EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000012356 (Gene tree)
Gene ID: 106924147
Gene Symbol: urb2
Alias: -
Full Name: URB2 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 32483 bases
Position: chrKQ551660.1:122430-154912
Accession: 106924147
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000010407	Urb2	PF10441.9	2.1e-17	1	1
ENSPMEP00000027743	Urb2	PF10441.9	2.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000017234	-	6504	-	ENSPMEP00000027743	1607 (aa)	-	-
ENSPMET00000017244	-	6166	XM_014997703	ENSPMEP00000010407	1577 (aa)	XP_014853189	UPI00072E0FBE

Gene Model

Click here to download ENSPMEG00000012356's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000012356's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000012356	urb2	99	33.890	ENSG00000135763	URB2	96	57.317	Homo_sapiens
ENSPMEG00000012356	urb2	91	62.665	ENSAPOG00000000608	urb2	100	62.599	Acanthochromis_polyacanthus
ENSPMEG00000012356	urb2	100	34.568	ENSAMEG00000009206	URB2	100	34.094	Ailuropoda_melanoleuca
ENSPMEG00000012356	urb2	100	64.346	ENSAOCG00000019961	urb2	100	64.406	Amphiprion_ocellaris
ENSPMEG00000012356	urb2	100	64.346	ENSAPEG00000005263	urb2	100	64.406	Amphiprion_percula
ENSPMEG00000012356	urb2	100	62.500	ENSATEG00000020930	urb2	100	62.500	Anabas_testudineus
ENSPMEG00000012356	urb2	97	35.606	ENSAPLG00000002998	URB2	99	35.094	Anas_platyrhynchos
ENSPMEG00000012356	urb2	99	37.030	ENSACAG00000001285	URB2	99	36.701	Anolis_carolinensis
ENSPMEG00000012356	urb2	99	34.580	ENSANAG00000033963	URB2	99	34.352	Aotus_nancymaae
ENSPMEG00000012356	urb2	91	60.408	ENSACLG00000009254	urb2	100	60.672	Astatotilapia_calliptera
ENSPMEG00000012356	urb2	99	39.479	ENSAMXG00000003474	urb2	99	39.665	Astyanax_mexicanus
ENSPMEG00000012356	urb2	100	35.112	ENSBTAG00000010180	URB2	100	34.699	Bos_taurus
ENSPMEG00000012356	urb2	95	55.705	ENSCJAG00000010968	URB2	99	55.034	Callithrix_jacchus
ENSPMEG00000012356	urb2	99	34.201	ENSCAFG00000012118	URB2	99	33.476	Canis_familiaris
ENSPMEG00000012356	urb2	93	33.066	ENSCAFG00020027217	URB2	98	32.367	Canis_lupus_dingo
ENSPMEG00000012356	urb2	100	34.885	ENSCHIG00000014513	URB2	100	34.783	Capra_hircus
ENSPMEG00000012356	urb2	100	35.192	ENSTSYG00000006924	URB2	100	34.684	Carlito_syrichta
ENSPMEG00000012356	urb2	61	40.223	ENSCPOG00000020777	-	99	40.456	Cavia_porcellus
ENSPMEG00000012356	urb2	99	34.608	ENSCCAG00000023932	URB2	99	34.273	Cebus_capucinus
ENSPMEG00000012356	urb2	99	34.152	ENSCATG00000043366	URB2	99	34.272	Cercocebus_atys
ENSPMEG00000012356	urb2	99	34.680	ENSCLAG00000006268	URB2	99	34.423	Chinchilla_lanigera
ENSPMEG00000012356	urb2	99	33.968	ENSCSAG00000010599	URB2	99	34.026	Chlorocebus_sabaeus
ENSPMEG00000012356	urb2	69	40.924	ENSCHOG00000010163	URB2	69	40.264	Choloepus_hoffmanni
ENSPMEG00000012356	urb2	99	37.554	ENSCPBG00000006191	URB2	99	37.554	Chrysemys_picta_bellii
