EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000011220 (Gene tree)
Gene ID: 106915670
Gene Symbol: raver1
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 10553 bases
Position: chrKQ551152.1:755921-766473
Accession: 106915670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000009333	RRM_1	PF00076.22	1.1e-29	1	2
ENSPMEP00000009333	RRM_1	PF00076.22	1.1e-29	2	2
ENSPMEP00000027065	RRM_1	PF00076.22	1.3e-29	1	2
ENSPMEP00000027065	RRM_1	PF00076.22	1.3e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000000972	-	2112	-	ENSPMEP00000009333	703 (aa)	-	-
ENSPMET00000000936	-	4028	XM_014983417	ENSPMEP00000027065	735 (aa)	XP_014838903	-

Gene Model

Click here to download ENSPMEG00000011220's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000011220's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000011220	raver1	78	56.198	ENSPMEG00000000509	raver2	74	54.201

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000011220	raver1	92	51.565	ENSG00000161847	RAVER1	97	52.660	Homo_sapiens
ENSPMEG00000011220	raver1	98	82.197	ENSAPOG00000017267	raver1	92	81.831	Acanthochromis_polyacanthus
ENSPMEG00000011220	raver1	79	56.589	ENSAMEG00000011738	RAVER1	95	49.934	Ailuropoda_melanoleuca
ENSPMEG00000011220	raver1	98	83.287	ENSAOCG00000005128	raver1	97	82.900	Amphiprion_ocellaris
ENSPMEG00000011220	raver1	98	83.264	ENSAPEG00000010854	raver1	100	82.880	Amphiprion_percula
ENSPMEG00000011220	raver1	98	79.945	ENSATEG00000021004	raver1	100	79.620	Anabas_testudineus
ENSPMEG00000011220	raver1	61	58.537	ENSACAG00000008386	-	73	56.487	Anolis_carolinensis
ENSPMEG00000011220	raver1	68	67.892	ENSANAG00000028226	RAVER1	95	52.097	Aotus_nancymaae
ENSPMEG00000011220	raver1	100	80.461	ENSACLG00000018492	raver1	100	76.111	Astatotilapia_calliptera
ENSPMEG00000011220	raver1	97	64.891	ENSAMXG00000005132	raver1	100	63.648	Astyanax_mexicanus
ENSPMEG00000011220	raver1	64	80.000	ENSBTAG00000015721	RAVER1	100	50.624	Bos_taurus
ENSPMEG00000011220	raver1	68	67.734	ENSCJAG00000005671	RAVER1	95	52.174	Callithrix_jacchus
ENSPMEG00000011220	raver1	94	50.674	ENSCAFG00000017861	RAVER1	98	52.394	Canis_familiaris
ENSPMEG00000011220	raver1	94	50.674	ENSCAFG00020024449	RAVER1	100	52.394	Canis_lupus_dingo
ENSPMEG00000011220	raver1	68	67.241	ENSCHIG00000006718	RAVER1	97	51.907	Capra_hircus
ENSPMEG00000011220	raver1	62	69.252	ENSTSYG00000027107	RAVER1	72	68.785	Carlito_syrichta
ENSPMEG00000011220	raver1	61	68.362	ENSCAPG00000002269	RAVER1	100	51.170	Cavia_aperea
ENSPMEG00000011220	raver1	66	68.462	ENSCPOG00000001008	RAVER1	96	52.138	Cavia_porcellus
ENSPMEG00000011220	raver1	68	67.980	ENSCCAG00000031723	RAVER1	95	52.381	Cebus_capucinus
ENSPMEG00000011220	raver1	92	49.185	ENSCATG00000043863	RAVER1	95	52.524	Cercocebus_atys
ENSPMEG00000011220	raver1	67	68.020	ENSCLAG00000009336	RAVER1	96	51.374	Chinchilla_lanigera
