EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPMEG00000012216 (Gene tree)
Gene ID
106930022
Gene Symbol
trnt1
Alias
-
Full Name
tRNA nucleotidyl transferase 1
Gene Type
protein_coding
Species
Poecilia_mexicana
Status
putative
Strand
Minus strand
Length
16975 bases
Position
chrKQ552177.1:89791-106765
Accession
106930022
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMEP00000010268PolyA_polPF01743.204.4e-3411
ENSPMEP00000010280PolyA_polPF01743.204.7e-3411
ENSPMEP00000027665PolyA_polPF01743.204.7e-3411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMET00000030935-1711XM_015007324ENSPMEP00000027665427 (aa)XP_014862810UPI00072E6478
ENSPMET00000017088-2340XM_015007323ENSPMEP00000010280425 (aa)XP_014862809UPI00072E4C34
ENSPMET00000017072-2201XM_015007326ENSPMEP00000010268404 (aa)XP_014862812UPI00072ED354
Gene Model
Click here to download ENSPMEG00000012216's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000012216's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMEG00000012216trnt19968.983ENSG00000072756TRNT19667.376Homo_sapiens
ENSPMEG00000012216trnt19984.826ENSAPOG00000013687trnt19983.294Acanthochromis_polyacanthus
ENSPMEG00000012216trnt19967.901ENSAMEG00000014520TRNT19468.137Ailuropoda_melanoleuca
ENSPMEG00000012216trnt19986.352ENSACIG00000021706trnt19984.706Amphilophus_citrinellus
ENSPMEG00000012216trnt19987.345ENSAOCG00000024612trnt19985.681Amphiprion_ocellaris
ENSPMEG00000012216trnt19679.897ENSAPEG00000022627trnt19578.589Amphiprion_percula
ENSPMEG00000012216trnt19987.097ENSATEG00000008928trnt19987.097Anabas_testudineus
ENSPMEG00000012216trnt19571.802ENSAPLG00000004258TRNT19571.802Anas_platyrhynchos
ENSPMEG00000012216trnt19967.742ENSACAG00000005657TRNT19367.482Anolis_carolinensis
ENSPMEG00000012216trnt19968.486ENSANAG00000024802TRNT19468.719Aotus_nancymaae
ENSPMEG00000012216trnt110084.158ENSACLG00000022227trnt110082.436Astatotilapia_calliptera
ENSPMEG00000012216trnt19978.856ENSAMXG00000003960trnt19976.869Astyanax_mexicanus
ENSPMEG00000012216trnt19967.246ENSBTAG00000019534TRNT19665.721Bos_taurus
ENSPMEG00000012216trnt19943.237WBGene00010089hpo-319443.373Caenorhabditis_elegans
ENSPMEG00000012216trnt19968.734ENSCJAG00000015466TRNT19468.966Callithrix_jacchus
ENSPMEG00000012216trnt19968.734ENSCAFG00000005985TRNT19368.966Canis_familiaris
ENSPMEG00000012216trnt19968.734ENSCAFG00020014746TRNT19368.966Canis_lupus_dingo
ENSPMEG00000012216trnt19967.990ENSCHIG00000007030TRNT19566.986Capra_hircus
ENSPMEG00000012216trnt19969.231ENSTSYG00000013390TRNT19469.458Carlito_syrichta
ENSPMEG00000012216trnt19355.053ENSCAPG00000006891TRNT19954.787Cavia_aperea
ENSPMEG00000012216trnt19967.494ENSCPOG00000007849TRNT19665.957Cavia_porcellus
ENSPMEG00000012216trnt19869.192ENSCCAG00000002919TRNT19868.957Cebus_capucinus
ENSPMEG00000012216trnt19969.479ENSCATG00000031985TRNT19269.704Cercocebus_atys
ENSPMEG00000012216trnt19967.990ENSCLAG00000005186TRNT18479.330Chinchilla_lanigera
ENSPMEG00000012216trnt19969.479ENSCSAG00000011052TRNT19469.704Chlorocebus_sabaeus
ENSPMEG00000012216trnt18378.613ENSCHOG00000005712TRNT17878.977Choloepus_hoffmanni
ENSPMEG00000012216trnt19970.223ENSCPBG00000017636TRNT19370.098Chrysemys_picta_bellii