ENSPMEG00000012356	urb2	99	33.907	ENSCANG00000023711	URB2	99	33.842	Colobus_angolensis_palliatus
ENSPMEG00000012356	urb2	99	34.665	ENSCGRG00001009591	Urb2	99	34.820	Cricetulus_griseus_chok1gshd
ENSPMEG00000012356	urb2	99	34.665	ENSCGRG00000011259	Urb2	99	34.820	Cricetulus_griseus_crigri
ENSPMEG00000012356	urb2	100	52.898	ENSCSEG00000000299	urb2	100	52.898	Cynoglossus_semilaevis
ENSPMEG00000012356	urb2	100	75.310	ENSCVAG00000011011	urb2	100	75.684	Cyprinodon_variegatus
ENSPMEG00000012356	urb2	100	42.920	ENSDARG00000003217	urb2	100	65.385	Danio_rerio
ENSPMEG00000012356	urb2	97	32.457	ENSDNOG00000043064	URB2	99	32.646	Dasypus_novemcinctus
ENSPMEG00000012356	urb2	99	34.975	ENSDORG00000014975	Urb2	99	34.587	Dipodomys_ordii
ENSPMEG00000012356	urb2	95	38.028	ENSETEG00000002869	URB2	95	37.324	Echinops_telfairi
ENSPMEG00000012356	urb2	100	34.449	ENSEASG00005012060	URB2	100	34.400	Equus_asinus_asinus
ENSPMEG00000012356	urb2	93	57.241	ENSECAG00000012338	URB2	100	55.944	Equus_caballus
ENSPMEG00000012356	urb2	92	51.748	ENSEEUG00000002669	URB2	92	50.355	Erinaceus_europaeus
ENSPMEG00000012356	urb2	100	46.910	ENSELUG00000014647	urb2	100	47.004	Esox_lucius
ENSPMEG00000012356	urb2	99	34.139	ENSFCAG00000007662	URB2	99	34.121	Felis_catus
ENSPMEG00000012356	urb2	99	36.514	ENSFALG00000003385	URB2	99	36.076	Ficedula_albicollis
ENSPMEG00000012356	urb2	99	34.745	ENSFDAG00000021079	URB2	99	34.425	Fukomys_damarensis
ENSPMEG00000012356	urb2	100	76.193	ENSFHEG00000010357	urb2	100	76.317	Fundulus_heteroclitus
ENSPMEG00000012356	urb2	99	52.082	ENSGMOG00000012459	urb2	100	51.591	Gadus_morhua
ENSPMEG00000012356	urb2	99	36.152	ENSGALG00000011101	URB2	99	35.876	Gallus_gallus
ENSPMEG00000012356	urb2	100	60.610	ENSGACG00000016179	urb2	100	60.548	Gasterosteus_aculeatus
ENSPMEG00000012356	urb2	99	37.354	ENSGAGG00000021879	URB2	99	37.354	Gopherus_agassizii
ENSPMEG00000012356	urb2	99	34.199	ENSGGOG00000025643	URB2	99	34.070	Gorilla_gorilla
ENSPMEG00000012356	urb2	100	61.742	ENSHBUG00000018469	urb2	100	61.922	Haplochromis_burtoni
ENSPMEG00000012356	urb2	97	33.839	ENSHGLG00000016561	URB2	99	33.713	Heterocephalus_glaber_female
ENSPMEG00000012356	urb2	99	33.953	ENSHGLG00100001838	URB2	99	33.847	Heterocephalus_glaber_male
ENSPMEG00000012356	urb2	100	40.762	ENSIPUG00000020315	urb2	100	40.835	Ictalurus_punctatus
ENSPMEG00000012356	urb2	99	34.496	ENSSTOG00000025323	URB2	99	34.483	Ictidomys_tridecemlineatus
ENSPMEG00000012356	urb2	99	35.334	ENSJJAG00000011998	Urb2	99	35.006	Jaculus_jaculus
ENSPMEG00000012356	urb2	100	66.465	ENSKMAG00000020129	urb2	100	66.465	Kryptolebias_marmoratus
ENSPMEG00000012356	urb2	99	37.608	ENSLACG00000002038	URB2	99	37.331	Latimeria_chalumnae
ENSPMEG00000012356	urb2	99	43.292	ENSLOCG00000015462	urb2	99	43.416	Lepisosteus_oculatus
ENSPMEG00000012356	urb2	99	34.675	ENSLAFG00000012484	URB2	100	34.161	Loxodonta_africana
