EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000012376 (Gene tree)
Gene ID: 106931425
Gene Symbol: gfm1
Alias: -
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 20416 bases
Position: chrKQ552349.1:40107-60522
Accession: 106931425
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000010349	GTP_EFTU	PF00009.27	1.1e-62	1	1
ENSPMEP00000010349	GTP_EFTU_D2	PF03144.25	3e-17	1	1
ENSPMEP00000010349	EFG_IV	PF03764.18	4.8e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000017167	-	4884	XM_015009556	ENSPMEP00000010349	748 (aa)	XP_014865042	UPI00072DAE6A

Gene Model

Click here to download ENSPMEG00000012376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000012376's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000012376	gfm1	92	34.014	ENSPMEG00000005813	gfm2	99	33.975
ENSPMEG00000012376	gfm1	53	32.683	ENSPMEG00000014175	guf1	63	32.683
ENSPMEG00000012376	gfm1	73	38.926	ENSPMEG00000003889	-	72	38.926
ENSPMEG00000012376	gfm1	76	38.926	ENSPMEG00000000362	EEF2	76	38.926

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000012376	gfm1	98	81.224	ENSG00000168827	GFM1	100	91.667	Homo_sapiens
ENSPMEG00000012376	gfm1	93	88.968	ENSAPOG00000016489	gfm1	99	88.968	Acanthochromis_polyacanthus
ENSPMEG00000012376	gfm1	96	83.148	ENSAMEG00000013542	GFM1	95	83.148	Ailuropoda_melanoleuca
ENSPMEG00000012376	gfm1	97	86.759	ENSACIG00000014465	gfm1	94	86.759	Amphilophus_citrinellus
ENSPMEG00000012376	gfm1	100	89.572	ENSAOCG00000006023	gfm1	100	89.572	Amphiprion_ocellaris
ENSPMEG00000012376	gfm1	100	89.439	ENSAPEG00000024499	gfm1	100	89.439	Amphiprion_percula
ENSPMEG00000012376	gfm1	100	90.508	ENSATEG00000013789	gfm1	100	90.508	Anabas_testudineus
ENSPMEG00000012376	gfm1	97	80.138	ENSAPLG00000005022	GFM1	100	80.138	Anas_platyrhynchos
ENSPMEG00000012376	gfm1	97	80.966	ENSACAG00000006829	GFM1	98	80.966	Anolis_carolinensis
ENSPMEG00000012376	gfm1	100	79.760	ENSANAG00000035983	GFM1	100	79.760	Aotus_nancymaae
ENSPMEG00000012376	gfm1	100	91.310	ENSACLG00000016586	gfm1	100	91.310	Astatotilapia_calliptera
ENSPMEG00000012376	gfm1	100	87.032	ENSAMXG00000013435	gfm1	98	87.962	Astyanax_mexicanus
ENSPMEG00000012376	gfm1	96	82.451	ENSBTAG00000027795	GFM1	95	82.451	Bos_taurus
ENSPMEG00000012376	gfm1	94	57.917	WBGene00009246	gfm-1	95	57.584	Caenorhabditis_elegans
ENSPMEG00000012376	gfm1	97	81.956	ENSCJAG00000000363	GFM1	97	81.956	Callithrix_jacchus
ENSPMEG00000012376	gfm1	98	81.608	ENSCAFG00000009006	GFM1	100	82.544	Canis_familiaris
ENSPMEG00000012376	gfm1	98	81.497	ENSCAFG00020005878	GFM1	98	83.008	Canis_lupus_dingo
ENSPMEG00000012376	gfm1	96	82.730	ENSCHIG00000015220	GFM1	95	82.730	Capra_hircus
ENSPMEG00000012376	gfm1	100	79.947	ENSTSYG00000002013	GFM1	100	79.947	Carlito_syrichta
ENSPMEG00000012376	gfm1	96	72.790	ENSCAPG00000005699	GFM1	97	72.790	Cavia_aperea
ENSPMEG00000012376	gfm1	100	80.239	ENSCPOG00000001194	GFM1	100	80.239	Cavia_porcellus
ENSPMEG00000012376	gfm1	97	81.680	ENSCCAG00000025561	GFM1	97	81.680	Cebus_capucinus
ENSPMEG00000012376	gfm1	100	79.760	ENSCATG00000037622	GFM1	100	79.760	Cercocebus_atys
ENSPMEG00000012376	gfm1	97	82.094	ENSCLAG00000002503	GFM1	96	82.094	Chinchilla_lanigera
ENSPMEG00000012376	gfm1	100	80.160	ENSCSAG00000012162	GFM1	100	80.160	Chlorocebus_sabaeus
ENSPMEG00000012376	gfm1	100	71.485	ENSCHOG00000004867	GFM1	100	71.485	Choloepus_hoffmanni
ENSPMEG00000012376	gfm1	100	80.507	ENSCPBG00000018367	GFM1	99	80.507	Chrysemys_picta_bellii
ENSPMEG00000012376	gfm1	94	59.021	ENSCING00000011960	-	93	59.021	Ciona_intestinalis
