EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000011798 (Gene tree)
Gene ID: 106911081
Gene Symbol: xrn2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 17225 bases
Position: chrKQ554762.1:11218-28442
Accession: 106911081
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000009913	XRN_N	PF03159.18	5.5e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000000003	-	4674	XM_014977812	ENSPMEP00000009913	913 (aa)	XP_014833298	-

Gene Model

Click here to download ENSPMEG00000011798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000011798's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000011798	xrn2	99	69.206	ENSG00000088930	XRN2	94	68.335	Homo_sapiens
ENSPMEG00000011798	xrn2	96	85.471	ENSAPOG00000009818	xrn2	94	83.874	Acanthochromis_polyacanthus
ENSPMEG00000011798	xrn2	99	69.097	ENSAMEG00000012581	XRN2	94	68.226	Ailuropoda_melanoleuca
ENSPMEG00000011798	xrn2	90	79.976	ENSACIG00000015047	xrn2	85	85.563	Amphilophus_citrinellus
ENSPMEG00000011798	xrn2	96	86.039	ENSAOCG00000023632	xrn2	94	84.416	Amphiprion_ocellaris
ENSPMEG00000011798	xrn2	96	86.152	ENSAPEG00000014871	xrn2	94	84.740	Amphiprion_percula
ENSPMEG00000011798	xrn2	96	84.790	ENSATEG00000001273	xrn2	94	84.053	Anabas_testudineus
ENSPMEG00000011798	xrn2	97	70.191	ENSAPLG00000013869	XRN2	97	68.490	Anas_platyrhynchos
ENSPMEG00000011798	xrn2	99	70.486	ENSACAG00000005565	XRN2	94	70.033	Anolis_carolinensis
ENSPMEG00000011798	xrn2	99	69.097	ENSANAG00000020126	XRN2	94	68.226	Aotus_nancymaae
ENSPMEG00000011798	xrn2	89	84.540	ENSACLG00000010522	xrn2	91	84.540	Astatotilapia_calliptera
ENSPMEG00000011798	xrn2	99	77.730	ENSAMXG00000018301	xrn2	94	77.489	Astyanax_mexicanus
ENSPMEG00000011798	xrn2	99	68.335	ENSBTAG00000011304	XRN2	100	67.465	Bos_taurus
ENSPMEG00000011798	xrn2	85	53.300	WBGene00006964	xrn-2	92	49.567	Caenorhabditis_elegans
ENSPMEG00000011798	xrn2	99	68.988	ENSCJAG00000005611	XRN2	94	68.118	Callithrix_jacchus
ENSPMEG00000011798	xrn2	99	69.206	ENSCAFG00000005185	XRN2	95	68.335	Canis_familiaris
ENSPMEG00000011798	xrn2	99	69.206	ENSCAFG00020027479	XRN2	94	68.335	Canis_lupus_dingo
ENSPMEG00000011798	xrn2	99	68.444	ENSCHIG00000006921	XRN2	94	67.573	Capra_hircus
ENSPMEG00000011798	xrn2	99	68.506	ENSTSYG00000008315	XRN2	94	67.641	Carlito_syrichta
ENSPMEG00000011798	xrn2	99	59.524	ENSCAPG00000010773	XRN2	96	58.460	Cavia_aperea
ENSPMEG00000011798	xrn2	99	69.750	ENSCPOG00000009407	XRN2	94	68.879	Cavia_porcellus
ENSPMEG00000011798	xrn2	99	69.206	ENSCATG00000040350	XRN2	94	68.335	Cercocebus_atys
