EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000011603 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 4844 bases
Position: chrKQ551662.1:217699-222542
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000009717	RRM_1	PF00076.22	2.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000000319	-	375	-	ENSPMEP00000009717	124 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000011603's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000011603's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000011603	-	68	39.506	ENSPMEG00000015619	elavl4	57	39.506
ENSPMEG00000011603	-	68	44.444	ENSPMEG00000002868	elavl1a	65	44.444
ENSPMEG00000011603	-	68	40.741	ENSPMEG00000021929	ELAVL2	60	40.741
ENSPMEG00000011603	-	67	47.436	ENSPMEG00000000283	ELAVL1	70	46.914
ENSPMEG00000011603	-	86	40.698	ENSPMEG00000010156	elavl3	69	40.698
ENSPMEG00000011603	-	58	39.189	ENSPMEG00000013853	-	60	39.189

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000011603	-	96	99.160	ENSAMXG00000034719	-	96	99.160	Astyanax_mexicanus
ENSPMEG00000011603	-	73	91.111	ENSBTAG00000051439	-	57	91.111	Bos_taurus
ENSPMEG00000011603	-	96	78.151	ENSCHIG00000009150	-	75	89.130	Capra_hircus
ENSPMEG00000011603	-	74	93.478	ENSCVAG00000018670	si:dkey-205h23.2	52	84.167	Cyprinodon_variegatus
ENSPMEG00000011603	-	98	77.049	ENSECAG00000036983	-	92	75.410	Equus_caballus
ENSPMEG00000011603	-	73	95.556	ENSGALG00000048972	-	83	95.556	Gallus_gallus
ENSPMEG00000011603	-	77	57.292	ENSNBRG00000010123	-	75	62.500	Neolamprologus_brichardi
ENSPMEG00000011603	-	56	92.754	ENSOANG00000031583	-	100	92.754	Ornithorhynchus_anatinus
ENSPMEG00000011603	-	77	89.474	ENSPTIG00000005413	-	70	89.130	Panthera_tigris_altaica
ENSPMEG00000011603	-	98	99.174	ENSPKIG00000024667	-	98	99.174	Paramormyrops_kingsleyae
ENSPMEG00000011603	-	74	93.478	ENSPLAG00000000224	-	75	93.478	Poecilia_latipinna
ENSPMEG00000011603	-	74	93.478	ENSPLAG00000015969	-	75	93.478	Poecilia_latipinna
ENSPMEG00000011603	-	100	100.000	ENSPLAG00000013524	-	100	100.000	Poecilia_latipinna
ENSPMEG00000011603	-	55	72.059	ENSPNYG00000011502	-	50	83.019	Pundamilia_nyererei
ENSPMEG00000011603	-	74	93.478	ENSSLDG00000015995	-	50	84.167	Seriola_lalandi_dorsalis
ENSPMEG00000011603	-	77	89.474	ENSUAMG00000025729	-	75	89.130	Ursus_americanus
ENSPMEG00000011603	-	77	89.474	ENSUMAG00000008820	-	75	89.130	Ursus_maritimus
ENSPMEG00000011603	-	98	76.230	ENSVVUG00000018262	-	92	75.410	Vulpes_vulpes
ENSPMEG00000011603	-	72	91.011	ENSVVUG00000003252	-	77	91.011	Vulpes_vulpes