EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000011804 (Gene tree)
Gene ID: 106924172
Gene Symbol: prpf38a
Alias: -
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 13744 bases
Position: chrKQ551661.1:168202-181945
Accession: 106924172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000027420	PRP38	PF03371.15	2.9e-63	1	1
ENSPMEP00000009916	PRP38	PF03371.15	3e-63	1	1
ENSPMEP00000027439	PRP38	PF03371.15	3e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000016626	-	4880	-	ENSPMEP00000009916	306 (aa)	-	-
ENSPMET00000000021	-	930	-	ENSPMEP00000027420	309 (aa)	-	-
ENSPMET00000030796	-	5007	XM_014997739	ENSPMEP00000027439	309 (aa)	XP_014853225	UPI000293A947

Gene Model

Click here to download ENSPMEG00000011804's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000011804's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000011804	prpf38a	100	82.428	ENSG00000134748	PRPF38A	84	79.323	Homo_sapiens
ENSPMEG00000011804	prpf38a	100	96.440	ENSAPOG00000011652	prpf38a	100	96.440	Acanthochromis_polyacanthus
ENSPMEG00000011804	prpf38a	100	82.428	ENSAMEG00000009319	PRPF38A	84	79.323	Ailuropoda_melanoleuca
ENSPMEG00000011804	prpf38a	72	92.760	ENSACIG00000012292	prpf38a	85	79.848	Amphilophus_citrinellus
ENSPMEG00000011804	prpf38a	100	96.440	ENSAOCG00000018004	prpf38a	100	96.440	Amphiprion_ocellaris
ENSPMEG00000011804	prpf38a	100	96.440	ENSAPEG00000021414	prpf38a	100	96.440	Amphiprion_percula
ENSPMEG00000011804	prpf38a	72	94.570	ENSATEG00000004608	prpf38a	92	82.292	Anabas_testudineus
ENSPMEG00000011804	prpf38a	80	79.032	ENSAPLG00000005827	PRPF38A	79	73.762	Anas_platyrhynchos
ENSPMEG00000011804	prpf38a	100	80.831	ENSACAG00000008249	PRPF38A	84	77.154	Anolis_carolinensis
ENSPMEG00000011804	prpf38a	100	82.428	ENSANAG00000027839	PRPF38A	84	79.323	Aotus_nancymaae
ENSPMEG00000011804	prpf38a	100	60.952	ENSANAG00000029204	-	80	52.239	Aotus_nancymaae
ENSPMEG00000011804	prpf38a	72	94.118	ENSACLG00000021595	prpf38a	92	80.623	Astatotilapia_calliptera
ENSPMEG00000011804	prpf38a	100	83.706	ENSAMXG00000029274	prpf38a	92	81.100	Astyanax_mexicanus
ENSPMEG00000011804	prpf38a	100	82.428	ENSBTAG00000002720	PRPF38A	89	79.026	Bos_taurus
ENSPMEG00000011804	prpf38a	63	63.590	WBGene00008380	prp-38	85	50.896	Caenorhabditis_elegans
ENSPMEG00000011804	prpf38a	100	82.428	ENSCJAG00000021594	PRPF38A	88	79.182	Callithrix_jacchus
ENSPMEG00000011804	prpf38a	100	82.428	ENSCAFG00000003740	PRPF38A	84	79.323	Canis_familiaris
ENSPMEG00000011804	prpf38a	100	82.428	ENSCAFG00020010939	PRPF38A	84	79.323	Canis_lupus_dingo
