EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000012100 (Gene tree)
Gene ID: 106911360
Gene Symbol: cpsf2
Alias: -
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 7243 bases
Position: chrKQ551075.1:423042-430284
Accession: 106911360
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000027562	Beta-Casp	PF10996.8	2.9e-21	1	1
ENSPMEP00000010153	Beta-Casp	PF10996.8	3e-21	1	1
ENSPMEP00000010153	Lactamase_B	PF00753.27	3.8e-05	1	1
ENSPMEP00000027562	RMMBL	PF07521.12	2.2e-14	1	1
ENSPMEP00000010153	RMMBL	PF07521.12	2.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000016927	-	3660	-	ENSPMEP00000010153	769 (aa)	-	-
ENSPMET00000030871	-	2933	XM_014978151	ENSPMEP00000027562	746 (aa)	XP_014833637	-

Gene Model

Click here to download ENSPMEG00000012100's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000012100's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000012100	cpsf2	100	85.027	ENSG00000165934	CPSF2	100	87.500	Homo_sapiens
ENSPMEG00000012100	cpsf2	100	95.174	ENSAPOG00000001242	cpsf2	96	95.383	Acanthochromis_polyacanthus
ENSPMEG00000012100	cpsf2	50	90.289	ENSAMEG00000014835	-	100	90.289	Ailuropoda_melanoleuca
ENSPMEG00000012100	cpsf2	100	94.645	ENSACIG00000009331	cpsf2	96	94.862	Amphilophus_citrinellus
ENSPMEG00000012100	cpsf2	100	95.710	ENSAOCG00000014095	cpsf2	96	95.910	Amphiprion_ocellaris
ENSPMEG00000012100	cpsf2	100	95.710	ENSAPEG00000009158	cpsf2	96	95.910	Amphiprion_percula
ENSPMEG00000012100	cpsf2	99	94.654	ENSATEG00000017644	cpsf2	99	93.792	Anabas_testudineus
ENSPMEG00000012100	cpsf2	100	84.780	ENSAPLG00000006330	CPSF2	96	85.545	Anas_platyrhynchos
ENSPMEG00000012100	cpsf2	100	84.626	ENSACAG00000009245	CPSF2	96	85.263	Anolis_carolinensis
ENSPMEG00000012100	cpsf2	100	85.294	ENSANAG00000022915	CPSF2	96	85.921	Aotus_nancymaae
ENSPMEG00000012100	cpsf2	100	89.037	ENSAMXG00000018696	cpsf2	99	87.312	Astyanax_mexicanus
ENSPMEG00000012100	cpsf2	100	85.160	ENSBTAG00000010227	CPSF2	96	85.789	Bos_taurus
ENSPMEG00000012100	cpsf2	100	41.133	WBGene00017313	cpsf-2	96	42.157	Caenorhabditis_elegans
ENSPMEG00000012100	cpsf2	100	85.294	ENSCJAG00000018069	CPSF2	96	85.921	Callithrix_jacchus
ENSPMEG00000012100	cpsf2	100	85.027	ENSCAFG00000010909	CPSF2	96	85.658	Canis_familiaris
ENSPMEG00000012100	cpsf2	100	85.027	ENSCAFG00020020670	CPSF2	96	85.658	Canis_lupus_dingo
ENSPMEG00000012100	cpsf2	100	85.160	ENSCHIG00000023848	CPSF2	96	85.789	Capra_hircus
ENSPMEG00000012100	cpsf2	100	85.428	ENSTSYG00000009036	CPSF2	96	86.053	Carlito_syrichta
ENSPMEG00000012100	cpsf2	100	85.160	ENSCPOG00000010899	CPSF2	96	85.789	Cavia_porcellus
ENSPMEG00000012100	cpsf2	100	85.294	ENSCCAG00000028088	CPSF2	96	85.921	Cebus_capucinus