ENSPMEG00000012216trnt19940.741ENSCING00000007069-9940.741Ciona_intestinalis
ENSPMEG00000012216trnt19941.626ENSCSAVG00000007494-9541.626Ciona_savignyi
ENSPMEG00000012216trnt19969.727ENSCANG00000039030TRNT19469.951Colobus_angolensis_palliatus
ENSPMEG00000012216trnt19968.734ENSCGRG00001009998Trnt19469.118Cricetulus_griseus_chok1gshd
ENSPMEG00000012216trnt19968.734ENSCGRG00000013410Trnt18679.121Cricetulus_griseus_crigri
ENSPMEG00000012216trnt110081.436ENSCSEG00000008157trnt110079.812Cynoglossus_semilaevis
ENSPMEG00000012216trnt19989.330ENSCVAG00000019770trnt19988.095Cyprinodon_variegatus
ENSPMEG00000012216trnt19980.500ENSDARG00000075297trnt19977.934Danio_rerio
ENSPMEG00000012216trnt19970.223ENSDNOG00000008837TRNT19470.098Dasypus_novemcinctus
ENSPMEG00000012216trnt19968.734ENSDORG00000014035Trnt19468.627Dipodomys_ordii
ENSPMEG00000012216trnt19949.010FBgn0037369CG21008349.010Drosophila_melanogaster
ENSPMEG00000012216trnt15973.529ENSETEG00000018177TRNT19773.859Echinops_telfairi
ENSPMEG00000012216trnt19964.677ENSEBUG00000012779-9962.648Eptatretus_burgeri
ENSPMEG00000012216trnt19969.727ENSEASG00005003577TRNT19469.951Equus_asinus_asinus
ENSPMEG00000012216trnt19969.975ENSECAG00000014420TRNT19470.197Equus_caballus
ENSPMEG00000012216trnt19968.734ENSEEUG00000009567TRNT19767.139Erinaceus_europaeus
ENSPMEG00000012216trnt19981.841ENSELUG00000003802trnt19979.481Esox_lucius
ENSPMEG00000012216trnt19968.486ENSFCAG00000026805TRNT19368.719Felis_catus
ENSPMEG00000012216trnt19571.540ENSFALG00000013539TRNT19971.540Ficedula_albicollis
ENSPMEG00000012216trnt19967.494ENSFDAG00000018412TRNT19665.957Fukomys_damarensis
ENSPMEG00000012216trnt19988.834ENSFHEG00000019294trnt19988.443Fundulus_heteroclitus
ENSPMEG00000012216trnt19981.343ENSGMOG00000007460trnt110078.873Gadus_morhua
ENSPMEG00000012216trnt19969.231ENSGALG00000017368TRNT19767.221Gallus_gallus
ENSPMEG00000012216trnt110096.287ENSGAFG00000008647trnt110096.235Gambusia_affinis
ENSPMEG00000012216trnt19983.871ENSGACG00000011903trnt19982.629Gasterosteus_aculeatus
ENSPMEG00000012216trnt19971.464ENSGAGG00000020942TRNT19371.324Gopherus_agassizii
ENSPMEG00000012216trnt19969.231ENSGGOG00000015286TRNT19469.458Gorilla_gorilla
ENSPMEG00000012216trnt110084.406ENSHBUG00000002797trnt110082.670Haplochromis_burtoni
ENSPMEG00000012216trnt19963.524ENSHGLG00000000221-9661.792Heterocephalus_glaber_female
ENSPMEG00000012216trnt19967.494ENSHGLG00000003649TRNT19467.647Heterocephalus_glaber_female
ENSPMEG00000012216trnt19966.501ENSHGLG00100016421TRNT19466.667Heterocephalus_glaber_male
ENSPMEG00000012216trnt19977.667ENSHCOG00000010618trnt19976.303Hippocampus_comes
ENSPMEG00000012216trnt19979.104ENSIPUG00000000971trnt19976.636Ictalurus_punctatus
ENSPMEG00000012216trnt19969.231ENSSTOG00000000150TRNT18679.330Ictidomys_tridecemlineatus
ENSPMEG00000012216trnt19968.486ENSJJAG00000018561Trnt19468.627Jaculus_jaculus
ENSPMEG00000012216trnt110086.634ENSKMAG00000011307trnt110084.742Kryptolebias_marmoratus
ENSPMEG00000012216trnt19678.351ENSLBEG00000019457trnt19777.129Labrus_bergylta
ENSPMEG00000012216trnt19971.393ENSLACG00000013227TRNT19670.602Latimeria_chalumnae
ENSPMEG00000012216trnt19974.690ENSLOCG00000011105trnt19971.528Lepisosteus_oculatus