ENSPMEG00000011804	prpf38a	100	82.428	ENSCHIG00000024730	PRPF38A	84	79.323	Capra_hircus
ENSPMEG00000011804	prpf38a	100	82.428	ENSTSYG00000009868	-	84	79.323	Carlito_syrichta
ENSPMEG00000011804	prpf38a	87	78.889	ENSTSYG00000031994	-	77	74.888	Carlito_syrichta
ENSPMEG00000011804	prpf38a	100	84.244	ENSCPOG00000005079	PRPF38A	84	79.545	Cavia_porcellus
ENSPMEG00000011804	prpf38a	75	89.610	ENSCCAG00000026502	PRPF38A	84	79.323	Cebus_capucinus
ENSPMEG00000011804	prpf38a	93	55.363	ENSCATG00000044190	-	80	53.659	Cercocebus_atys
ENSPMEG00000011804	prpf38a	100	82.428	ENSCATG00000032296	PRPF38A	84	79.323	Cercocebus_atys
ENSPMEG00000011804	prpf38a	100	82.428	ENSCLAG00000005816	PRPF38A	84	79.323	Chinchilla_lanigera
ENSPMEG00000011804	prpf38a	100	82.109	ENSCPBG00000014791	PRPF38A	84	78.652	Chrysemys_picta_bellii
ENSPMEG00000011804	prpf38a	75	68.398	ENSCSAVG00000009580	-	62	76.064	Ciona_savignyi
ENSPMEG00000011804	prpf38a	75	89.610	ENSCANG00000032608	PRPF38A	87	79.323	Colobus_angolensis_palliatus
ENSPMEG00000011804	prpf38a	100	82.428	ENSCGRG00001018502	-	84	79.323	Cricetulus_griseus_chok1gshd
ENSPMEG00000011804	prpf38a	84	72.797	ENSCGRG00001002557	-	87	68.702	Cricetulus_griseus_chok1gshd
ENSPMEG00000011804	prpf38a	100	82.428	ENSCGRG00000014868	Prpf38a	84	79.323	Cricetulus_griseus_crigri
ENSPMEG00000011804	prpf38a	72	93.665	ENSCSEG00000001269	prpf38a	76	93.665	Cynoglossus_semilaevis
ENSPMEG00000011804	prpf38a	100	99.029	ENSCVAG00000012305	prpf38a	100	99.029	Cyprinodon_variegatus
ENSPMEG00000011804	prpf38a	100	83.067	ENSDARG00000039213	prpf38a	92	80.137	Danio_rerio
ENSPMEG00000011804	prpf38a	100	82.428	ENSDNOG00000042326	PRPF38A	85	79.323	Dasypus_novemcinctus
ENSPMEG00000011804	prpf38a	84	75.676	ENSDORG00000025371	-	89	74.000	Dipodomys_ordii
ENSPMEG00000011804	prpf38a	84	75.676	ENSDORG00000023691	-	89	74.000	Dipodomys_ordii
ENSPMEG00000011804	prpf38a	85	97.917	ENSDORG00000023857	-	64	97.917	Dipodomys_ordii
ENSPMEG00000011804	prpf38a	65	73.632	FBgn0050342	Prp38	57	76.064	Drosophila_melanogaster
ENSPMEG00000011804	prpf38a	77	81.590	ENSEBUG00000012588	prpf38a	85	73.881	Eptatretus_burgeri
ENSPMEG00000011804	prpf38a	100	82.428	ENSEASG00005014427	PRPF38A	84	79.323	Equus_asinus_asinus
ENSPMEG00000011804	prpf38a	100	82.428	ENSECAG00000022628	PRPF38A	84	79.323	Equus_caballus
ENSPMEG00000011804	prpf38a	72	92.760	ENSELUG00000021094	prpf38a	96	81.119	Esox_lucius
ENSPMEG00000011804	prpf38a	100	82.428	ENSFCAG00000002518	PRPF38A	84	79.323	Felis_catus
ENSPMEG00000011804	prpf38a	99	77.419	ENSFALG00000003612	-	86	75.954	Ficedula_albicollis