ENSPMEG00000012100	cpsf2	100	85.160	ENSCATG00000030132	CPSF2	96	85.789	Cercocebus_atys
ENSPMEG00000012100	cpsf2	100	85.294	ENSCLAG00000012404	CPSF2	97	85.233	Chinchilla_lanigera
ENSPMEG00000012100	cpsf2	100	85.160	ENSCSAG00000011300	CPSF2	96	85.789	Chlorocebus_sabaeus
ENSPMEG00000012100	cpsf2	100	79.412	ENSCHOG00000012904	CPSF2	96	80.132	Choloepus_hoffmanni
ENSPMEG00000012100	cpsf2	100	84.893	ENSCPBG00000008766	CPSF2	94	85.658	Chrysemys_picta_bellii
ENSPMEG00000012100	cpsf2	100	52.294	ENSCING00000007881	-	96	52.510	Ciona_intestinalis
ENSPMEG00000012100	cpsf2	99	85.541	ENSCANG00000041651	CPSF2	100	85.521	Colobus_angolensis_palliatus
ENSPMEG00000012100	cpsf2	100	84.893	ENSCGRG00001006901	Cpsf2	96	85.526	Cricetulus_griseus_chok1gshd
ENSPMEG00000012100	cpsf2	100	84.893	ENSCGRG00000012416	Cpsf2	96	85.526	Cricetulus_griseus_crigri
ENSPMEG00000012100	cpsf2	100	93.039	ENSCSEG00000004116	cpsf2	96	93.281	Cynoglossus_semilaevis
ENSPMEG00000012100	cpsf2	100	98.123	ENSCVAG00000000095	cpsf2	96	98.283	Cyprinodon_variegatus
ENSPMEG00000012100	cpsf2	100	87.717	ENSDARG00000028971	cpsf2	99	85.764	Danio_rerio
ENSPMEG00000012100	cpsf2	100	85.160	ENSDNOG00000042757	CPSF2	96	85.789	Dasypus_novemcinctus
ENSPMEG00000012100	cpsf2	100	85.160	ENSDORG00000013709	Cpsf2	96	85.789	Dipodomys_ordii
ENSPMEG00000012100	cpsf2	99	53.590	FBgn0027873	Cpsf100	96	53.470	Drosophila_melanogaster
ENSPMEG00000012100	cpsf2	100	77.036	ENSETEG00000012123	CPSF2	96	77.792	Echinops_telfairi
ENSPMEG00000012100	cpsf2	55	76.039	ENSEBUG00000012098	cpsf2	93	76.039	Eptatretus_burgeri
ENSPMEG00000012100	cpsf2	88	89.683	ENSEASG00005021193	CPSF2	96	90.102	Equus_asinus_asinus
ENSPMEG00000012100	cpsf2	100	85.027	ENSECAG00000023935	CPSF2	96	85.658	Equus_caballus
ENSPMEG00000012100	cpsf2	100	88.742	ENSELUG00000008442	cpsf2	96	89.048	Esox_lucius
ENSPMEG00000012100	cpsf2	100	85.027	ENSFCAG00000007886	CPSF2	96	85.658	Felis_catus
ENSPMEG00000012100	cpsf2	100	84.873	ENSFALG00000002412	CPSF2	96	85.771	Ficedula_albicollis
ENSPMEG00000012100	cpsf2	100	85.027	ENSFDAG00000006327	CPSF2	96	85.658	Fukomys_damarensis
ENSPMEG00000012100	cpsf2	100	96.129	ENSFHEG00000015465	cpsf2	99	96.129	Fundulus_heteroclitus
ENSPMEG00000012100	cpsf2	100	89.481	ENSGMOG00000008761	cpsf2	96	89.895	Gadus_morhua
ENSPMEG00000012100	cpsf2	100	85.141	ENSGALG00000010783	CPSF2	96	85.771	Gallus_gallus
ENSPMEG00000012100	cpsf2	100	99.196	ENSGAFG00000001407	cpsf2	96	99.339	Gambusia_affinis
ENSPMEG00000012100	cpsf2	100	94.370	ENSGACG00000008418	cpsf2	100	93.533	Gasterosteus_aculeatus
ENSPMEG00000012100	cpsf2	100	84.759	ENSGAGG00000008287	CPSF2	99	85.564	Gopherus_agassizii
ENSPMEG00000012100	cpsf2	100	85.027	ENSGGOG00000011799	CPSF2	96	85.658	Gorilla_gorilla
