EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000012169 (Gene tree)
Gene ID: 106931430
Gene Symbol: srprb
Alias: -
Full Name: SRP receptor subunit beta
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 6103 bases
Position: chrKQ552349.1:70454-76556
Accession: 106931430
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000010226	MMR_HSR1	PF01926.23	3.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000030906	-	4286	XM_015009562	ENSPMEP00000010226	258 (aa)	XP_014865048	UPI00072E4497

Gene Model

Click here to download ENSPMEG00000012169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000012169's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000012169	srprb	73	30.319	ENSPMEG00000012201	-	96	30.319
ENSPMEG00000012169	srprb	73	30.319	ENSPMEG00000020422	arf3b	96	30.319
ENSPMEG00000012169	srprb	62	31.250	ENSPMEG00000022942	arf2b	83	31.250
ENSPMEG00000012169	srprb	66	30.994	ENSPMEG00000024077	-	88	30.994
ENSPMEG00000012169	srprb	62	30.625	ENSPMEG00000009906	-	84	30.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000012169	srprb	100	88.372	ENSAPOG00000021219	srprb	93	88.372	Acanthochromis_polyacanthus
ENSPMEG00000012169	srprb	99	87.843	ENSACIG00000014621	srprb	96	87.843	Amphilophus_citrinellus
ENSPMEG00000012169	srprb	100	86.822	ENSAOCG00000017265	srprb	93	86.822	Amphiprion_ocellaris
ENSPMEG00000012169	srprb	100	86.822	ENSAPEG00000024541	srprb	82	86.822	Amphiprion_percula
ENSPMEG00000012169	srprb	99	87.059	ENSATEG00000014016	srprb	93	87.059	Anabas_testudineus
ENSPMEG00000012169	srprb	100	87.645	ENSACLG00000016748	srprb	94	87.645	Astatotilapia_calliptera
ENSPMEG00000012169	srprb	98	71.825	ENSAMXG00000044118	srprb	95	71.825	Astyanax_mexicanus
ENSPMEG00000012169	srprb	100	82.946	ENSCSEG00000017194	srprb	94	82.946	Cynoglossus_semilaevis
ENSPMEG00000012169	srprb	100	90.698	ENSCVAG00000004221	srprb	97	90.698	Cyprinodon_variegatus
ENSPMEG00000012169	srprb	98	69.841	ENSDARG00000030949	srprb	95	69.841	Danio_rerio
ENSPMEG00000012169	srprb	98	80.632	ENSELUG00000009740	srprb	93	80.632	Esox_lucius
ENSPMEG00000012169	srprb	100	92.248	ENSFHEG00000006004	srprb	97	92.248	Fundulus_heteroclitus
ENSPMEG00000012169	srprb	98	84.524	ENSGMOG00000002081	srprb	93	84.524	Gadus_morhua
ENSPMEG00000012169	srprb	100	96.899	ENSGAFG00000012593	srprb	97	96.899	Gambusia_affinis
ENSPMEG00000012169	srprb	100	86.047	ENSGACG00000009891	srprb	95	86.047	Gasterosteus_aculeatus
ENSPMEG00000012169	srprb	100	87.645	ENSHBUG00000002145	srprb	94	87.645	Haplochromis_burtoni
ENSPMEG00000012169	srprb	98	84.524	ENSHCOG00000007732	srprb	94	84.524	Hippocampus_comes
ENSPMEG00000012169	srprb	98	67.063	ENSIPUG00000004177	srprb	94	67.063	Ictalurus_punctatus
ENSPMEG00000012169	srprb	100	86.434	ENSKMAG00000020736	srprb	97	86.434	Kryptolebias_marmoratus
ENSPMEG00000012169	srprb	99	87.109	ENSLBEG00000021483	srprb	93	87.109	Labrus_bergylta
ENSPMEG00000012169	srprb	100	70.270	ENSLOCG00000009740	srprb	87	68.726	Lepisosteus_oculatus
ENSPMEG00000012169	srprb	100	87.597	ENSMAMG00000011876	srprb	94	87.597	Mastacembelus_armatus
ENSPMEG00000012169	srprb	100	86.873	ENSMZEG00005016621	srprb	100	86.873	Maylandia_zebra
ENSPMEG00000012169	srprb	100	86.822	ENSMMOG00000012550	srprb	95	86.822	Mola_mola
ENSPMEG00000012169	srprb	100	86.434	ENSMALG00000012595	srprb	94	86.434	Monopterus_albus
ENSPMEG00000012169	srprb	73	87.302	ENSNBRG00000004699	srprb	88	80.861	Neolamprologus_brichardi
ENSPMEG00000012169	srprb	100	87.597	ENSONIG00000003788	srprb	77	87.597	Oreochromis_niloticus
ENSPMEG00000012169	srprb	100	81.008	ENSORLG00000006430	srprb	94	81.008	Oryzias_latipes
ENSPMEG00000012169	srprb	100	81.395	ENSORLG00020003413	srprb	94	81.395	Oryzias_latipes_hni
ENSPMEG00000012169	srprb	100	81.395	ENSORLG00015000166	srprb	94	81.395	Oryzias_latipes_hsok
ENSPMEG00000012169	srprb	100	82.946	ENSOMEG00000012735	srprb	94	82.946	Oryzias_melastigma
ENSPMEG00000012169	srprb	97	70.518	ENSPKIG00000013147	srprb	95	70.518	Paramormyrops_kingsleyae
ENSPMEG00000012169	srprb	98	82.143	ENSPMGG00000014061	srprb	92	82.143	Periophthalmus_magnuspinnatus
ENSPMEG00000012169	srprb	100	99.612	ENSPFOG00000011347	srprb	93	99.612	Poecilia_formosa
ENSPMEG00000012169	srprb	100	98.450	ENSPLAG00000001156	srprb	100	98.450	Poecilia_latipinna
ENSPMEG00000012169	srprb	100	98.062	ENSPREG00000001449	srprb	100	98.062	Poecilia_reticulata
ENSPMEG00000012169	srprb	100	87.645	ENSPNYG00000005911	srprb	94	87.645	Pundamilia_nyererei
ENSPMEG00000012169	srprb	98	71.825	ENSPNAG00000009983	srprb	95	71.825	Pygocentrus_nattereri
ENSPMEG00000012169	srprb	98	74.016	ENSSFOG00015019355	srprb	95	74.016	Scleropages_formosus
ENSPMEG00000012169	srprb	100	85.659	ENSSMAG00000013202	srprb	94	85.659	Scophthalmus_maximus
ENSPMEG00000012169	srprb	100	87.209	ENSSDUG00000018746	srprb	88	87.209	Seriola_dumerili
ENSPMEG00000012169	srprb	100	87.597	ENSSLDG00000020560	srprb	94	87.597	Seriola_lalandi_dorsalis
ENSPMEG00000012169	srprb	100	87.597	ENSSPAG00000008898	srprb	93	87.597	Stegastes_partitus
ENSPMEG00000012169	srprb	100	85.271	ENSTRUG00000022463	srprb	94	85.271	Takifugu_rubripes
ENSPMEG00000012169	srprb	99	82.031	ENSTNIG00000007725	srprb	98	82.031	Tetraodon_nigroviridis
ENSPMEG00000012169	srprb	100	96.899	ENSXCOG00000012585	srprb	100	96.899	Xiphophorus_couchianus
ENSPMEG00000012169	srprb	100	96.512	ENSXMAG00000028725	srprb	100	96.512	Xiphophorus_maculatus