ENSPMEG00000011798	xrn2	99	69.423	ENSCLAG00000013419	XRN2	94	68.553	Chinchilla_lanigera
ENSPMEG00000011798	xrn2	99	69.206	ENSCSAG00000011094	XRN2	94	68.335	Chlorocebus_sabaeus
ENSPMEG00000011798	xrn2	62	88.623	ENSCHOG00000013404	XRN2	61	88.623	Choloepus_hoffmanni
ENSPMEG00000011798	xrn2	96	70.740	ENSCPBG00000023533	XRN2	97	69.164	Chrysemys_picta_bellii
ENSPMEG00000011798	xrn2	84	58.028	ENSCING00000022336	-	94	59.292	Ciona_intestinalis
ENSPMEG00000011798	xrn2	79	69.415	ENSCSAVG00000011217	-	85	70.637	Ciona_savignyi
ENSPMEG00000011798	xrn2	99	69.206	ENSCANG00000040240	XRN2	94	68.335	Colobus_angolensis_palliatus
ENSPMEG00000011798	xrn2	97	70.358	ENSCGRG00001010676	Xrn2	94	69.888	Cricetulus_griseus_chok1gshd
ENSPMEG00000011798	xrn2	99	68.988	ENSCGRG00000006378	Xrn2	97	68.525	Cricetulus_griseus_crigri
ENSPMEG00000011798	xrn2	51	78.112	ENSCSEG00000005628	xrn2	89	77.897	Cynoglossus_semilaevis
ENSPMEG00000011798	xrn2	91	86.842	ENSCVAG00000018999	xrn2	88	93.603	Cyprinodon_variegatus
ENSPMEG00000011798	xrn2	99	75.054	ENSDARG00000101900	xrn2	86	84.222	Danio_rerio
ENSPMEG00000011798	xrn2	99	69.314	ENSDNOG00000001895	XRN2	94	68.444	Dasypus_novemcinctus
ENSPMEG00000011798	xrn2	99	67.791	ENSDORG00000005434	Xrn2	94	67.137	Dipodomys_ordii
ENSPMEG00000011798	xrn2	99	59.760	ENSETEG00000001740	XRN2	86	79.552	Echinops_telfairi
ENSPMEG00000011798	xrn2	83	68.182	ENSEBUG00000016136	xrn2	96	68.182	Eptatretus_burgeri
ENSPMEG00000011798	xrn2	99	69.641	ENSEASG00005002484	XRN2	94	68.913	Equus_asinus_asinus
ENSPMEG00000011798	xrn2	99	69.880	ENSECAG00000018988	XRN2	94	68.387	Equus_caballus
ENSPMEG00000011798	xrn2	68	65.858	ENSEEUG00000009265	XRN2	64	65.858	Erinaceus_europaeus
ENSPMEG00000011798	xrn2	99	77.634	ENSELUG00000000552	xrn2	95	77.152	Esox_lucius
ENSPMEG00000011798	xrn2	99	68.988	ENSFCAG00000007970	XRN2	94	68.118	Felis_catus
ENSPMEG00000011798	xrn2	97	69.989	ENSFALG00000004508	XRN2	94	68.113	Ficedula_albicollis
ENSPMEG00000011798	xrn2	99	69.314	ENSFDAG00000016311	XRN2	94	68.444	Fukomys_damarensis
ENSPMEG00000011798	xrn2	51	85.043	ENSFHEG00000013039	xrn2	87	85.043	Fundulus_heteroclitus
ENSPMEG00000011798	xrn2	85	79.177	ENSGMOG00000013436	xrn2	93	79.177	Gadus_morhua
ENSPMEG00000011798	xrn2	99	68.627	ENSGALG00000008372	XRN2	94	67.943	Gallus_gallus
ENSPMEG00000011798	xrn2	89	98.034	ENSGAFG00000014284	xrn2	93	98.034	Gambusia_affinis
ENSPMEG00000011798	xrn2	86	80.843	ENSGACG00000011870	xrn2	93	80.715	Gasterosteus_aculeatus
ENSPMEG00000011798	xrn2	96	70.516	ENSGAGG00000004884	XRN2	94	68.838	Gopherus_agassizii