ENSPMEG00000011220	raver1	69	67.640	ENSCSAG00000007317	RAVER1	82	52.575	Chlorocebus_sabaeus
ENSPMEG00000011220	raver1	92	51.178	ENSCPBG00000005349	-	98	51.383	Chrysemys_picta_bellii
ENSPMEG00000011220	raver1	68	67.980	ENSCANG00000008337	RAVER1	95	52.660	Colobus_angolensis_palliatus
ENSPMEG00000011220	raver1	55	67.259	ENSCGRG00001013260	-	90	63.592	Cricetulus_griseus_chok1gshd
ENSPMEG00000011220	raver1	55	67.259	ENSCGRG00000015138	-	90	63.592	Cricetulus_griseus_crigri
ENSPMEG00000011220	raver1	98	73.352	ENSCSEG00000021092	raver1	100	73.009	Cynoglossus_semilaevis
ENSPMEG00000011220	raver1	100	85.598	ENSCVAG00000013971	raver1	100	85.598	Cyprinodon_variegatus
ENSPMEG00000011220	raver1	98	66.575	ENSDARG00000052617	raver1	100	64.722	Danio_rerio
ENSPMEG00000011220	raver1	58	62.500	ENSDNOG00000035742	-	59	59.831	Dasypus_novemcinctus
ENSPMEG00000011220	raver1	64	64.474	ENSDORG00000010106	-	96	48.840	Dipodomys_ordii
ENSPMEG00000011220	raver1	55	67.866	ENSEASG00005010544	-	70	67.436	Equus_asinus_asinus
ENSPMEG00000011220	raver1	69	66.910	ENSECAG00000024966	RAVER1	95	51.552	Equus_caballus
ENSPMEG00000011220	raver1	98	70.759	ENSELUG00000023287	raver1	100	70.461	Esox_lucius
ENSPMEG00000011220	raver1	69	66.910	ENSFCAG00000009435	RAVER1	95	51.544	Felis_catus
ENSPMEG00000011220	raver1	90	49.660	ENSFDAG00000015113	RAVER1	96	52.049	Fukomys_damarensis
ENSPMEG00000011220	raver1	93	68.220	ENSGMOG00000003649	raver1	98	68.927	Gadus_morhua
ENSPMEG00000011220	raver1	64	38.716	ENSGALG00000050608	-	50	38.095	Gallus_gallus
ENSPMEG00000011220	raver1	100	92.789	ENSGAFG00000015944	raver1	100	92.789	Gambusia_affinis
ENSPMEG00000011220	raver1	85	79.959	ENSGACG00000013818	raver1	100	70.771	Gasterosteus_aculeatus
ENSPMEG00000011220	raver1	80	68.280	ENSGAGG00000011748	-	99	67.010	Gopherus_agassizii
ENSPMEG00000011220	raver1	92	51.565	ENSGGOG00000006015	RAVER1	95	52.660	Gorilla_gorilla
ENSPMEG00000011220	raver1	99	80.328	ENSHBUG00000021210	raver1	100	76.389	Haplochromis_burtoni
ENSPMEG00000011220	raver1	90	51.667	ENSHGLG00000015460	RAVER1	96	52.394	Heterocephalus_glaber_female
ENSPMEG00000011220	raver1	90	51.667	ENSHGLG00100000812	RAVER1	96	52.394	Heterocephalus_glaber_male
ENSPMEG00000011220	raver1	100	72.087	ENSHCOG00000000449	raver1	98	73.171	Hippocampus_comes
ENSPMEG00000011220	raver1	98	66.575	ENSIPUG00000013153	raver1	100	67.164	Ictalurus_punctatus
ENSPMEG00000011220	raver1	93	50.809	ENSSTOG00000003241	RAVER1	98	52.362	Ictidomys_tridecemlineatus
ENSPMEG00000011220	raver1	94	50.197	ENSJJAG00000018219	-	100	51.262	Jaculus_jaculus
ENSPMEG00000011220	raver1	100	78.155	ENSKMAG00000017355	raver1	100	78.155	Kryptolebias_marmoratus
ENSPMEG00000011220	raver1	93	79.148	ENSLBEG00000008268	raver1	96	79.148	Labrus_bergylta
ENSPMEG00000011220	raver1	85	49.640	ENSLACG00000005809	-	99	50.432	Latimeria_chalumnae
ENSPMEG00000011220	raver1	92	62.244	ENSLOCG00000007500	raver1	100	60.406	Lepisosteus_oculatus
