EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000011676 (Gene tree)
Gene ID: 106928726
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 11905 bases
Position: chrKQ552033.1:189999-201903
Accession: 106928726
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000009806	RNase_Zc3h12a	PF11977.8	4.3e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000000187	-	5926	XM_015005174	ENSPMEP00000009806	892 (aa)	XP_014860660	UPI00072DCDE2

Gene Model

Click here to download ENSPMEG00000011676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000011676's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000011676	-	50	61.438	ENSPMEG00000006624	-	85	47.932

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000011676	-	100	58.117	ENSAPOG00000001632	-	99	77.411	Acanthochromis_polyacanthus
ENSPMEG00000011676	-	51	61.618	ENSAPOG00000015355	-	68	51.242	Acanthochromis_polyacanthus
ENSPMEG00000011676	-	58	63.676	ENSACIG00000001362	-	79	52.903	Amphilophus_citrinellus
ENSPMEG00000011676	-	99	43.496	ENSAOCG00000003866	-	86	78.696	Amphiprion_ocellaris
ENSPMEG00000011676	-	99	43.229	ENSAPEG00000005727	-	94	65.789	Amphiprion_percula
ENSPMEG00000011676	-	71	44.214	ENSAPEG00000018582	-	98	47.935	Amphiprion_percula
ENSPMEG00000011676	-	99	42.436	ENSATEG00000004134	-	86	63.636	Anabas_testudineus
ENSPMEG00000011676	-	100	59.655	ENSATEG00000002260	-	93	82.759	Anabas_testudineus
ENSPMEG00000011676	-	100	62.703	ENSACLG00000018493	-	100	62.595	Astatotilapia_calliptera
ENSPMEG00000011676	-	99	41.980	ENSACLG00000027924	-	86	63.636	Astatotilapia_calliptera
ENSPMEG00000011676	-	99	55.471	ENSCSEG00000008542	-	99	54.821	Cynoglossus_semilaevis
ENSPMEG00000011676	-	50	61.538	ENSCVAG00000002328	-	84	46.914	Cyprinodon_variegatus
ENSPMEG00000011676	-	84	53.325	ENSELUG00000005470	-	99	50.947	Esox_lucius
ENSPMEG00000011676	-	50	60.470	ENSFHEG00000021225	-	83	67.974	Fundulus_heteroclitus
ENSPMEG00000011676	-	71	50.233	ENSGMOG00000017975	-	99	50.078	Gadus_morhua
ENSPMEG00000011676	-	99	42.170	ENSGAFG00000005290	-	99	43.648	Gambusia_affinis
ENSPMEG00000011676	-	71	57.031	ENSGACG00000001339	-	99	56.563	Gasterosteus_aculeatus
ENSPMEG00000011676	-	71	44.461	ENSGACG00000014201	-	99	45.181	Gasterosteus_aculeatus
ENSPMEG00000011676	-	99	41.798	ENSHBUG00000006831	-	86	63.636	Haplochromis_burtoni
ENSPMEG00000011676	-	83	47.837	ENSHCOG00000008878	-	82	47.513	Hippocampus_comes
ENSPMEG00000011676	-	66	53.783	ENSKMAG00000011694	-	99	44.387	Kryptolebias_marmoratus
ENSPMEG00000011676	-	83	47.590	ENSLBEG00000003547	-	83	48.344	Labrus_bergylta
ENSPMEG00000011676	-	83	47.590	ENSLBEG00000012554	-	84	70.667	Labrus_bergylta
ENSPMEG00000011676	-	100	60.626	ENSLBEG00000012710	-	100	60.949	Labrus_bergylta
ENSPMEG00000011676	-	100	61.663	ENSMAMG00000020372	-	100	60.583	Mastacembelus_armatus
ENSPMEG00000011676	-	71	64.583	ENSMAMG00000021794	-	94	69.935	Mastacembelus_armatus
ENSPMEG00000011676	-	99	42.079	ENSMZEG00005007718	-	86	63.636	Maylandia_zebra
ENSPMEG00000011676	-	100	62.703	ENSMZEG00005019137	-	90	81.579	Maylandia_zebra
ENSPMEG00000011676	-	100	56.000	ENSMMOG00000019526	-	94	55.124	Mola_mola
ENSPMEG00000011676	-	84	47.613	ENSMMOG00000005728	-	86	67.347	Mola_mola
ENSPMEG00000011676	-	53	66.667	ENSMALG00000010501	-	86	66.667	Monopterus_albus
ENSPMEG00000011676	-	99	42.376	ENSNBRG00000006978	-	86	63.636	Neolamprologus_brichardi
ENSPMEG00000011676	-	100	62.121	ENSNBRG00000012175	-	90	81.579	Neolamprologus_brichardi
ENSPMEG00000011676	-	51	60.788	ENSONIG00000012268	-	86	63.636	Oreochromis_niloticus
ENSPMEG00000011676	-	88	58.537	ENSORLG00000029243	-	92	58.537	Oryzias_latipes
ENSPMEG00000011676	-	87	58.537	ENSORLG00020017005	-	89	58.537	Oryzias_latipes_hni
ENSPMEG00000011676	-	87	60.976	ENSORLG00015015211	-	89	60.976	Oryzias_latipes_hsok
ENSPMEG00000011676	-	80	51.753	ENSOMEG00000006666	-	83	47.914	Oryzias_melastigma
ENSPMEG00000011676	-	57	66.170	ENSPMGG00000020126	-	55	66.667	Periophthalmus_magnuspinnatus
ENSPMEG00000011676	-	50	59.915	ENSPLAG00000009867	-	99	44.139	Poecilia_latipinna
ENSPMEG00000011676	-	52	59.751	ENSPREG00000010838	-	85	48.297	Poecilia_reticulata
ENSPMEG00000011676	-	98	96.145	ENSPREG00000001607	-	99	96.145	Poecilia_reticulata
ENSPMEG00000011676	-	99	61.604	ENSSMAG00000007258	-	99	61.925	Scophthalmus_maximus
ENSPMEG00000011676	-	83	47.497	ENSSMAG00000007545	-	82	47.311	Scophthalmus_maximus
ENSPMEG00000011676	-	100	59.806	ENSSDUG00000013237	-	91	78.667	Seriola_dumerili
ENSPMEG00000011676	-	99	41.399	ENSSDUG00000021864	-	86	66.667	Seriola_dumerili
ENSPMEG00000011676	-	100	63.412	ENSSLDG00000004886	-	100	63.627	Seriola_lalandi_dorsalis
ENSPMEG00000011676	-	86	66.667	ENSSLDG00000012268	-	86	66.667	Seriola_lalandi_dorsalis
ENSPMEG00000011676	-	100	65.733	ENSSPAG00000001850	-	100	65.841	Stegastes_partitus
ENSPMEG00000011676	-	99	41.625	ENSTRUG00000022519	-	83	45.844	Takifugu_rubripes
ENSPMEG00000011676	-	73	45.950	ENSTNIG00000014519	-	90	74.790	Tetraodon_nigroviridis
ENSPMEG00000011676	-	50	61.233	ENSXMAG00000027171	-	99	43.813	Xiphophorus_maculatus
ENSPMEG00000011676	-	100	92.333	ENSXMAG00000014715	-	97	98.198	Xiphophorus_maculatus