ENSPMEG00000011804	prpf38a	88	80.147	ENSFALG00000005598	-	81	75.664	Ficedula_albicollis
ENSPMEG00000011804	prpf38a	100	83.923	ENSFDAG00000011287	PRPF38A	84	79.323	Fukomys_damarensis
ENSPMEG00000011804	prpf38a	95	98.305	ENSFHEG00000014317	prpf38a	100	98.305	Fundulus_heteroclitus
ENSPMEG00000011804	prpf38a	54	98.193	ENSGMOG00000011384	prpf38a	54	98.193	Gadus_morhua
ENSPMEG00000011804	prpf38a	100	82.748	ENSGALG00000010627	PRPF38A	84	79.401	Gallus_gallus
ENSPMEG00000011804	prpf38a	100	100.000	ENSGAFG00000012422	prpf38a	100	100.000	Gambusia_affinis
ENSPMEG00000011804	prpf38a	100	94.534	ENSGACG00000005423	prpf38a	100	94.534	Gasterosteus_aculeatus
ENSPMEG00000011804	prpf38a	55	92.941	ENSGACG00000000182	-	100	92.941	Gasterosteus_aculeatus
ENSPMEG00000011804	prpf38a	100	82.109	ENSGAGG00000020547	PRPF38A	84	78.652	Gopherus_agassizii
ENSPMEG00000011804	prpf38a	100	82.428	ENSGGOG00000003940	PRPF38A	84	79.323	Gorilla_gorilla
ENSPMEG00000011804	prpf38a	66	96.059	ENSHBUG00000020572	prpf38a	86	96.059	Haplochromis_burtoni
ENSPMEG00000011804	prpf38a	100	82.428	ENSHGLG00000000475	PRPF38A	84	79.323	Heterocephalus_glaber_female
ENSPMEG00000011804	prpf38a	100	74.920	ENSHGLG00000007918	-	81	71.373	Heterocephalus_glaber_female
ENSPMEG00000011804	prpf38a	100	74.920	ENSHGLG00100003928	-	81	71.373	Heterocephalus_glaber_male
ENSPMEG00000011804	prpf38a	100	82.428	ENSHGLG00100008935	PRPF38A	84	79.323	Heterocephalus_glaber_male
ENSPMEG00000011804	prpf38a	59	93.956	ENSHCOG00000020781	prpf38a	59	94.149	Hippocampus_comes
ENSPMEG00000011804	prpf38a	90	80.556	ENSIPUG00000005757	prpf38a	93	80.756	Ictalurus_punctatus
ENSPMEG00000011804	prpf38a	100	82.428	ENSSTOG00000015610	PRPF38A	84	79.323	Ictidomys_tridecemlineatus
ENSPMEG00000011804	prpf38a	100	81.789	ENSJJAG00000015811	Prpf38a	84	78.571	Jaculus_jaculus
ENSPMEG00000011804	prpf38a	100	97.087	ENSKMAG00000006588	prpf38a	100	97.087	Kryptolebias_marmoratus
ENSPMEG00000011804	prpf38a	100	93.204	ENSLBEG00000020585	prpf38a	90	81.338	Labrus_bergylta
ENSPMEG00000011804	prpf38a	100	82.428	ENSLACG00000011495	PRPF38A	84	77.820	Latimeria_chalumnae
ENSPMEG00000011804	prpf38a	100	91.935	ENSLOCG00000006262	prpf38a	92	80.277	Lepisosteus_oculatus
ENSPMEG00000011804	prpf38a	100	82.428	ENSLAFG00000025862	PRPF38A	84	79.323	Loxodonta_africana
ENSPMEG00000011804	prpf38a	100	82.428	ENSMFAG00000039449	PRPF38A	96	77.288	Macaca_fascicularis
ENSPMEG00000011804	prpf38a	88	79.779	ENSMMUG00000014333	PRPF38A	79	75.221	Macaca_mulatta
ENSPMEG00000011804	prpf38a	100	82.428	ENSMNEG00000031221	PRPF38A	84	79.323	Macaca_nemestrina