ENSPMEG00000012100	cpsf2	99	93.423	ENSHBUG00000023466	cpsf2	96	93.527	Haplochromis_burtoni
ENSPMEG00000012100	cpsf2	100	85.160	ENSHGLG00000018311	CPSF2	96	85.789	Heterocephalus_glaber_female
ENSPMEG00000012100	cpsf2	100	85.160	ENSHGLG00100016460	CPSF2	96	85.789	Heterocephalus_glaber_male
ENSPMEG00000012100	cpsf2	100	92.761	ENSHCOG00000019527	cpsf2	95	92.876	Hippocampus_comes
ENSPMEG00000012100	cpsf2	100	89.037	ENSIPUG00000020857	cpsf2	96	89.605	Ictalurus_punctatus
ENSPMEG00000012100	cpsf2	100	85.294	ENSSTOG00000009528	CPSF2	96	85.921	Ictidomys_tridecemlineatus
ENSPMEG00000012100	cpsf2	100	85.027	ENSJJAG00000017925	Cpsf2	96	85.658	Jaculus_jaculus
ENSPMEG00000012100	cpsf2	100	95.174	ENSKMAG00000019429	cpsf2	96	95.119	Kryptolebias_marmoratus
ENSPMEG00000012100	cpsf2	100	93.968	ENSLBEG00000011585	cpsf2	100	93.968	Labrus_bergylta
ENSPMEG00000012100	cpsf2	100	82.731	ENSLACG00000019024	CPSF2	96	84.079	Latimeria_chalumnae
ENSPMEG00000012100	cpsf2	100	88.251	ENSLOCG00000014102	cpsf2	96	88.568	Lepisosteus_oculatus
ENSPMEG00000012100	cpsf2	100	84.533	ENSLAFG00000004891	CPSF2	96	85.171	Loxodonta_africana
ENSPMEG00000012100	cpsf2	100	85.160	ENSMFAG00000041212	CPSF2	96	85.789	Macaca_fascicularis
ENSPMEG00000012100	cpsf2	100	85.160	ENSMMUG00000000699	CPSF2	96	85.789	Macaca_mulatta
ENSPMEG00000012100	cpsf2	100	85.160	ENSMNEG00000031584	CPSF2	96	85.789	Macaca_nemestrina
ENSPMEG00000012100	cpsf2	100	85.160	ENSMLEG00000029394	CPSF2	96	85.789	Mandrillus_leucophaeus
ENSPMEG00000012100	cpsf2	100	95.174	ENSMAMG00000004235	cpsf2	96	95.383	Mastacembelus_armatus
ENSPMEG00000012100	cpsf2	99	93.557	ENSMZEG00005001769	cpsf2	96	93.659	Maylandia_zebra
ENSPMEG00000012100	cpsf2	100	84.893	ENSMGAG00000013122	CPSF2	96	85.526	Meleagris_gallopavo
ENSPMEG00000012100	cpsf2	100	84.893	ENSMAUG00000015160	Cpsf2	96	85.526	Mesocricetus_auratus
ENSPMEG00000012100	cpsf2	100	85.160	ENSMICG00000016441	CPSF2	96	85.789	Microcebus_murinus
ENSPMEG00000012100	cpsf2	100	84.626	ENSMOCG00000015372	Cpsf2	96	85.263	Microtus_ochrogaster
ENSPMEG00000012100	cpsf2	100	88.338	ENSMMOG00000015590	cpsf2	92	93.268	Mola_mola
ENSPMEG00000012100	cpsf2	100	85.160	ENSMODG00000002042	CPSF2	96	85.789	Monodelphis_domestica
ENSPMEG00000012100	cpsf2	100	91.153	ENSMALG00000022275	cpsf2	96	91.413	Monopterus_albus
ENSPMEG00000012100	cpsf2	100	84.893	ENSMUSG00000041781	Cpsf2	96	85.526	Mus_musculus
ENSPMEG00000012100	cpsf2	100	84.759	MGP_PahariEiJ_G0029791	Cpsf2	96	85.395	Mus_pahari
ENSPMEG00000012100	cpsf2	100	84.893	MGP_SPRETEiJ_G0018877	Cpsf2	96	85.526	Mus_spretus
ENSPMEG00000012100	cpsf2	100	85.160	ENSMPUG00000007617	CPSF2	94	85.789	Mustela_putorius_furo
ENSPMEG00000012100	cpsf2	100	84.626	ENSMLUG00000005570	CPSF2	96	85.263	Myotis_lucifugus
