51.406	ENSGGOG00000014587	VARS2	92	52.433	Gorilla_gorilla
ENSPMEG00000011123	vars2	99	71.442	ENSHBUG00000002448	vars2	100	71.442	Haplochromis_burtoni
ENSPMEG00000011123	vars2	98	49.533	ENSHGLG00000012886	VARS2	90	51.126	Heterocephalus_glaber_female
ENSPMEG00000011123	vars2	98	49.439	ENSHGLG00100016535	VARS2	93	51.028	Heterocephalus_glaber_male
ENSPMEG00000011123	vars2	70	71.979	ENSHCOG00000017907	vars2	99	71.979	Hippocampus_comes
ENSPMEG00000011123	vars2	94	67.783	ENSIPUG00000015573	Vars2	99	65.613	Ictalurus_punctatus
ENSPMEG00000011123	vars2	96	50.821	ENSSTOG00000009924	VARS2	93	51.322	Ictidomys_tridecemlineatus
ENSPMEG00000011123	vars2	97	49.809	ENSJJAG00000011144	Vars2	92	51.087	Jaculus_jaculus
ENSPMEG00000011123	vars2	100	76.746	ENSKMAG00000001393	vars2	100	76.951	Kryptolebias_marmoratus
ENSPMEG00000011123	vars2	99	70.203	ENSLBEG00000011949	vars2	99	70.203	Labrus_bergylta
ENSPMEG00000011123	vars2	52	79.785	ENSLBEG00000005480	-	81	79.891	Labrus_bergylta
ENSPMEG00000011123	vars2	95	48.811	ENSLACG00000001576	-	96	49.610	Latimeria_chalumnae
ENSPMEG00000011123	vars2	96	51.009	ENSLAFG00000015183	VARS2	93	51.420	Loxodonta_africana
ENSPMEG00000011123	vars2	95	51.212	ENSMFAG00000042367	VARS2	92	52.234	Macaca_fascicularis
ENSPMEG00000011123	vars2	95	51.309	ENSMMUG00000018609	VARS2	92	52.334	Macaca_mulatta
ENSPMEG00000011123	vars2	95	51.309	ENSMNEG00000043163	VARS2	92	52.334	Macaca_nemestrina
ENSPMEG00000011123	vars2	95	51.309	ENSMLEG00000041728	VARS2	89	52.334	Mandrillus_leucophaeus
ENSPMEG00000011123	vars2	96	74.831	ENSMAMG00000020339	vars2	95	74.829	Mastacembelus_armatus
ENSPMEG00000011123	vars2	99	73.562	ENSMZEG00005017669	vars2	99	73.562	Maylandia_zebra
ENSPMEG00000011123	vars2	98	50.794	ENSMAUG00000018946	Vars2	92	52.522	Mesocricetus_auratus
ENSPMEG00000011123	vars2	82	54.828	ENSMICG00000005365	VARS2	92	57.762	Microcebus_murinus
ENSPMEG00000011123	vars2	95	47.531	ENSMOCG00000014607	Vars2	84	56.766	Microtus_ochrogaster
ENSPMEG00000011123	vars2	94	73.964	ENSMMOG00000012122	vars2	99	71.974	Mola_mola
ENSPMEG00000011123	vars2	95	49.763	ENSMODG00000015848	VARS2	91	51.575	Monodelphis_domestica
ENSPMEG00000011123	vars2	94	74.260	ENSMALG00000009217	vars2	100	74.260	Monopterus_albus
ENSPMEG00000011123	vars2	98	50.852	MGP_CAROLIEiJ_G0021529	Vars2	97	54.593	Mus_caroli
ENSPMEG00000011123	vars2	97	50.904	ENSMUSG00000038838	Vars2	93	55.676	Mus_musculus
ENSPMEG00000011123	vars2	95	51.503	MGP_PahariEiJ_G0020523	Vars2	93	55.495	Mus_pahari
ENSPMEG00000011123	vars2	97	50.999	MGP_SPRETEiJ_G0022436	Vars2	97	54.419	Mus_spretus
