EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000012071 (Gene tree)
Gene ID: 106903615
Gene Symbol: -
Alias: -
Full Name: exonuclease 3'-5' domain containing 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 5584 bases
Position: chrKQ551051.1:159010-164593
Accession: 106903615
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000027577	DNA_pol_A_exo1	PF01612.20	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000016963	-	1948	XM_014967553	ENSPMEP00000027577	520 (aa)	XP_014823039	UPI00072E8BFD

Gene Model

Click here to download ENSPMEG00000012071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000012071's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000012071	-	72	41.045	ENSG00000178997	EXD1	70	41.542	Homo_sapiens
ENSPMEG00000012071	-	72	75.610	ENSAPOG00000004287	-	92	75.610	Acanthochromis_polyacanthus
ENSPMEG00000012071	-	73	40.732	ENSAMEG00000016793	EXD1	71	40.732	Ailuropoda_melanoleuca
ENSPMEG00000012071	-	78	65.116	ENSACIG00000008996	-	97	65.116	Amphilophus_citrinellus
ENSPMEG00000012071	-	89	63.834	ENSAOCG00000009355	-	98	61.538	Amphiprion_ocellaris
ENSPMEG00000012071	-	63	76.667	ENSAPEG00000002194	-	90	76.667	Amphiprion_percula
ENSPMEG00000012071	-	76	57.727	ENSATEG00000002623	-	100	57.273	Anabas_testudineus
ENSPMEG00000012071	-	71	40.206	ENSACAG00000003676	EXD1	99	40.206	Anolis_carolinensis
ENSPMEG00000012071	-	72	41.791	ENSANAG00000029058	EXD1	70	41.791	Aotus_nancymaae
ENSPMEG00000012071	-	90	59.766	ENSACLG00000001361	-	96	59.766	Astatotilapia_calliptera
ENSPMEG00000012071	-	89	51.891	ENSAMXG00000026016	-	91	51.891	Astyanax_mexicanus
ENSPMEG00000012071	-	64	43.155	ENSBTAG00000008363	EXD1	69	43.155	Bos_taurus
ENSPMEG00000012071	-	72	40.779	ENSCJAG00000020765	EXD1	68	40.779	Callithrix_jacchus
ENSPMEG00000012071	-	74	41.032	ENSCAFG00000009510	EXD1	71	41.032	Canis_familiaris
ENSPMEG00000012071	-	51	45.660	ENSCAFG00020005504	EXD1	63	45.660	Canis_lupus_dingo
ENSPMEG00000012071	-	83	39.024	ENSCHIG00000019606	EXD1	81	39.024	Capra_hircus
ENSPMEG00000012071	-	72	41.818	ENSCPOG00000010573	EXD1	68	41.818	Cavia_porcellus
ENSPMEG00000012071	-	72	39.950	ENSCCAG00000016905	EXD1	69	39.950	Cebus_capucinus
ENSPMEG00000012071	-	71	41.162	ENSCATG00000037400	EXD1	68	41.162	Cercocebus_atys
ENSPMEG00000012071	-	51	36.996	ENSCSAG00000007647	EXD1	53	36.996	Chlorocebus_sabaeus
ENSPMEG00000012071	-	69	41.344	ENSCPBG00000013511	EXD1	63	42.377	Chrysemys_picta_bellii
ENSPMEG00000012071	-	71	41.398	ENSCANG00000036848	EXD1	67	41.398	Colobus_angolensis_palliatus