ENSPMEG00000012356	urb2	99	34.050	ENSMFAG00000039905	URB2	99	33.905	Macaca_fascicularis
ENSPMEG00000012356	urb2	99	34.214	ENSMMUG00000009509	URB2	99	34.067	Macaca_mulatta
ENSPMEG00000012356	urb2	99	34.152	ENSMNEG00000038762	URB2	99	34.006	Macaca_nemestrina
ENSPMEG00000012356	urb2	99	34.091	ENSMLEG00000043252	URB2	99	34.211	Mandrillus_leucophaeus
ENSPMEG00000012356	urb2	100	59.345	ENSMAMG00000020365	urb2	100	59.345	Mastacembelus_armatus
ENSPMEG00000012356	urb2	100	61.682	ENSMZEG00005011027	urb2	100	61.922	Maylandia_zebra
ENSPMEG00000012356	urb2	94	33.875	ENSMGAG00000012073	URB2	99	33.247	Meleagris_gallopavo
ENSPMEG00000012356	urb2	95	53.691	ENSMAUG00000017980	Urb2	99	52.349	Mesocricetus_auratus
ENSPMEG00000012356	urb2	100	34.642	ENSMICG00000033302	URB2	100	33.925	Microcebus_murinus
ENSPMEG00000012356	urb2	99	34.515	ENSMOCG00000020369	Urb2	99	34.515	Microtus_ochrogaster
ENSPMEG00000012356	urb2	100	61.726	ENSMALG00000006529	urb2	100	61.667	Monopterus_albus
ENSPMEG00000012356	urb2	99	34.015	ENSMUSG00000031976	Urb2	99	33.557	Mus_musculus
ENSPMEG00000012356	urb2	99	34.630	ENSMPUG00000012438	URB2	99	34.323	Mustela_putorius_furo
ENSPMEG00000012356	urb2	99	34.898	ENSNGAG00000016524	Urb2	99	34.889	Nannospalax_galili
ENSPMEG00000012356	urb2	99	34.400	ENSNLEG00000014450	URB2	99	34.149	Nomascus_leucogenys
ENSPMEG00000012356	urb2	91	41.892	ENSMEUG00000016434	URB2	92	41.441	Notamacropus_eugenii
ENSPMEG00000012356	urb2	88	78.571	ENSOPRG00000009906	URB2	86	78.571	Ochotona_princeps
ENSPMEG00000012356	urb2	99	35.144	ENSODEG00000005593	URB2	99	34.823	Octodon_degus
ENSPMEG00000012356	urb2	100	61.774	ENSONIG00000017078	urb2	100	62.024	Oreochromis_niloticus
ENSPMEG00000012356	urb2	99	33.648	ENSOANG00000013732	URB2	99	33.774	Ornithorhynchus_anatinus
ENSPMEG00000012356	urb2	100	35.112	ENSOCUG00000010700	URB2	100	34.969	Oryctolagus_cuniculus
ENSPMEG00000012356	urb2	100	60.427	ENSORLG00000010915	urb2	100	60.317	Oryzias_latipes
ENSPMEG00000012356	urb2	100	60.403	ENSORLG00020003361	urb2	100	60.403	Oryzias_latipes_hni
ENSPMEG00000012356	urb2	100	60.073	ENSORLG00015001534	urb2	100	60.073	Oryzias_latipes_hsok
ENSPMEG00000012356	urb2	100	61.458	ENSOMEG00000010076	urb2	100	61.666	Oryzias_melastigma
ENSPMEG00000012356	urb2	100	33.990	ENSOGAG00000003021	URB2	100	34.169	Otolemur_garnettii
ENSPMEG00000012356	urb2	100	34.823	ENSOARG00000003102	URB2	100	34.720	Ovis_aries
ENSPMEG00000012356	urb2	99	34.323	ENSPPAG00000040629	URB2	99	34.028	Pan_paniscus
ENSPMEG00000012356	urb2	99	34.012	ENSPPRG00000012767	URB2	99	33.994	Panthera_pardus
ENSPMEG00000012356	urb2	95	75.000	ENSPTIG00000012577	URB2	99	75.000	Panthera_tigris_altaica
ENSPMEG00000012356	urb2	99	34.385	ENSPTRG00000002092	URB2	99	34.090	Pan_troglodytes
ENSPMEG00000012356	urb2	99	33.047	ENSPANG00000002245	URB2	99	33.028	Papio_anubis
ENSPMEG00000012356	urb2	99	42.005	ENSPKIG00000005787	urb2	99	41.943	Paramormyrops_kingsleyae