ENSPMEG00000012100	cpsf2	100	84.893	ENSNGAG00000020312	Cpsf2	96	85.526	Nannospalax_galili
ENSPMEG00000012100	cpsf2	99	93.960	ENSNBRG00000022402	cpsf2	96	93.931	Neolamprologus_brichardi
ENSPMEG00000012100	cpsf2	100	84.492	ENSNLEG00000017132	CPSF2	96	85.132	Nomascus_leucogenys
ENSPMEG00000012100	cpsf2	91	92.937	ENSMEUG00000008138	CPSF2	87	92.880	Notamacropus_eugenii
ENSPMEG00000012100	cpsf2	99	81.165	ENSOPRG00000008484	-	100	81.165	Ochotona_princeps
ENSPMEG00000012100	cpsf2	100	84.893	ENSODEG00000008682	CPSF2	96	85.526	Octodon_degus
ENSPMEG00000012100	cpsf2	100	93.566	ENSONIG00000005901	cpsf2	96	93.668	Oreochromis_niloticus
ENSPMEG00000012100	cpsf2	100	84.759	ENSOANG00000003822	CPSF2	96	85.395	Ornithorhynchus_anatinus
ENSPMEG00000012100	cpsf2	100	85.027	ENSOCUG00000005713	CPSF2	96	85.658	Oryctolagus_cuniculus
ENSPMEG00000012100	cpsf2	99	88.522	ENSORLG00000011628	cpsf2	95	93.172	Oryzias_latipes
ENSPMEG00000012100	cpsf2	100	94.638	ENSORLG00020016980	cpsf2	96	94.591	Oryzias_latipes_hni
ENSPMEG00000012100	cpsf2	100	94.638	ENSORLG00015011910	cpsf2	96	94.591	Oryzias_latipes_hsok
ENSPMEG00000012100	cpsf2	100	94.511	ENSOMEG00000022876	cpsf2	96	94.730	Oryzias_melastigma
ENSPMEG00000012100	cpsf2	100	82.000	ENSOARG00000012889	CPSF2	96	82.677	Ovis_aries
ENSPMEG00000012100	cpsf2	100	85.027	ENSPPAG00000039666	CPSF2	96	85.658	Pan_paniscus
ENSPMEG00000012100	cpsf2	100	85.027	ENSPPRG00000010869	CPSF2	96	85.639	Panthera_pardus
ENSPMEG00000012100	cpsf2	100	85.027	ENSPTIG00000021202	CPSF2	96	85.658	Panthera_tigris_altaica
ENSPMEG00000012100	cpsf2	100	85.027	ENSPTRG00000006651	CPSF2	96	85.658	Pan_troglodytes
ENSPMEG00000012100	cpsf2	100	85.160	ENSPANG00000017417	CPSF2	96	85.789	Papio_anubis
ENSPMEG00000012100	cpsf2	99	85.132	ENSPKIG00000021453	cpsf2	95	89.474	Paramormyrops_kingsleyae
ENSPMEG00000012100	cpsf2	100	84.358	ENSPSIG00000006289	CPSF2	96	85.132	Pelodiscus_sinensis
ENSPMEG00000012100	cpsf2	80	86.855	ENSPMGG00000002511	cpsf2	99	88.000	Periophthalmus_magnuspinnatus
ENSPMEG00000012100	cpsf2	100	85.027	ENSPEMG00000007917	Cpsf2	96	85.658	Peromyscus_maniculatus_bairdii
ENSPMEG00000012100	cpsf2	99	72.266	ENSPMAG00000006205	cpsf2	96	72.539	Petromyzon_marinus
ENSPMEG00000012100	cpsf2	100	85.160	ENSPCIG00000011393	CPSF2	94	90.097	Phascolarctos_cinereus
ENSPMEG00000012100	cpsf2	100	99.732	ENSPFOG00000018648	cpsf2	96	99.868	Poecilia_formosa
ENSPMEG00000012100	cpsf2	100	99.732	ENSPLAG00000019199	cpsf2	96	99.868	Poecilia_latipinna
ENSPMEG00000012100	cpsf2	100	98.928	ENSPREG00000008960	cpsf2	96	99.075	Poecilia_reticulata
ENSPMEG00000012100	cpsf2	67	81.511	ENSPPYG00000029685	-	100	81.511	Pongo_abelii