ENSPMEG00000012071	-	72	41.791	ENSCGRG00001011355	Exd1	68	41.791	Cricetulus_griseus_chok1gshd
ENSPMEG00000012071	-	72	41.791	ENSCGRG00000011633	Exd1	70	41.791	Cricetulus_griseus_crigri
ENSPMEG00000012071	-	100	55.741	ENSCSEG00000000904	-	100	55.556	Cynoglossus_semilaevis
ENSPMEG00000012071	-	62	54.037	ENSCVAG00000013735	-	86	63.717	Cyprinodon_variegatus
ENSPMEG00000012071	-	67	46.991	ENSDARG00000098669	exd1	94	49.158	Danio_rerio
ENSPMEG00000012071	-	72	40.943	ENSDNOG00000011410	EXD1	70	40.943	Dasypus_novemcinctus
ENSPMEG00000012071	-	56	46.102	ENSDORG00000012079	Exd1	60	46.102	Dipodomys_ordii
ENSPMEG00000012071	-	72	41.730	ENSEASG00005016394	EXD1	69	42.239	Equus_asinus_asinus
ENSPMEG00000012071	-	72	41.353	ENSECAG00000021250	EXD1	69	41.855	Equus_caballus
ENSPMEG00000012071	-	52	41.455	ENSEEUG00000001232	EXD1	54	41.455	Erinaceus_europaeus
ENSPMEG00000012071	-	88	53.033	ENSELUG00000006324	-	88	53.033	Esox_lucius
ENSPMEG00000012071	-	73	41.032	ENSFCAG00000028533	EXD1	71	41.032	Felis_catus
ENSPMEG00000012071	-	61	64.263	ENSGMOG00000015956	-	99	62.952	Gadus_morhua
ENSPMEG00000012071	-	70	40.256	ENSGALG00000041449	EXD1	95	40.256	Gallus_gallus
ENSPMEG00000012071	-	100	92.308	ENSGAFG00000017161	-	100	92.308	Gambusia_affinis
ENSPMEG00000012071	-	70	40.617	ENSGAGG00000019200	EXD1	63	40.617	Gopherus_agassizii
ENSPMEG00000012071	-	72	40.704	ENSGGOG00000004594	EXD1	70	40.955	Gorilla_gorilla
ENSPMEG00000012071	-	66	60.677	ENSHBUG00000017880	-	95	60.677	Haplochromis_burtoni
ENSPMEG00000012071	-	73	41.935	ENSHGLG00000015369	EXD1	70	41.935	Heterocephalus_glaber_female
ENSPMEG00000012071	-	70	42.308	ENSHGLG00100007398	EXD1	69	42.308	Heterocephalus_glaber_male
ENSPMEG00000012071	-	66	48.732	ENSIPUG00000003370	-	99	48.732	Ictalurus_punctatus
ENSPMEG00000012071	-	71	42.785	ENSSTOG00000014980	EXD1	68	42.532	Ictidomys_tridecemlineatus
ENSPMEG00000012071	-	53	73.188	ENSLBEG00000010957	-	88	73.188	Labrus_bergylta
ENSPMEG00000012071	-	99	58.127	ENSLBEG00000000022	-	91	61.782	Labrus_bergylta
ENSPMEG00000012071	-	74	42.961	ENSLACG00000006680	EXD1	70	42.105	Latimeria_chalumnae
ENSPMEG00000012071	-	71	50.656	ENSLOCG00000012278	-	95	50.656	Lepisosteus_oculatus
ENSPMEG00000012071	-	64	43.175	ENSLAFG00000014739	EXD1	68	43.175	Loxodonta_africana
ENSPMEG00000012071	-	71	40.909	ENSMFAG00000034670	EXD1	68	40.909	Macaca_fascicularis
ENSPMEG00000012071	-	71	40.909	ENSMMUG00000013991	EXD1	68	40.909	Macaca_mulatta
ENSPMEG00000012071	-	71	40.452	ENSMNEG00000037333	EXD1	68	40.452	Macaca_nemestrina
ENSPMEG00000012071	-	60	41.615	ENSMLEG00000033153	EXD1	95	41.615	Mandrillus_leucophaeus