ENSPMEG00000012356	urb2	99	36.638	ENSPSIG00000002690	URB2	99	36.700	Pelodiscus_sinensis
ENSPMEG00000012356	urb2	96	33.010	ENSPEMG00000019551	Urb2	100	32.988	Peromyscus_maniculatus_bairdii
ENSPMEG00000012356	urb2	99	34.206	ENSPCIG00000030071	URB2	99	33.828	Phascolarctos_cinereus
ENSPMEG00000012356	urb2	100	98.795	ENSPFOG00000014330	urb2	100	98.795	Poecilia_formosa
ENSPMEG00000012356	urb2	100	96.956	ENSPLAG00000014654	urb2	100	96.956	Poecilia_latipinna
ENSPMEG00000012356	urb2	100	94.737	ENSPREG00000010268	urb2	100	94.737	Poecilia_reticulata
ENSPMEG00000012356	urb2	100	33.909	ENSPPYG00000000123	URB2	100	33.680	Pongo_abelii
ENSPMEG00000012356	urb2	100	34.530	ENSPCOG00000023537	URB2	100	34.354	Propithecus_coquereli
ENSPMEG00000012356	urb2	99	32.447	ENSPVAG00000002108	URB2	99	32.434	Pteropus_vampyrus
ENSPMEG00000012356	urb2	91	60.408	ENSPNYG00000016840	urb2	100	60.672	Pundamilia_nyererei
ENSPMEG00000012356	urb2	99	41.491	ENSPNAG00000013684	urb2	99	41.579	Pygocentrus_nattereri
ENSPMEG00000012356	urb2	99	34.286	ENSRNOG00000026853	Urb2	97	33.824	Rattus_norvegicus
ENSPMEG00000012356	urb2	99	34.198	ENSRBIG00000037937	URB2	99	34.231	Rhinopithecus_bieti
ENSPMEG00000012356	urb2	99	34.074	ENSRROG00000039854	URB2	99	34.109	Rhinopithecus_roxellana
ENSPMEG00000012356	urb2	99	34.408	ENSSBOG00000023055	URB2	99	33.968	Saimiri_boliviensis_boliviensis
ENSPMEG00000012356	urb2	99	34.140	ENSSHAG00000014735	URB2	99	34.287	Sarcophilus_harrisii
ENSPMEG00000012356	urb2	97	41.841	ENSSFOG00015015432	urb2	98	41.894	Scleropages_formosus
ENSPMEG00000012356	urb2	91	60.026	ENSSMAG00000004984	urb2	100	60.026	Scophthalmus_maximus
ENSPMEG00000012356	urb2	100	62.654	ENSSDUG00000000902	urb2	100	62.889	Seriola_dumerili
ENSPMEG00000012356	urb2	99	36.219	ENSSPUG00000018549	URB2	99	36.894	Sphenodon_punctatus
ENSPMEG00000012356	urb2	100	64.777	ENSSPAG00000013632	urb2	100	64.777	Stegastes_partitus
ENSPMEG00000012356	urb2	100	34.929	ENSSSCG00000010186	URB2	100	34.214	Sus_scrofa
ENSPMEG00000012356	urb2	99	36.074	ENSTGUG00000009990	URB2	99	35.488	Taeniopygia_guttata
ENSPMEG00000012356	urb2	100	53.569	ENSTRUG00000008173	urb2	100	53.569	Takifugu_rubripes
ENSPMEG00000012356	urb2	100	52.999	ENSTNIG00000017689	urb2	100	53.143	Tetraodon_nigroviridis
ENSPMEG00000012356	urb2	95	78.571	ENSTTRG00000014864	URB2	95	78.571	Tursiops_truncatus
ENSPMEG00000012356	urb2	100	34.527	ENSUAMG00000015022	URB2	100	34.131	Ursus_americanus
ENSPMEG00000012356	urb2	100	34.527	ENSUMAG00000004728	URB2	100	34.176	Ursus_maritimus
ENSPMEG00000012356	urb2	53	57.971	ENSVPAG00000001750	-	51	56.522	Vicugna_pacos
ENSPMEG00000012356	urb2	99	34.240	ENSVVUG00000006747	URB2	99	33.599	Vulpes_vulpes
ENSPMEG00000012356	urb2	99	32.635	ENSXETG00000023331	urb2	99	32.697	Xenopus_tropicalis
ENSPMEG00000012356	urb2	100	91.122	ENSXMAG00000015059	urb2	100	91.122	Xiphophorus_maculatus