ENSPMEG00000011798	xrn2	99	69.206	ENSGGOG00000013738	XRN2	94	68.335	Gorilla_gorilla
ENSPMEG00000011798	xrn2	51	86.111	ENSHBUG00000005077	xrn2	84	86.111	Haplochromis_burtoni
ENSPMEG00000011798	xrn2	99	68.335	ENSHGLG00000014831	XRN2	94	67.465	Heterocephalus_glaber_female
ENSPMEG00000011798	xrn2	99	68.335	ENSHGLG00100013130	XRN2	94	67.465	Heterocephalus_glaber_male
ENSPMEG00000011798	xrn2	99	78.947	ENSHCOG00000011994	xrn2	94	79.355	Hippocampus_comes
ENSPMEG00000011798	xrn2	99	76.534	ENSIPUG00000006639	xrn2	94	76.185	Ictalurus_punctatus
ENSPMEG00000011798	xrn2	99	69.532	ENSSTOG00000000589	XRN2	94	68.662	Ictidomys_tridecemlineatus
ENSPMEG00000011798	xrn2	99	69.532	ENSJJAG00000022128	Xrn2	94	68.743	Jaculus_jaculus
ENSPMEG00000011798	xrn2	51	87.580	ENSLBEG00000010041	xrn2	89	87.580	Labrus_bergylta
ENSPMEG00000011798	xrn2	95	71.638	ENSLACG00000008307	XRN2	93	75.933	Latimeria_chalumnae
ENSPMEG00000011798	xrn2	99	71.164	ENSLOCG00000016874	xrn2	93	80.353	Lepisosteus_oculatus
ENSPMEG00000011798	xrn2	99	69.641	ENSLAFG00000014624	XRN2	94	68.770	Loxodonta_africana
ENSPMEG00000011798	xrn2	99	69.206	ENSMFAG00000038122	XRN2	94	68.335	Macaca_fascicularis
ENSPMEG00000011798	xrn2	99	69.206	ENSMMUG00000011405	XRN2	94	68.335	Macaca_mulatta
ENSPMEG00000011798	xrn2	99	69.097	ENSMNEG00000040626	XRN2	94	68.226	Macaca_nemestrina
ENSPMEG00000011798	xrn2	99	69.097	ENSMLEG00000041897	XRN2	94	68.226	Mandrillus_leucophaeus
ENSPMEG00000011798	xrn2	95	85.450	ENSMAMG00000008633	xrn2	93	84.496	Mastacembelus_armatus
ENSPMEG00000011798	xrn2	89	86.748	ENSMZEG00005022362	xrn2	91	86.748	Maylandia_zebra
ENSPMEG00000011798	xrn2	99	68.261	ENSMGAG00000003196	XRN2	94	67.576	Meleagris_gallopavo
ENSPMEG00000011798	xrn2	99	69.859	ENSMAUG00000021842	Xrn2	94	68.988	Mesocricetus_auratus
ENSPMEG00000011798	xrn2	99	68.770	ENSMICG00000008126	XRN2	94	68.118	Microcebus_murinus
ENSPMEG00000011798	xrn2	99	69.314	ENSMOCG00000012588	Xrn2	94	68.743	Microtus_ochrogaster
ENSPMEG00000011798	xrn2	90	83.453	ENSMMOG00000017576	xrn2	91	83.453	Mola_mola
ENSPMEG00000011798	xrn2	99	69.138	ENSMODG00000006163	XRN2	94	68.743	Monodelphis_domestica
ENSPMEG00000011798	xrn2	90	84.885	ENSMALG00000011355	xrn2	93	84.885	Monopterus_albus
ENSPMEG00000011798	xrn2	99	68.988	MGP_CAROLIEiJ_G0024400	Xrn2	94	68.450	Mus_caroli
ENSPMEG00000011798	xrn2	99	69.097	ENSMUSG00000027433	Xrn2	94	68.634	Mus_musculus
ENSPMEG00000011798	xrn2	99	68.988	MGP_PahariEiJ_G0025843	Xrn2	94	68.450	Mus_pahari
ENSPMEG00000011798	xrn2	99	69.097	MGP_SPRETEiJ_G0025318	Xrn2	94	68.634	Mus_spretus
ENSPMEG00000011798	xrn2	99	67.842	ENSMPUG00000001198	XRN2	88	66.987	Mustela_putorius_furo