ENSPMEG00000011804	prpf38a	93	54.671	ENSMNEG00000040242	-	81	53.815	Macaca_nemestrina
ENSPMEG00000011804	prpf38a	100	82.428	ENSMLEG00000041105	PRPF38A	84	79.323	Mandrillus_leucophaeus
ENSPMEG00000011804	prpf38a	100	96.440	ENSMAMG00000015431	prpf38a	100	96.440	Mastacembelus_armatus
ENSPMEG00000011804	prpf38a	72	94.118	ENSMZEG00005017838	prpf38a	92	80.623	Maylandia_zebra
ENSPMEG00000011804	prpf38a	75	90.043	ENSMGAG00000011176	PRPF38A	87	79.401	Meleagris_gallopavo
ENSPMEG00000011804	prpf38a	85	84.848	ENSMAUG00000018029	-	98	74.905	Mesocricetus_auratus
ENSPMEG00000011804	prpf38a	100	82.428	ENSMICG00000014193	PRPF38A	84	79.323	Microcebus_murinus
ENSPMEG00000011804	prpf38a	100	82.428	ENSMOCG00000013080	Prpf38a	84	79.323	Microtus_ochrogaster
ENSPMEG00000011804	prpf38a	99	88.274	ENSMMOG00000016972	prpf38a	85	88.550	Mola_mola
ENSPMEG00000011804	prpf38a	100	80.255	ENSMODG00000000644	PRPF38A	84	78.571	Monodelphis_domestica
ENSPMEG00000011804	prpf38a	100	96.117	ENSMALG00000019363	prpf38a	97	96.117	Monopterus_albus
ENSPMEG00000011804	prpf38a	100	82.109	MGP_CAROLIEiJ_G0026269	Prpf38a	84	78.947	Mus_caroli
ENSPMEG00000011804	prpf38a	100	82.109	ENSMUSG00000063800	Prpf38a	84	78.947	Mus_musculus
ENSPMEG00000011804	prpf38a	100	82.109	MGP_PahariEiJ_G0028602	Prpf38a	84	78.947	Mus_pahari
ENSPMEG00000011804	prpf38a	100	81.789	MGP_SPRETEiJ_G0027238	Prpf38a	93	94.149	Mus_spretus
ENSPMEG00000011804	prpf38a	100	82.428	ENSMPUG00000006896	PRPF38A	84	79.323	Mustela_putorius_furo
ENSPMEG00000011804	prpf38a	100	84.566	ENSNGAG00000011884	Prpf38a	83	81.369	Nannospalax_galili
ENSPMEG00000011804	prpf38a	72	92.760	ENSNBRG00000004013	prpf38a	83	80.989	Neolamprologus_brichardi
ENSPMEG00000011804	prpf38a	93	57.388	ENSNLEG00000033398	-	74	48.062	Nomascus_leucogenys
ENSPMEG00000011804	prpf38a	97	63.816	ENSNLEG00000012592	-	83	54.135	Nomascus_leucogenys
ENSPMEG00000011804	prpf38a	93	81.379	ENSNLEG00000017999	PRPF38A	76	77.778	Nomascus_leucogenys
ENSPMEG00000011804	prpf38a	100	78.914	ENSMEUG00000003860	PRPF38A	84	75.188	Notamacropus_eugenii
ENSPMEG00000011804	prpf38a	74	89.912	ENSOPRG00000008985	PRPF38A	92	90.498	Ochotona_princeps
ENSPMEG00000011804	prpf38a	100	82.428	ENSODEG00000005869	PRPF38A	84	79.323	Octodon_degus
ENSPMEG00000011804	prpf38a	72	93.665	ENSONIG00000007816	prpf38a	92	80.556	Oreochromis_niloticus
ENSPMEG00000011804	prpf38a	75	45.494	ENSOANG00000009541	-	85	41.328	Ornithorhynchus_anatinus
ENSPMEG00000011804	prpf38a	100	82.428	ENSOCUG00000000963	PRPF38A	84	79.323	Oryctolagus_cuniculus
ENSPMEG00000011804	prpf38a	100	96.117	ENSORLG00000013485	prpf38a	100	96.117	Oryzias_latipes
