EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000012205 (Gene tree)
Gene ID: 106924152
Gene Symbol: rab4a
Alias: -
Full Name: RAB4A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 7649 bases
Position: chrKQ551660.1:193028-200676
Accession: 106924152
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000027650	MMR_HSR1	PF01926.23	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000030922	-	2112	XM_014997711	ENSPMEP00000027650	213 (aa)	XP_014853197	UPI000293A040

Gene Model

Click here to download ENSPMEG00000012205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000012205's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000012205	rab4a	81	33.146	ENSPMEG00000019525	KRAS	93	33.146
ENSPMEG00000012205	rab4a	80	53.801	ENSPMEG00000007917	rab11ba	58	53.801
ENSPMEG00000012205	rab4a	68	42.000	ENSPMEG00000019646	-	63	42.000
ENSPMEG00000012205	rab4a	60	30.303	ENSPMEG00000018380	rras2	79	30.303
ENSPMEG00000012205	rab4a	99	59.048	ENSPMEG00000010857	rab14	97	59.048
ENSPMEG00000012205	rab4a	78	44.048	ENSPMEG00000002564	-	69	44.048
ENSPMEG00000012205	rab4a	82	38.286	ENSPMEG00000014170	rab41	83	38.286
ENSPMEG00000012205	rab4a	83	48.295	ENSPMEG00000005491	rab25a	83	48.295
ENSPMEG00000012205	rab4a	77	36.095	ENSPMEG00000010190	RAB9A	77	36.095
ENSPMEG00000012205	rab4a	81	32.386	ENSPMEG00000020579	rhebl1	92	32.386
ENSPMEG00000012205	rab4a	86	44.022	ENSPMEG00000013085	rab18a	89	44.022
ENSPMEG00000012205	rab4a	81	33.526	ENSPMEG00000000572	rras	87	33.526
ENSPMEG00000012205	rab4a	89	35.938	ENSPMEG00000019497	rab42a	88	35.938
ENSPMEG00000012205	rab4a	56	33.607	ENSPMEG00000000631	arl5c	66	33.607
ENSPMEG00000012205	rab4a	81	45.349	ENSPMEG00000008020	-	86	45.349
ENSPMEG00000012205	rab4a	80	54.386	ENSPMEG00000012389	rab11bb	78	56.250
ENSPMEG00000012205	rab4a	82	38.857	ENSPMEG00000021872	rab6bb	84	38.857
ENSPMEG00000012205	rab4a	83	34.254	ENSPMEG00000019159	si:dkey-13a21.4	88	34.254
ENSPMEG00000012205	rab4a	79	40.237	ENSPMEG00000007165	si:dkey-16l2.16	80	40.237
ENSPMEG00000012205	rab4a	81	46.243	ENSPMEG00000022350	zgc:171927	84	46.243
ENSPMEG00000012205	rab4a	83	45.763	ENSPMEG00000009701	rab30	87	45.763
ENSPMEG00000012205	rab4a	74	41.139	ENSPMEG00000019167	rab6ba	76	41.139
ENSPMEG00000012205	rab4a	72	35.065	ENSPMEG00000017300	rab23	78	34.783
ENSPMEG00000012205	rab4a	77	36.310	ENSPMEG00000023735	rab9a	83	36.310
ENSPMEG00000012205	rab4a	84	37.705	ENSPMEG00000021641	-	88	37.705
ENSPMEG00000012205	rab4a	75	37.805	ENSPMEG00000003177	rab33a	58	37.805
ENSPMEG00000012205	rab4a	76	34.857	ENSPMEG00000022709	rab33ba	72	34.857
ENSPMEG00000012205	rab4a	79	40.828	ENSPMEG00000010417	rab12	69	40.828
ENSPMEG00000012205	rab4a	76	43.478	ENSPMEG00000007238	rab5aa	75	43.478
ENSPMEG00000012205	rab4a	99	58.571	ENSPMEG00000006424	-	97	58.571
ENSPMEG00000012205	rab4a	80	40.588	ENSPMEG00000021986	rab15	80	40.588
ENSPMEG00000012205	rab4a	80	54.386	ENSPMEG00000007842	-	77	54.386
ENSPMEG00000012205	rab4a	80	35.227	ENSPMEG00000018256	dnajc27	64	35.227
ENSPMEG00000012205	rab4a	83	47.159	ENSPMEG00000002054	rab1ba	88	47.159
ENSPMEG00000012205	rab4a	74	35.625	ENSPMEG00000002086	rab34a	60	35.625
ENSPMEG00000012205	rab4a	76	43.478	ENSPMEG00000012614	-	72	43.478
ENSPMEG00000012205	rab4a	97	31.754	ENSPMEG00000010152	zgc:101559	85	31.754