ENSPMEG00000012071	-	66	56.695	ENSMAMG00000006592	exd1	73	56.695	Mastacembelus_armatus
ENSPMEG00000012071	-	88	60.040	ENSMZEG00005009193	-	98	60.040	Maylandia_zebra
ENSPMEG00000012071	-	68	38.903	ENSMGAG00000011179	EXD1	95	38.903	Meleagris_gallopavo
ENSPMEG00000012071	-	72	41.604	ENSMAUG00000002698	Exd1	69	41.604	Mesocricetus_auratus
ENSPMEG00000012071	-	72	41.791	ENSMICG00000014337	EXD1	69	41.791	Microcebus_murinus
ENSPMEG00000012071	-	71	42.025	ENSMOCG00000018151	Exd1	69	42.025	Microtus_ochrogaster
ENSPMEG00000012071	-	72	40.100	ENSMODG00000000164	EXD1	76	40.100	Monodelphis_domestica
ENSPMEG00000012071	-	73	62.730	ENSMALG00000015814	-	89	62.113	Monopterus_albus
ENSPMEG00000012071	-	81	40.848	MGP_CAROLIEiJ_G0024145	Exd1	77	40.625	Mus_caroli
ENSPMEG00000012071	-	74	41.667	ENSMUSG00000048647	Exd1	71	41.667	Mus_musculus
ENSPMEG00000012071	-	71	39.086	MGP_PahariEiJ_G0025588	Exd1	67	39.086	Mus_pahari
ENSPMEG00000012071	-	71	42.386	MGP_SPRETEiJ_G0025061	Exd1	68	42.386	Mus_spretus
ENSPMEG00000012071	-	80	38.636	ENSMPUG00000008811	EXD1	76	38.636	Mustela_putorius_furo
ENSPMEG00000012071	-	64	42.416	ENSMLUG00000001466	EXD1	67	42.416	Myotis_lucifugus
ENSPMEG00000012071	-	72	41.772	ENSNGAG00000002319	Exd1	69	41.772	Nannospalax_galili
ENSPMEG00000012071	-	53	72.628	ENSNBRG00000003229	-	73	72.628	Neolamprologus_brichardi
ENSPMEG00000012071	-	71	39.899	ENSNLEG00000003456	EXD1	68	39.899	Nomascus_leucogenys
ENSPMEG00000012071	-	72	70.588	ENSONIG00000012043	-	99	70.588	Oreochromis_niloticus
ENSPMEG00000012071	-	62	42.571	ENSOCUG00000013817	EXD1	69	42.571	Oryctolagus_cuniculus
ENSPMEG00000012071	-	88	57.872	ENSORLG00000026344	-	94	57.872	Oryzias_latipes
ENSPMEG00000012071	-	88	57.962	ENSORLG00020005465	-	94	57.962	Oryzias_latipes_hni
ENSPMEG00000012071	-	88	58.511	ENSORLG00015004848	-	94	58.511	Oryzias_latipes_hsok
ENSPMEG00000012071	-	88	56.785	ENSOMEG00000019812	-	95	57.054	Oryzias_melastigma
ENSPMEG00000012071	-	53	41.844	ENSOGAG00000013095	EXD1	53	41.577	Otolemur_garnettii
ENSPMEG00000012071	-	83	38.528	ENSOARG00000020330	EXD1	80	38.528	Ovis_aries
ENSPMEG00000012071	-	72	41.542	ENSPPAG00000033760	EXD1	70	41.294	Pan_paniscus
ENSPMEG00000012071	-	73	41.278	ENSPPRG00000011128	EXD1	71	41.278	Panthera_pardus
ENSPMEG00000012071	-	73	41.278	ENSPTIG00000020026	EXD1	71	41.278	Panthera_tigris_altaica
ENSPMEG00000012071	-	72	41.294	ENSPTRG00000006941	EXD1	70	41.294	Pan_troglodytes
ENSPMEG00000012071	-	71	40.909	ENSPANG00000019000	EXD1	68	40.909	Papio_anubis
ENSPMEG00000012071	-	71	54.987	ENSPKIG00000000671	-	70	54.987	Paramormyrops_kingsleyae