ENSPMEG00000011804	prpf38a	100	96.117	ENSORLG00020002130	prpf38a	100	96.117	Oryzias_latipes_hni
ENSPMEG00000011804	prpf38a	100	95.793	ENSORLG00015021393	prpf38a	96	83.333	Oryzias_latipes_hsok
ENSPMEG00000011804	prpf38a	100	95.793	ENSOMEG00000016333	prpf38a	100	95.793	Oryzias_melastigma
ENSPMEG00000011804	prpf38a	100	82.428	ENSOGAG00000005423	PRPF38A	84	79.323	Otolemur_garnettii
ENSPMEG00000011804	prpf38a	100	82.428	ENSOARG00000005373	PRPF38A	84	79.323	Ovis_aries
ENSPMEG00000011804	prpf38a	100	82.428	ENSPPAG00000030905	PRPF38A	84	79.323	Pan_paniscus
ENSPMEG00000011804	prpf38a	93	69.759	ENSPPAG00000033867	-	86	62.548	Pan_paniscus
ENSPMEG00000011804	prpf38a	100	82.428	ENSPPRG00000013268	PRPF38A	84	79.323	Panthera_pardus
ENSPMEG00000011804	prpf38a	100	82.428	ENSPTIG00000015419	PRPF38A	84	79.323	Panthera_tigris_altaica
ENSPMEG00000011804	prpf38a	100	82.428	ENSPTRG00000000739	PRPF38A	88	79.182	Pan_troglodytes
ENSPMEG00000011804	prpf38a	100	82.428	ENSPANG00000015483	PRPF38A	84	79.323	Papio_anubis
ENSPMEG00000011804	prpf38a	100	93.204	ENSPKIG00000011439	prpf38a	92	80.556	Paramormyrops_kingsleyae
ENSPMEG00000011804	prpf38a	100	81.789	ENSPSIG00000017487	PRPF38A	84	78.652	Pelodiscus_sinensis
ENSPMEG00000011804	prpf38a	99	74.172	ENSPMGG00000021352	prpf38a	78	93.363	Periophthalmus_magnuspinnatus
ENSPMEG00000011804	prpf38a	100	82.428	ENSPEMG00000023277	-	84	79.323	Peromyscus_maniculatus_bairdii
ENSPMEG00000011804	prpf38a	100	80.952	ENSPEMG00000011212	-	86	75.273	Peromyscus_maniculatus_bairdii
ENSPMEG00000011804	prpf38a	100	79.936	ENSPCIG00000022369	-	84	78.195	Phascolarctos_cinereus
ENSPMEG00000011804	prpf38a	100	100.000	ENSPFOG00000004248	prpf38a	100	100.000	Poecilia_formosa
ENSPMEG00000011804	prpf38a	100	100.000	ENSPLAG00000010328	prpf38a	100	100.000	Poecilia_latipinna
ENSPMEG00000011804	prpf38a	100	89.602	ENSPREG00000002835	prpf38a	100	89.602	Poecilia_reticulata
ENSPMEG00000011804	prpf38a	100	74.528	ENSPPYG00000001348	PRPF38A	84	70.111	Pongo_abelii
ENSPMEG00000011804	prpf38a	100	82.109	ENSPCAG00000013328	PRPF38A	84	78.947	Procavia_capensis
ENSPMEG00000011804	prpf38a	100	82.428	ENSPCOG00000016387	-	84	79.323	Propithecus_coquereli
ENSPMEG00000011804	prpf38a	100	67.638	ENSPCOG00000020709	-	64	80.319	Propithecus_coquereli
ENSPMEG00000011804	prpf38a	100	82.428	ENSPVAG00000009803	PRPF38A	84	79.323	Pteropus_vampyrus
ENSPMEG00000011804	prpf38a	72	94.118	ENSPNYG00000005571	prpf38a	92	80.623	Pundamilia_nyererei
ENSPMEG00000011804	prpf38a	100	83.067	ENSPNAG00000010399	prpf38a	92	80.412	Pygocentrus_nattereri