ENSPMEG00000012100	cpsf2	100	84.759	ENSPCAG00000012477	CPSF2	96	85.395	Procavia_capensis
ENSPMEG00000012100	cpsf2	100	85.294	ENSPCOG00000026387	CPSF2	96	85.921	Propithecus_coquereli
ENSPMEG00000012100	cpsf2	63	90.385	ENSPVAG00000004223	CPSF2	61	90.816	Pteropus_vampyrus
ENSPMEG00000012100	cpsf2	99	93.164	ENSPNYG00000023356	cpsf2	96	93.272	Pundamilia_nyererei
ENSPMEG00000012100	cpsf2	100	89.973	ENSPNAG00000001849	cpsf2	96	90.526	Pygocentrus_nattereri
ENSPMEG00000012100	cpsf2	100	84.893	ENSRNOG00000005733	Cpsf2	96	85.526	Rattus_norvegicus
ENSPMEG00000012100	cpsf2	100	85.160	ENSRBIG00000044792	CPSF2	96	85.789	Rhinopithecus_bieti
ENSPMEG00000012100	cpsf2	100	85.160	ENSRROG00000034875	CPSF2	96	85.789	Rhinopithecus_roxellana
ENSPMEG00000012100	cpsf2	100	85.294	ENSSBOG00000024571	CPSF2	96	85.921	Saimiri_boliviensis_boliviensis
ENSPMEG00000012100	cpsf2	100	85.294	ENSSHAG00000010458	CPSF2	96	85.921	Sarcophilus_harrisii
ENSPMEG00000012100	cpsf2	100	89.973	ENSSFOG00015002117	cpsf2	96	90.658	Scleropages_formosus
ENSPMEG00000012100	cpsf2	100	93.173	ENSSMAG00000002001	cpsf2	96	94.459	Scophthalmus_maximus
ENSPMEG00000012100	cpsf2	100	95.308	ENSSDUG00000004084	cpsf2	96	95.641	Seriola_dumerili
ENSPMEG00000012100	cpsf2	100	94.906	ENSSLDG00000024330	cpsf2	96	95.244	Seriola_lalandi_dorsalis
ENSPMEG00000012100	cpsf2	59	93.069	ENSSARG00000009784	-	63	93.069	Sorex_araneus
ENSPMEG00000012100	cpsf2	100	84.759	ENSSPUG00000013485	CPSF2	96	85.395	Sphenodon_punctatus
ENSPMEG00000012100	cpsf2	100	95.040	ENSSPAG00000013284	cpsf2	96	95.251	Stegastes_partitus
ENSPMEG00000012100	cpsf2	100	85.027	ENSSSCG00000002447	CPSF2	96	85.658	Sus_scrofa
ENSPMEG00000012100	cpsf2	100	85.007	ENSTGUG00000012571	-	96	85.771	Taeniopygia_guttata
ENSPMEG00000012100	cpsf2	100	92.091	ENSTRUG00000003742	cpsf2	96	92.602	Takifugu_rubripes
ENSPMEG00000012100	cpsf2	100	90.775	ENSTNIG00000012228	cpsf2	96	92.368	Tetraodon_nigroviridis
ENSPMEG00000012100	cpsf2	91	82.769	ENSTBEG00000004530	CPSF2	90	83.333	Tupaia_belangeri
ENSPMEG00000012100	cpsf2	87	87.500	ENSTTRG00000008697	CPSF2	85	87.500	Tursiops_truncatus
ENSPMEG00000012100	cpsf2	100	85.160	ENSUAMG00000028071	CPSF2	96	85.789	Ursus_americanus
ENSPMEG00000012100	cpsf2	100	85.160	ENSUMAG00000005029	CPSF2	96	89.855	Ursus_maritimus
ENSPMEG00000012100	cpsf2	99	85.658	ENSVPAG00000003503	CPSF2	96	85.658	Vicugna_pacos
ENSPMEG00000012100	cpsf2	100	85.027	ENSVVUG00000024642	CPSF2	96	85.658	Vulpes_vulpes
ENSPMEG00000012100	cpsf2	100	83.824	ENSXETG00000010289	cpsf2	96	84.079	Xenopus_tropicalis
ENSPMEG00000012100	cpsf2	100	98.525	ENSXCOG00000001764	cpsf2	96	98.679	Xiphophorus_couchianus
ENSPMEG00000012100	cpsf2	100	99.196	ENSXMAG00000017048	cpsf2	96	99.339	Xiphophorus_maculatus