ENSPMEG00000012216trnt19968.983ENSLAFG00000023191TRNT19469.212Loxodonta_africana
ENSPMEG00000012216trnt19969.479ENSMFAG00000045113TRNT19269.704Macaca_fascicularis
ENSPMEG00000012216trnt19969.479ENSMMUG00000017983TRNT19269.704Macaca_mulatta
ENSPMEG00000012216trnt19969.479ENSMNEG00000037805TRNT19269.704Macaca_nemestrina
ENSPMEG00000012216trnt19570.419ENSMLEG00000033671TRNT19970.419Mandrillus_leucophaeus
ENSPMEG00000012216trnt19985.112ENSMAMG00000023401trnt19983.688Mastacembelus_armatus
ENSPMEG00000012216trnt110084.158ENSMZEG00005009141trnt110082.436Maylandia_zebra
ENSPMEG00000012216trnt17967.085ENSMGAG00000009971TRNT19967.085Meleagris_gallopavo
ENSPMEG00000012216trnt19968.734ENSMAUG00000020707Trnt19468.873Mesocricetus_auratus
ENSPMEG00000012216trnt19969.231ENSMICG00000016615TRNT19469.363Microcebus_murinus
ENSPMEG00000012216trnt19968.734ENSMOCG00000004539Trnt19468.873Microtus_ochrogaster
ENSPMEG00000012216trnt19982.382ENSMMOG00000010742trnt19980.189Mola_mola
ENSPMEG00000012216trnt19968.734ENSMODG00000004368TRNT19468.627Monodelphis_domestica
ENSPMEG00000012216trnt19981.886ENSMALG00000008376trnt19980.282Monopterus_albus
ENSPMEG00000012216trnt19968.734MGP_CAROLIEiJ_G0028698Trnt19074.590Mus_caroli
ENSPMEG00000012216trnt19968.486ENSMUSG00000013736Trnt18380.447Mus_musculus
ENSPMEG00000012216trnt19969.975MGP_PahariEiJ_G0022449Trnt18881.564Mus_pahari
ENSPMEG00000012216trnt19968.734MGP_SPRETEiJ_G0029726Trnt18380.447Mus_spretus
ENSPMEG00000012216trnt19968.238ENSMPUG00000017017TRNT19368.473Mustela_putorius_furo
ENSPMEG00000012216trnt19569.792ENSMLUG00000011864TRNT19969.792Myotis_lucifugus
ENSPMEG00000012216trnt19968.238ENSNGAG00000000537Trnt19468.382Nannospalax_galili
ENSPMEG00000012216trnt18084.520ENSNBRG00000023606trnt19982.370Neolamprologus_brichardi
ENSPMEG00000012216trnt19969.479ENSNLEG00000003226TRNT19469.704Nomascus_leucogenys
ENSPMEG00000012216trnt19968.238ENSMEUG00000004684TRNT19468.137Notamacropus_eugenii
ENSPMEG00000012216trnt19566.230ENSOPRG00000015067TRNT19966.230Ochotona_princeps
ENSPMEG00000012216trnt19968.238ENSODEG00000007597TRNT19965.893Octodon_degus
ENSPMEG00000012216trnt19985.360ENSONIG00000020273trnt19883.568Oreochromis_niloticus
ENSPMEG00000012216trnt19965.509ENSOANG00000007514TRNT19963.466Ornithorhynchus_anatinus
ENSPMEG00000012216trnt19967.246ENSOCUG00000008580TRNT19965.340Oryctolagus_cuniculus
ENSPMEG00000012216trnt110082.426ENSORLG00000003165trnt110079.953Oryzias_latipes
ENSPMEG00000012216trnt110082.921ENSORLG00020022060trnt110080.420Oryzias_latipes_hni
ENSPMEG00000012216trnt110082.673ENSORLG00015018915trnt19980.186Oryzias_latipes_hsok
ENSPMEG00000012216trnt110078.960ENSOMEG00000003331trnt110077.647Oryzias_melastigma
ENSPMEG00000012216trnt19967.990ENSOARG00000008631TRNT19566.986Ovis_aries
ENSPMEG00000012216trnt19968.983ENSPPAG00000043566TRNT19469.212Pan_paniscus
ENSPMEG00000012216trnt19968.238ENSPPRG00000001327TRNT19368.473Panthera_pardus
ENSPMEG00000012216trnt19968.238ENSPTIG00000011448TRNT19368.473Panthera_tigris_altaica
ENSPMEG00000012216trnt19968.983ENSPTRG00000014564TRNT19469.212Pan_troglodytes
ENSPMEG00000012216trnt19969.479ENSPANG00000025944TRNT19269.704Papio_anubis