ENSPMEG00000012205	rab4a	83	47.727	ENSPMEG00000001400	rab25b	84	47.727
ENSPMEG00000012205	rab4a	76	40.373	ENSPMEG00000003743	rab22a	83	40.373
ENSPMEG00000012205	rab4a	76	33.333	ENSPMEG00000020891	hrasb	85	33.333
ENSPMEG00000012205	rab4a	77	38.372	ENSPMEG00000024399	rab9b	76	38.372
ENSPMEG00000012205	rab4a	69	34.641	ENSPMEG00000015292	rab36	85	34.641
ENSPMEG00000012205	rab4a	96	47.059	ENSPMEG00000007932	rab11a	94	47.059
ENSPMEG00000012205	rab4a	100	42.254	ENSPMEG00000005288	-	99	42.254
ENSPMEG00000012205	rab4a	76	43.478	ENSPMEG00000011336	rab5c	78	41.860
ENSPMEG00000012205	rab4a	76	43.210	ENSPMEG00000021947	rab35b	80	43.210
ENSPMEG00000012205	rab4a	78	40.936	ENSPMEG00000003369	rab6a	82	40.936
ENSPMEG00000012205	rab4a	100	40.000	ENSPMEG00000004946	RAB39B	100	40.000
ENSPMEG00000012205	rab4a	86	38.298	ENSPMEG00000012932	si:dkey-34d22.5	85	38.298
ENSPMEG00000012205	rab4a	75	55.000	ENSPMEG00000000804	rab11al	74	55.000
ENSPMEG00000012205	rab4a	72	30.519	ENSPMEG00000014302	rheb	84	30.519
ENSPMEG00000012205	rab4a	89	43.455	ENSPMEG00000008223	rab18b	92	43.455
ENSPMEG00000012205	rab4a	80	32.749	ENSPMEG00000004703	rabl2	74	32.749
ENSPMEG00000012205	rab4a	78	44.048	ENSPMEG00000017161	-	69	44.048
ENSPMEG00000012205	rab4a	83	34.078	ENSPMEG00000013297	rab34b	70	34.078
ENSPMEG00000012205	rab4a	83	34.225	ENSPMEG00000021807	RAB29	87	34.225
ENSPMEG00000012205	rab4a	77	38.372	ENSPMEG00000013734	rab9b	76	38.372
ENSPMEG00000012205	rab4a	54	31.092	ENSPMEG00000022283	arl8	63	31.092
ENSPMEG00000012205	rab4a	81	45.349	ENSPMEG00000022988	-	86	45.349
ENSPMEG00000012205	rab4a	75	35.152	ENSPMEG00000011210	si:cabz01085950.1	81	35.152
ENSPMEG00000012205	rab4a	54	33.333	ENSPMEG00000017927	RRAS2	82	33.333
ENSPMEG00000012205	rab4a	89	42.188	ENSPMEG00000007976	-	90	42.188
ENSPMEG00000012205	rab4a	100	36.986	ENSPMEG00000000408	RAB15	100	36.986
ENSPMEG00000012205	rab4a	84	37.158	ENSPMEG00000004392	RAB7A	88	37.158
ENSPMEG00000012205	rab4a	83	46.591	ENSPMEG00000003046	rab1ab	87	46.591
ENSPMEG00000012205	rab4a	54	33.333	ENSPMEG00000010573	-	82	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000012205	rab4a	100	98.592	ENSCVAG00000010727	rab4a	100	98.592	Cyprinodon_variegatus
ENSPMEG00000012205	rab4a	100	94.366	ENSELUG00000014785	rab4a	100	94.366	Esox_lucius
ENSPMEG00000012205	rab4a	100	99.061	ENSFHEG00000010509	rab4a	100	99.061	Fundulus_heteroclitus
ENSPMEG00000012205	rab4a	100	100.000	ENSGAFG00000005477	rab4a	100	100.000	Gambusia_affinis
ENSPMEG00000012205	rab4a	100	97.196	ENSGACG00000016164	rab4a	98	97.196	Gasterosteus_aculeatus
ENSPMEG00000012205	rab4a	100	99.061	ENSKMAG00000020250	rab4a	100	99.061	Kryptolebias_marmoratus
ENSPMEG00000012205	rab4a	100	98.122	ENSLBEG00000003101	rab4a	100	98.122	Labrus_bergylta
ENSPMEG00000012205	rab4a	100	96.714	ENSMMOG00000015287	rab4a	100	96.714	Mola_mola
ENSPMEG00000012205	rab4a	100	100.000	ENSPFOG00000014630	rab4a	100	100.000	Poecilia_formosa
ENSPMEG00000012205	rab4a	100	100.000	ENSPLAG00000014563	rab4a	100	100.000	Poecilia_latipinna
ENSPMEG00000012205	rab4a	100	100.000	ENSPREG00000010154	rab4a	100	100.000	Poecilia_reticulata
ENSPMEG00000012205	rab4a	100	94.366	ENSSFOG00015015336	rab4a	100	94.366	Scleropages_formosus
ENSPMEG00000012205	rab4a	100	100.000	ENSXMAG00000026193	rab4a	100	100.000	Xiphophorus_maculatus