ENSPMEG00000011798	xrn2	99	69.172	ENSMLUG00000001536	XRN2	94	68.301	Myotis_lucifugus
ENSPMEG00000011798	xrn2	99	69.423	ENSNGAG00000018138	Xrn2	94	68.743	Nannospalax_galili
ENSPMEG00000011798	xrn2	89	86.626	ENSNBRG00000008062	xrn2	91	86.626	Neolamprologus_brichardi
ENSPMEG00000011798	xrn2	99	69.206	ENSNLEG00000009991	XRN2	94	68.335	Nomascus_leucogenys
ENSPMEG00000011798	xrn2	51	82.222	ENSMEUG00000008622	-	50	82.222	Notamacropus_eugenii
ENSPMEG00000011798	xrn2	76	69.136	ENSOPRG00000001397	-	60	69.136	Ochotona_princeps
ENSPMEG00000011798	xrn2	99	69.314	ENSODEG00000010745	-	94	68.444	Octodon_degus
ENSPMEG00000011798	xrn2	97	63.504	ENSODEG00000000860	-	93	63.058	Octodon_degus
ENSPMEG00000011798	xrn2	99	82.869	ENSONIG00000018720	xrn2	94	81.582	Oreochromis_niloticus
ENSPMEG00000011798	xrn2	99	69.231	ENSOANG00000015673	XRN2	94	69.231	Ornithorhynchus_anatinus
ENSPMEG00000011798	xrn2	99	69.532	ENSOCUG00000013468	XRN2	94	68.662	Oryctolagus_cuniculus
ENSPMEG00000011798	xrn2	98	82.431	ENSORLG00000017213	xrn2	91	85.767	Oryzias_latipes
ENSPMEG00000011798	xrn2	98	82.431	ENSORLG00020001824	xrn2	94	82.131	Oryzias_latipes_hni
ENSPMEG00000011798	xrn2	98	81.567	ENSORLG00015019747	xrn2	94	81.909	Oryzias_latipes_hsok
ENSPMEG00000011798	xrn2	97	81.573	ENSOMEG00000019820	xrn2	94	80.519	Oryzias_melastigma
ENSPMEG00000011798	xrn2	99	69.089	ENSOGAG00000001068	XRN2	94	68.221	Otolemur_garnettii
ENSPMEG00000011798	xrn2	99	68.335	ENSOARG00000004443	XRN2	97	67.465	Ovis_aries
ENSPMEG00000011798	xrn2	99	69.206	ENSPPAG00000033549	XRN2	94	68.335	Pan_paniscus
ENSPMEG00000011798	xrn2	99	68.988	ENSPPRG00000008732	XRN2	94	68.118	Panthera_pardus
ENSPMEG00000011798	xrn2	99	68.988	ENSPTIG00000015683	XRN2	94	68.118	Panthera_tigris_altaica
ENSPMEG00000011798	xrn2	99	69.206	ENSPTRG00000013308	XRN2	94	68.335	Pan_troglodytes
ENSPMEG00000011798	xrn2	99	69.350	ENSPANG00000018088	XRN2	94	68.335	Papio_anubis
ENSPMEG00000011798	xrn2	99	75.000	ENSPKIG00000016889	xrn2	94	75.326	Paramormyrops_kingsleyae
ENSPMEG00000011798	xrn2	85	76.350	ENSPSIG00000014666	XRN2	100	76.350	Pelodiscus_sinensis
ENSPMEG00000011798	xrn2	99	69.423	ENSPEMG00000000111	Xrn2	94	68.634	Peromyscus_maniculatus_bairdii
ENSPMEG00000011798	xrn2	100	99.562	ENSPFOG00000004182	xrn2	94	99.562	Poecilia_formosa
ENSPMEG00000011798	xrn2	91	97.602	ENSPLAG00000007351	xrn2	93	97.602	Poecilia_latipinna
ENSPMEG00000011798	xrn2	92	98.091	ENSPREG00000012452	xrn2	94	98.088	Poecilia_reticulata
ENSPMEG00000011798	xrn2	99	68.879	ENSPPYG00000010755	XRN2	94	68.009	Pongo_abelii