ENSPMEG00000011123	vars2	97	51.094	ENSMPUG00000011643	VARS2	92	52.532	Mustela_putorius_furo
ENSPMEG00000011123	vars2	94	51.622	ENSMLUG00000002356	VARS2	89	51.837	Myotis_lucifugus
ENSPMEG00000011123	vars2	96	47.592	ENSNGAG00000020607	Vars2	93	47.898	Nannospalax_galili
ENSPMEG00000011123	vars2	64	67.680	ENSNBRG00000001624	vars2	58	67.680	Neolamprologus_brichardi
ENSPMEG00000011123	vars2	94	51.131	ENSNLEG00000005625	VARS2	89	52.165	Nomascus_leucogenys
ENSPMEG00000011123	vars2	79	57.167	ENSMEUG00000014475	VARS2	89	57.167	Notamacropus_eugenii
ENSPMEG00000011123	vars2	86	57.955	ENSOPRG00000000682	VARS2	82	65.772	Ochotona_princeps
ENSPMEG00000011123	vars2	93	51.738	ENSODEG00000017965	VARS2	92	52.135	Octodon_degus
ENSPMEG00000011123	vars2	94	56.920	ENSONIG00000004734	vars2	100	56.934	Oreochromis_niloticus
ENSPMEG00000011123	vars2	72	42.545	ENSOANG00000000398	-	91	42.545	Ornithorhynchus_anatinus
ENSPMEG00000011123	vars2	98	46.967	ENSOCUG00000021496	VARS2	59	49.263	Oryctolagus_cuniculus
ENSPMEG00000011123	vars2	95	72.515	ENSORLG00000010632	vars2	99	70.534	Oryzias_latipes
ENSPMEG00000011123	vars2	99	69.613	ENSORLG00020018584	vars2	99	70.442	Oryzias_latipes_hni
ENSPMEG00000011123	vars2	94	73.069	ENSORLG00015010408	vars2	99	70.258	Oryzias_latipes_hsok
ENSPMEG00000011123	vars2	95	72.233	ENSOMEG00000008360	vars2	99	70.138	Oryzias_melastigma
ENSPMEG00000011123	vars2	95	51.404	ENSOGAG00000006087	VARS2	89	52.329	Otolemur_garnettii
ENSPMEG00000011123	vars2	95	51.066	ENSOARG00000010844	VARS2	91	51.677	Ovis_aries
ENSPMEG00000011123	vars2	95	51.406	ENSPPAG00000041141	VARS2	92	52.334	Pan_paniscus
ENSPMEG00000011123	vars2	97	50.904	ENSPPRG00000006751	VARS2	90	52.024	Panthera_pardus
ENSPMEG00000011123	vars2	97	50.809	ENSPTIG00000017799	VARS2	97	51.728	Panthera_tigris_altaica
ENSPMEG00000011123	vars2	95	51.406	ENSPTRG00000034497	VARS2	92	52.334	Pan_troglodytes
ENSPMEG00000011123	vars2	95	51.309	ENSPANG00000018481	VARS2	92	53.292	Papio_anubis
ENSPMEG00000011123	vars2	96	65.894	ENSPKIG00000011372	vars2	94	66.179	Paramormyrops_kingsleyae
ENSPMEG00000011123	vars2	58	62.047	ENSPSIG00000006206	VARS2	95	60.448	Pelodiscus_sinensis
ENSPMEG00000011123	vars2	97	69.656	ENSPMGG00000000465	vars2	94	70.907	Periophthalmus_magnuspinnatus
ENSPMEG00000011123	vars2	96	51.396	ENSPEMG00000014691	Vars2	93	52.118	Peromyscus_maniculatus_bairdii
ENSPMEG00000011123	vars2	98	49.953	ENSPCIG00000015040	VARS2	92	52.079	Phascolarctos_cinereus
ENSPMEG00000011123	vars2	98	98.958	ENSPFOG00000017616	vars2	97	98.958	Poecilia_formosa
ENSPMEG00000011123	vars2	100	99.258	ENSPLAG00000019778	vars2	100	99.258	Poecilia_latipinna