ENSPMEG00000012071	-	70	40.722	ENSPSIG00000014473	EXD1	63	41.237	Pelodiscus_sinensis
ENSPMEG00000012071	-	100	48.015	ENSPMGG00000015466	-	99	47.826	Periophthalmus_magnuspinnatus
ENSPMEG00000012071	-	70	41.327	ENSPCIG00000027845	EXD1	77	41.327	Phascolarctos_cinereus
ENSPMEG00000012071	-	81	99.526	ENSPFOG00000013673	-	100	99.526	Poecilia_formosa
ENSPMEG00000012071	-	100	98.846	ENSPLAG00000014262	-	100	98.846	Poecilia_latipinna
ENSPMEG00000012071	-	100	96.538	ENSPREG00000019468	-	100	96.538	Poecilia_reticulata
ENSPMEG00000012071	-	53	46.403	ENSPPYG00000006369	EXD1	53	46.403	Pongo_abelii
ENSPMEG00000012071	-	72	39.846	ENSPCOG00000026598	EXD1	67	42.693	Propithecus_coquereli
ENSPMEG00000012071	-	54	46.643	ENSPVAG00000003149	EXD1	55	46.643	Pteropus_vampyrus
ENSPMEG00000012071	-	75	58.853	ENSPNAG00000008931	exd1	83	58.853	Pygocentrus_nattereri
ENSPMEG00000012071	-	71	42.051	ENSRNOG00000025360	Exd1	69	42.051	Rattus_norvegicus
ENSPMEG00000012071	-	60	42.643	ENSRBIG00000037257	EXD1	94	42.643	Rhinopithecus_bieti
ENSPMEG00000012071	-	71	41.772	ENSRROG00000034491	EXD1	68	42.025	Rhinopithecus_roxellana
ENSPMEG00000012071	-	72	36.070	ENSSBOG00000024842	EXD1	67	36.070	Saimiri_boliviensis_boliviensis
ENSPMEG00000012071	-	75	39.100	ENSSHAG00000016701	EXD1	77	39.100	Sarcophilus_harrisii
ENSPMEG00000012071	-	65	46.018	ENSSFOG00015016852	-	92	46.018	Scleropages_formosus
ENSPMEG00000012071	-	72	52.830	ENSSMAG00000005451	-	86	52.817	Scophthalmus_maximus
ENSPMEG00000012071	-	98	60.638	ENSSDUG00000004368	exd1	99	60.461	Seriola_dumerili
ENSPMEG00000012071	-	84	75.610	ENSSLDG00000021803	-	94	75.610	Seriola_lalandi_dorsalis
ENSPMEG00000012071	-	52	47.232	ENSSARG00000009556	-	53	47.232	Sorex_araneus
ENSPMEG00000012071	-	70	38.904	ENSSPUG00000001716	EXD1	61	38.904	Sphenodon_punctatus
ENSPMEG00000012071	-	73	41.133	ENSSSCG00000004752	EXD1	71	41.133	Sus_scrofa
ENSPMEG00000012071	-	73	51.263	ENSTNIG00000017431	-	97	51.263	Tetraodon_nigroviridis
ENSPMEG00000012071	-	54	46.643	ENSTTRG00000009809	EXD1	54	46.643	Tursiops_truncatus
ENSPMEG00000012071	-	72	41.250	ENSUMAG00000012170	EXD1	70	41.250	Ursus_maritimus
ENSPMEG00000012071	-	54	45.936	ENSVPAG00000007758	EXD1	54	45.936	Vicugna_pacos
ENSPMEG00000012071	-	87	37.681	ENSVVUG00000026704	EXD1	85	38.095	Vulpes_vulpes
ENSPMEG00000012071	-	72	38.520	ENSXETG00000017895	exd1	96	38.520	Xenopus_tropicalis
ENSPMEG00000012071	-	62	84.568	ENSXCOG00000010879	-	88	84.568	Xiphophorus_couchianus
ENSPMEG00000012071	-	92	92.662	ENSXMAG00000014462	-	99	92.662	Xiphophorus_maculatus