ENSPMEG00000012216trnt19977.114ENSPKIG00000020015trnt19975.234Paramormyrops_kingsleyae
ENSPMEG00000012216trnt19870.886ENSPSIG00000017356TRNT19971.111Pelodiscus_sinensis
ENSPMEG00000012216trnt19980.149ENSPMGG00000008888trnt19878.638Periophthalmus_magnuspinnatus
ENSPMEG00000012216trnt19968.734ENSPEMG00000019845Trnt19468.873Peromyscus_maniculatus_bairdii
ENSPMEG00000012216trnt19969.479ENSPCIG00000030436TRNT19469.363Phascolarctos_cinereus
ENSPMEG00000012216trnt110099.297ENSPFOG00000006194trnt110099.297Poecilia_formosa
ENSPMEG00000012216trnt110099.257ENSPLAG00000015623trnt110099.257Poecilia_latipinna
ENSPMEG00000012216trnt110098.020ENSPREG00000021470trnt110097.882Poecilia_reticulata
ENSPMEG00000012216trnt19968.734ENSPPYG00000013702TRNT19468.873Pongo_abelii
ENSPMEG00000012216trnt19570.419ENSPCAG00000001951TRNT19970.419Procavia_capensis
ENSPMEG00000012216trnt19968.983ENSPCOG00000022228TRNT19469.212Propithecus_coquereli
ENSPMEG00000012216trnt19569.372ENSPVAG00000008784TRNT19969.372Pteropus_vampyrus
ENSPMEG00000012216trnt110083.911ENSPNYG00000003120trnt110082.201Pundamilia_nyererei
ENSPMEG00000012216trnt19978.856ENSPNAG00000000565trnt19976.869Pygocentrus_nattereri
ENSPMEG00000012216trnt19969.231ENSRNOG00000006432Trnt19469.363Rattus_norvegicus
ENSPMEG00000012216trnt19968.486ENSRBIG00000042632TRNT19368.719Rhinopithecus_bieti
ENSPMEG00000012216trnt19969.479ENSRROG00000036866TRNT19469.704Rhinopithecus_roxellana
ENSPMEG00000012216trnt19968.734ENSSBOG00000021208TRNT19468.966Saimiri_boliviensis_boliviensis
ENSPMEG00000012216trnt19967.990ENSSHAG00000018861TRNT19468.227Sarcophilus_harrisii
ENSPMEG00000012216trnt19977.612ENSSFOG00015020844trnt19974.592Scleropages_formosus
ENSPMEG00000012216trnt19985.608ENSSMAG00000015432trnt19883.568Scophthalmus_maximus
ENSPMEG00000012216trnt19986.104ENSSDUG00000012320trnt110084.272Seriola_dumerili
ENSPMEG00000012216trnt16082.988ENSSLDG00000016463-9183.264Seriola_lalandi_dorsalis
ENSPMEG00000012216trnt19985.856ENSSLDG00000009325trnt110084.038Seriola_lalandi_dorsalis
ENSPMEG00000012216trnt19570.942ENSSPUG00000014153TRNT19970.942Sphenodon_punctatus
ENSPMEG00000012216trnt19984.864ENSSPAG00000021005trnt19983.099Stegastes_partitus
ENSPMEG00000012216trnt19968.486ENSSSCG00000011529TRNT19666.903Sus_scrofa
ENSPMEG00000012216trnt19970.471ENSTGUG00000010192TRNT19970.545Taeniopygia_guttata
ENSPMEG00000012216trnt19982.878ENSTRUG00000001088trnt19980.986Takifugu_rubripes
ENSPMEG00000012216trnt19983.127ENSTNIG00000007363trnt19880.516Tetraodon_nigroviridis
ENSPMEG00000012216trnt15960.504ENSTBEG00000006367TRNT18060.996Tupaia_belangeri
ENSPMEG00000012216trnt19967.494ENSTTRG00000007803TRNT19666.430Tursiops_truncatus
ENSPMEG00000012216trnt19968.486ENSUAMG00000022574TRNT19368.719Ursus_americanus
ENSPMEG00000012216trnt19968.238ENSUMAG00000024092TRNT19368.473Ursus_maritimus
ENSPMEG00000012216trnt19968.734ENSVVUG00000012810TRNT19368.966Vulpes_vulpes
ENSPMEG00000012216trnt19962.935ENSXETG00000025091trnt19962.935Xenopus_tropicalis
ENSPMEG00000012216trnt110095.529ENSXCOG00000010150trnt110095.529Xiphophorus_couchianus
ENSPMEG00000012216trnt110096.471ENSXMAG00000002227trnt110096.471Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us