ENSPMEG00000011220	raver1	91	52.687	ENSLAFG00000003664	-	100	51.780	Loxodonta_africana
ENSPMEG00000011220	raver1	93	51.832	ENSMFAG00000037977	RAVER1	95	52.710	Macaca_fascicularis
ENSPMEG00000011220	raver1	69	67.640	ENSMMUG00000014897	RAVER1	95	52.439	Macaca_mulatta
ENSPMEG00000011220	raver1	93	49.123	ENSMNEG00000028390	RAVER1	95	52.439	Macaca_nemestrina
ENSPMEG00000011220	raver1	92	49.457	ENSMLEG00000041959	RAVER1	95	52.660	Mandrillus_leucophaeus
ENSPMEG00000011220	raver1	98	79.806	ENSMAMG00000012059	raver1	100	79.348	Mastacembelus_armatus
ENSPMEG00000011220	raver1	100	80.461	ENSMZEG00005019002	raver1	100	80.461	Maylandia_zebra
ENSPMEG00000011220	raver1	91	50.833	ENSMAUG00000017948	-	90	63.527	Mesocricetus_auratus
ENSPMEG00000011220	raver1	92	52.254	ENSMICG00000010326	RAVER1	97	53.475	Microcebus_murinus
ENSPMEG00000011220	raver1	67	67.259	ENSMOCG00000015553	-	100	51.523	Microtus_ochrogaster
ENSPMEG00000011220	raver1	98	80.083	ENSMMOG00000012093	raver1	100	79.620	Mola_mola
ENSPMEG00000011220	raver1	90	51.301	ENSMODG00000005584	-	87	52.041	Monodelphis_domestica
ENSPMEG00000011220	raver1	100	75.848	ENSMALG00000016569	raver1	100	77.612	Monopterus_albus
ENSPMEG00000011220	raver1	94	49.804	MGP_CAROLIEiJ_G0031860	-	100	51.184	Mus_caroli
ENSPMEG00000011220	raver1	91	50.204	ENSMUSG00000010205	Raver1	99	51.467	Mus_musculus
ENSPMEG00000011220	raver1	91	49.072	MGP_PahariEiJ_G0014726	-	99	50.591	Mus_pahari
ENSPMEG00000011220	raver1	91	50.068	MGP_SPRETEiJ_G0032984	-	99	51.333	Mus_spretus
ENSPMEG00000011220	raver1	77	60.000	ENSMPUG00000006712	RAVER1	94	52.000	Mustela_putorius_furo
ENSPMEG00000011220	raver1	93	50.546	ENSMLUG00000012328	RAVER1	98	52.982	Myotis_lucifugus
ENSPMEG00000011220	raver1	67	66.329	ENSNGAG00000001260	-	69	64.548	Nannospalax_galili
ENSPMEG00000011220	raver1	100	72.320	ENSNBRG00000010139	raver1	100	71.913	Neolamprologus_brichardi
ENSPMEG00000011220	raver1	70	65.647	ENSNLEG00000012181	RAVER1	95	52.524	Nomascus_leucogenys
ENSPMEG00000011220	raver1	77	59.825	ENSMEUG00000003281	-	86	59.825	Notamacropus_eugenii
ENSPMEG00000011220	raver1	62	80.000	ENSODEG00000016260	RAVER1	96	51.166	Octodon_degus
ENSPMEG00000011220	raver1	92	78.770	ENSONIG00000001559	raver1	99	80.323	Oreochromis_niloticus
ENSPMEG00000011220	raver1	71	73.214	ENSOCUG00000020918	RAVER1	97	51.179	Oryctolagus_cuniculus
ENSPMEG00000011220	raver1	100	76.902	ENSORLG00000005458	raver1	100	76.902	Oryzias_latipes
ENSPMEG00000011220	raver1	100	77.038	ENSORLG00020004392	raver1	100	77.038	Oryzias_latipes_hni
ENSPMEG00000011220	raver1	100	77.582	ENSORLG00015017222	raver1	100	77.582	Oryzias_latipes_hsok
ENSPMEG00000011220	raver1	100	72.385	ENSOMEG00000023956	raver1	100	72.385	Oryzias_melastigma
ENSPMEG00000011220	raver1	92	50.880	ENSOGAG00000011071	RAVER1	95	51.635	Otolemur_garnettii
ENSPMEG00000011220	raver1	64	80.000	ENSOARG00000015886	RAVER1	95	49.120	Ovis_aries