ENSPMEG00000011804	prpf38a	100	82.748	ENSRNOG00000009451	Prpf38a	84	79.699	Rattus_norvegicus
ENSPMEG00000011804	prpf38a	100	82.428	ENSRBIG00000036442	PRPF38A	87	79.323	Rhinopithecus_bieti
ENSPMEG00000011804	prpf38a	98	71.475	ENSRROG00000040003	-	72	74.208	Rhinopithecus_roxellana
ENSPMEG00000011804	prpf38a	100	82.428	ENSRROG00000032788	PRPF38A	84	79.323	Rhinopithecus_roxellana
ENSPMEG00000011804	prpf38a	100	82.428	ENSSBOG00000019515	PRPF38A	84	79.323	Saimiri_boliviensis_boliviensis
ENSPMEG00000011804	prpf38a	87	77.206	ENSSHAG00000006906	-	81	74.554	Sarcophilus_harrisii
ENSPMEG00000011804	prpf38a	96	66.555	ENSSHAG00000006029	-	74	76.923	Sarcophilus_harrisii
ENSPMEG00000011804	prpf38a	100	92.258	ENSSFOG00015013572	prpf38a	92	77.509	Scleropages_formosus
ENSPMEG00000011804	prpf38a	72	95.023	ENSSMAG00000015379	prpf38a	92	82.007	Scophthalmus_maximus
ENSPMEG00000011804	prpf38a	100	96.440	ENSSDUG00000001324	prpf38a	100	96.440	Seriola_dumerili
ENSPMEG00000011804	prpf38a	100	96.440	ENSSLDG00000014803	prpf38a	100	96.440	Seriola_lalandi_dorsalis
ENSPMEG00000011804	prpf38a	100	65.495	ENSSARG00000014458	PRPF38A	84	59.398	Sorex_araneus
ENSPMEG00000011804	prpf38a	100	80.831	ENSSPUG00000013259	PRPF38A	84	77.154	Sphenodon_punctatus
ENSPMEG00000011804	prpf38a	86	69.395	ENSSPAG00000010449	prpf38a	89	69.395	Stegastes_partitus
ENSPMEG00000011804	prpf38a	100	82.428	ENSSSCG00000028288	PRPF38A	84	79.323	Sus_scrofa
ENSPMEG00000011804	prpf38a	100	78.914	ENSTGUG00000008995	PRPF38A	84	74.906	Taeniopygia_guttata
ENSPMEG00000011804	prpf38a	72	94.118	ENSTRUG00000003374	prpf38a	68	94.118	Takifugu_rubripes
ENSPMEG00000011804	prpf38a	100	93.569	ENSTNIG00000005533	prpf38a	100	93.569	Tetraodon_nigroviridis
ENSPMEG00000011804	prpf38a	100	81.789	ENSTBEG00000000725	PRPF38A	84	79.323	Tupaia_belangeri
ENSPMEG00000011804	prpf38a	100	82.428	ENSTTRG00000016139	PRPF38A	84	79.323	Tursiops_truncatus
ENSPMEG00000011804	prpf38a	100	82.428	ENSUAMG00000000625	PRPF38A	84	79.323	Ursus_americanus
ENSPMEG00000011804	prpf38a	100	82.428	ENSUMAG00000022674	PRPF38A	84	79.323	Ursus_maritimus
ENSPMEG00000011804	prpf38a	75	89.177	ENSVPAG00000000907	PRPF38A	84	78.947	Vicugna_pacos
ENSPMEG00000011804	prpf38a	100	82.428	ENSVVUG00000004475	PRPF38A	84	79.323	Vulpes_vulpes
ENSPMEG00000011804	prpf38a	100	81.210	ENSXETG00000008060	prpf38a	92	75.172	Xenopus_tropicalis
ENSPMEG00000011804	prpf38a	100	95.498	ENSXCOG00000007393	prpf38a	100	95.498	Xiphophorus_couchianus
ENSPMEG00000011804	prpf38a	100	100.000	ENSXMAG00000026143	prpf38a	100	100.000	Xiphophorus_maculatus