ENSPMEG00000011123	vars2	97	87.441	ENSPREG00000014998	vars2	99	87.441	Poecilia_reticulata
ENSPMEG00000011123	vars2	95	51.406	ENSPPYG00000016424	VARS2	92	52.433	Pongo_abelii
ENSPMEG00000011123	vars2	63	54.090	ENSPCAG00000006946	VARS2	61	54.090	Procavia_capensis
ENSPMEG00000011123	vars2	98	49.074	ENSPCOG00000014839	VARS2	91	50.781	Propithecus_coquereli
ENSPMEG00000011123	vars2	96	50.528	ENSPVAG00000004197	VARS2	93	51.028	Pteropus_vampyrus
ENSPMEG00000011123	vars2	87	80.054	ENSPNYG00000010314	vars2	100	80.054	Pundamilia_nyererei
ENSPMEG00000011123	vars2	96	67.083	ENSPNAG00000026793	vars2	98	66.015	Pygocentrus_nattereri
ENSPMEG00000011123	vars2	97	50.904	ENSRNOG00000000833	Vars2	92	52.079	Rattus_norvegicus
ENSPMEG00000011123	vars2	93	52.148	ENSRBIG00000032725	VARS2	91	52.248	Rhinopithecus_bieti
ENSPMEG00000011123	vars2	95	50.921	ENSRROG00000043847	VARS2	92	51.936	Rhinopithecus_roxellana
ENSPMEG00000011123	vars2	96	49.669	ENSSBOG00000033240	VARS2	90	50.629	Saimiri_boliviensis_boliviensis
ENSPMEG00000011123	vars2	98	50.880	ENSSHAG00000009307	VARS2	92	52.772	Sarcophilus_harrisii
ENSPMEG00000011123	vars2	97	65.550	ENSSFOG00015016187	vars2	94	66.341	Scleropages_formosus
ENSPMEG00000011123	vars2	99	73.865	ENSSMAG00000020842	vars2	99	77.352	Scophthalmus_maximus
ENSPMEG00000011123	vars2	95	77.973	ENSSDUG00000011598	vars2	99	76.340	Seriola_dumerili
ENSPMEG00000011123	vars2	92	77.800	ENSSLDG00000015492	vars2	99	74.054	Seriola_lalandi_dorsalis
ENSPMEG00000011123	vars2	79	59.342	ENSSPUG00000014700	VARS2	87	59.342	Sphenodon_punctatus
ENSPMEG00000011123	vars2	99	74.235	ENSSPAG00000004654	vars2	100	73.309	Stegastes_partitus
ENSPMEG00000011123	vars2	95	52.279	ENSSSCG00000001384	VARS2	93	54.832	Sus_scrofa
ENSPMEG00000011123	vars2	95	71.722	ENSTRUG00000005264	vars2	99	70.699	Takifugu_rubripes
ENSPMEG00000011123	vars2	97	67.871	ENSTNIG00000005916	vars2	98	67.007	Tetraodon_nigroviridis
ENSPMEG00000011123	vars2	80	55.233	ENSTTRG00000012243	VARS2	80	62.162	Tursiops_truncatus
ENSPMEG00000011123	vars2	97	50.856	ENSUAMG00000026124	VARS2	99	52.654	Ursus_americanus
ENSPMEG00000011123	vars2	97	50.904	ENSUMAG00000019894	VARS2	93	51.616	Ursus_maritimus
ENSPMEG00000011123	vars2	98	50.046	ENSVVUG00000010754	VARS2	87	52.234	Vulpes_vulpes
ENSPMEG00000011123	vars2	88	51.139	ENSXETG00000003036	vars2	98	51.139	Xenopus_tropicalis
ENSPMEG00000011123	vars2	97	90.181	ENSXCOG00000003455	vars2	99	90.181	Xiphophorus_couchianus
ENSPMEG00000011123	vars2	100	91.481	ENSXMAG00000013523	vars2	100	91.481	Xiphophorus_maculatus