ENSPMEG00000011798	xrn2	99	65.255	ENSPCAG00000011191	XRN2	94	64.340	Procavia_capensis
ENSPMEG00000011798	xrn2	99	62.894	ENSPCOG00000016468	XRN2	94	62.242	Propithecus_coquereli
ENSPMEG00000011798	xrn2	92	63.261	ENSPVAG00000004596	XRN2	87	63.261	Pteropus_vampyrus
ENSPMEG00000011798	xrn2	89	84.540	ENSPNYG00000001765	xrn2	91	84.540	Pundamilia_nyererei
ENSPMEG00000011798	xrn2	100	76.262	ENSPNAG00000010956	xrn2	94	76.022	Pygocentrus_nattereri
ENSPMEG00000011798	xrn2	99	69.750	ENSRNOG00000011785	Xrn2	94	69.290	Rattus_norvegicus
ENSPMEG00000011798	xrn2	85	74.742	ENSRBIG00000036193	XRN2	93	74.742	Rhinopithecus_bieti
ENSPMEG00000011798	xrn2	99	69.350	ENSRROG00000044400	XRN2	85	68.335	Rhinopithecus_roxellana
ENSPMEG00000011798	xrn2	66	50.761	YOR048C	RAT1	75	53.073	Saccharomyces_cerevisiae
ENSPMEG00000011798	xrn2	99	69.097	ENSSBOG00000021014	XRN2	94	68.226	Saimiri_boliviensis_boliviensis
ENSPMEG00000011798	xrn2	99	75.270	ENSSFOG00015001091	xrn2	94	74.811	Scleropages_formosus
ENSPMEG00000011798	xrn2	96	84.234	ENSSMAG00000007834	xrn2	94	82.277	Scophthalmus_maximus
ENSPMEG00000011798	xrn2	95	82.110	ENSSDUG00000012802	xrn2	94	84.420	Seriola_dumerili
ENSPMEG00000011798	xrn2	92	86.038	ENSSLDG00000021273	xrn2	92	86.967	Seriola_lalandi_dorsalis
ENSPMEG00000011798	xrn2	79	72.973	ENSSARG00000005859	-	54	79.688	Sorex_araneus
ENSPMEG00000011798	xrn2	97	67.861	ENSSPUG00000005485	XRN2	90	67.861	Sphenodon_punctatus
ENSPMEG00000011798	xrn2	100	83.822	ENSSPAG00000016027	xrn2	94	83.532	Stegastes_partitus
ENSPMEG00000011798	xrn2	99	67.247	ENSSSCG00000007109	XRN2	94	66.376	Sus_scrofa
ENSPMEG00000011798	xrn2	97	68.492	ENSTGUG00000007535	XRN2	94	66.559	Taeniopygia_guttata
ENSPMEG00000011798	xrn2	99	77.695	ENSTRUG00000015489	xrn2	95	78.122	Takifugu_rubripes
ENSPMEG00000011798	xrn2	99	74.518	ENSTNIG00000010712	xrn2	94	75.190	Tetraodon_nigroviridis
ENSPMEG00000011798	xrn2	99	68.879	ENSTBEG00000004119	XRN2	94	68.335	Tupaia_belangeri
ENSPMEG00000011798	xrn2	93	76.803	ENSTTRG00000009087	XRN2	87	76.803	Tursiops_truncatus
ENSPMEG00000011798	xrn2	99	69.097	ENSUAMG00000024634	XRN2	94	68.226	Ursus_americanus
ENSPMEG00000011798	xrn2	99	68.988	ENSUMAG00000004012	XRN2	92	68.118	Ursus_maritimus
ENSPMEG00000011798	xrn2	94	64.319	ENSVPAG00000010694	XRN2	83	83.172	Vicugna_pacos
ENSPMEG00000011798	xrn2	99	69.206	ENSVVUG00000012178	XRN2	94	68.335	Vulpes_vulpes
ENSPMEG00000011798	xrn2	99	69.684	ENSXETG00000023501	xrn2	94	69.029	Xenopus_tropicalis
ENSPMEG00000011798	xrn2	100	97.043	ENSXMAG00000000242	xrn2	94	97.043	Xiphophorus_maculatus