ENSPMEG00000011220	raver1	92	51.565	ENSPPAG00000002611	RAVER1	95	52.660	Pan_paniscus
ENSPMEG00000011220	raver1	93	50.000	ENSPPRG00000009912	RAVER1	95	51.409	Panthera_pardus
ENSPMEG00000011220	raver1	92	51.565	ENSPTRG00000010466	RAVER1	95	52.660	Pan_troglodytes
ENSPMEG00000011220	raver1	92	49.120	ENSPANG00000004122	RAVER1	95	52.452	Papio_anubis
ENSPMEG00000011220	raver1	66	58.483	ENSPEMG00000016411	-	99	63.592	Peromyscus_maniculatus_bairdii
ENSPMEG00000011220	raver1	93	53.276	ENSPCIG00000018695	-	100	51.206	Phascolarctos_cinereus
ENSPMEG00000011220	raver1	100	96.386	ENSPFOG00000007016	raver1	100	96.386	Poecilia_formosa
ENSPMEG00000011220	raver1	95	96.705	ENSPLAG00000020793	raver1	99	96.705	Poecilia_latipinna
ENSPMEG00000011220	raver1	100	89.796	ENSPREG00000006864	raver1	100	89.796	Poecilia_reticulata
ENSPMEG00000011220	raver1	68	67.734	ENSPPYG00000010514	RAVER1	81	52.381	Pongo_abelii
ENSPMEG00000011220	raver1	79	58.367	ENSPCOG00000026605	RAVER1	95	51.687	Propithecus_coquereli
ENSPMEG00000011220	raver1	62	80.000	ENSPVAG00000003689	RAVER1	96	52.646	Pteropus_vampyrus
ENSPMEG00000011220	raver1	100	78.401	ENSPNYG00000013284	raver1	100	78.401	Pundamilia_nyererei
ENSPMEG00000011220	raver1	98	67.213	ENSPNAG00000015476	raver1	100	66.443	Pygocentrus_nattereri
ENSPMEG00000011220	raver1	91	51.150	ENSRNOG00000020710	Raver1	99	51.862	Rattus_norvegicus
ENSPMEG00000011220	raver1	92	53.173	ENSRBIG00000034702	RAVER1	95	53.436	Rhinopithecus_bieti
ENSPMEG00000011220	raver1	92	52.949	ENSRROG00000031186	RAVER1	95	53.296	Rhinopithecus_roxellana
ENSPMEG00000011220	raver1	92	51.724	ENSSBOG00000023423	RAVER1	95	53.305	Saimiri_boliviensis_boliviensis
ENSPMEG00000011220	raver1	85	53.282	ENSSHAG00000008181	-	90	53.621	Sarcophilus_harrisii
ENSPMEG00000011220	raver1	98	80.663	ENSSMAG00000004546	raver1	100	80.190	Scophthalmus_maximus
ENSPMEG00000011220	raver1	98	83.679	ENSSDUG00000021063	raver1	100	83.152	Seriola_dumerili
ENSPMEG00000011220	raver1	98	83.679	ENSSLDG00000014505	raver1	100	83.152	Seriola_lalandi_dorsalis
ENSPMEG00000011220	raver1	98	83.956	ENSSPAG00000000688	raver1	100	83.560	Stegastes_partitus
ENSPMEG00000011220	raver1	91	52.535	ENSSSCG00000013650	-	96	53.561	Sus_scrofa
ENSPMEG00000011220	raver1	98	74.586	ENSTRUG00000025641	raver1	100	74.220	Takifugu_rubripes
ENSPMEG00000011220	raver1	68	66.995	ENSTTRG00000009552	RAVER1	97	51.639	Tursiops_truncatus
ENSPMEG00000011220	raver1	69	67.153	ENSUAMG00000020385	RAVER1	95	51.552	Ursus_americanus
ENSPMEG00000011220	raver1	94	50.674	ENSVVUG00000028976	RAVER1	98	52.596	Vulpes_vulpes
ENSPMEG00000011220	raver1	90	51.012	ENSXETG00000011622	raver1	94	49.711	Xenopus_tropicalis
ENSPMEG00000011220	raver1	100	94.014	ENSXCOG00000016368	raver1	100	94.014	Xiphophorus_couchianus
ENSPMEG00000011220	raver1	100	93.741	ENSXMAG00000000217	raver1	100	93.741	Xiphophorus_maculatus