ENSPMEG00000012376	gfm1	95	59.444	ENSCSAVG00000008514	-	99	59.444	Ciona_savignyi
ENSPMEG00000012376	gfm1	98	81.088	ENSCANG00000031714	GFM1	100	79.893	Colobus_angolensis_palliatus
ENSPMEG00000012376	gfm1	100	80.027	ENSCGRG00001022095	GFM1	100	80.027	Cricetulus_griseus_chok1gshd
ENSPMEG00000012376	gfm1	100	80.027	ENSCGRG00000012043	GFM1	100	80.027	Cricetulus_griseus_crigri
ENSPMEG00000012376	gfm1	97	83.817	ENSCSEG00000017088	gfm1	99	83.817	Cynoglossus_semilaevis
ENSPMEG00000012376	gfm1	100	94.519	ENSCVAG00000004126	gfm1	100	94.519	Cyprinodon_variegatus
ENSPMEG00000012376	gfm1	100	84.492	ENSDARG00000063624	gfm1	100	84.492	Danio_rerio
ENSPMEG00000012376	gfm1	55	80.440	ENSDNOG00000016385	-	100	80.440	Dasypus_novemcinctus
ENSPMEG00000012376	gfm1	100	78.307	ENSDORG00000014165	Gfm1	100	78.307	Dipodomys_ordii
ENSPMEG00000012376	gfm1	95	69.111	FBgn0263133	mEFG1	95	69.111	Drosophila_melanogaster
ENSPMEG00000012376	gfm1	96	74.341	ENSETEG00000019197	GFM1	95	74.341	Echinops_telfairi
ENSPMEG00000012376	gfm1	90	63.056	ENSEBUG00000012794	gfm1	99	63.056	Eptatretus_burgeri
ENSPMEG00000012376	gfm1	96	61.111	ENSEEUG00000000429	GFM1	99	61.111	Erinaceus_europaeus
ENSPMEG00000012376	gfm1	100	85.695	ENSELUG00000014728	gfm1	100	85.695	Esox_lucius
ENSPMEG00000012376	gfm1	97	82.094	ENSFCAG00000013291	GFM1	100	80.239	Felis_catus
ENSPMEG00000012376	gfm1	90	80.148	ENSFALG00000007619	GFM1	100	80.148	Ficedula_albicollis
ENSPMEG00000012376	gfm1	100	79.178	ENSFDAG00000016559	GFM1	100	79.178	Fukomys_damarensis
ENSPMEG00000012376	gfm1	100	95.455	ENSFHEG00000006091	gfm1	100	95.455	Fundulus_heteroclitus
ENSPMEG00000012376	gfm1	97	87.895	ENSGMOG00000010161	gfm1	100	87.895	Gadus_morhua
ENSPMEG00000012376	gfm1	97	80.690	ENSGALG00000009634	GFM1	98	80.690	Gallus_gallus
ENSPMEG00000012376	gfm1	100	97.193	ENSGAFG00000012527	gfm1	100	97.193	Gambusia_affinis
ENSPMEG00000012376	gfm1	99	90.508	ENSGACG00000009864	gfm1	99	90.508	Gasterosteus_aculeatus
ENSPMEG00000012376	gfm1	98	81.224	ENSGGOG00000003085	GFM1	100	80.027	Gorilla_gorilla
ENSPMEG00000012376	gfm1	100	91.444	ENSHBUG00000002120	gfm1	100	91.444	Haplochromis_burtoni
ENSPMEG00000012376	gfm1	97	80.854	ENSHGLG00000016855	GFM1	96	80.854	Heterocephalus_glaber_female
ENSPMEG00000012376	gfm1	97	80.854	ENSHGLG00100013049	GFM1	96	80.854	Heterocephalus_glaber_male
ENSPMEG00000012376	gfm1	100	89.439	ENSHCOG00000007638	gfm1	100	89.439	Hippocampus_comes
ENSPMEG00000012376	gfm1	100	87.032	ENSIPUG00000005873	gfm1	100	87.032	Ictalurus_punctatus
ENSPMEG00000012376	gfm1	97	80.165	ENSSTOG00000010150	GFM1	98	80.165	Ictidomys_tridecemlineatus
ENSPMEG00000012376	gfm1	100	79.361	ENSJJAG00000016447	Gfm1	100	79.361	Jaculus_jaculus
ENSPMEG00000012376	gfm1	100	89.037	ENSKMAG00000020768	gfm1	100	89.037	Kryptolebias_marmoratus
ENSPMEG00000012376	gfm1	94	91.298	ENSLBEG00000021315	gfm1	100	91.298	Labrus_bergylta
ENSPMEG00000012376	gfm1	100	82.219	ENSLACG00000012295	GFM1	100	82.219	Latimeria_chalumnae
ENSPMEG00000012376	gfm1	97	80.575	ENSLOCG00000003778	gfm1	100	80.575	Lepisosteus_oculatus
ENSPMEG00000012376	gfm1	99	78.667	ENSLAFG00000010945	GFM1	99	79.444	Loxodonta_africana
ENSPMEG00000012376	gfm1	100	79.893	ENSMFAG00000035731	GFM1	100	79.893	Macaca_fascicularis
ENSPMEG00000012376	gfm1	100	79.893	ENSMMUG00000004961	GFM1	100	79.893	Macaca_mulatta
ENSPMEG00000012376	gfm1	100	79.760	ENSMNEG00000033245	GFM1	100	79.760	Macaca_nemestrina
ENSPMEG00000012376	gfm1	97	80.000	ENSMLEG00000030908	GFM1	99	79.865	Mandrillus_leucophaeus
ENSPMEG00000012376	gfm1	100	89.973	ENSMAMG00000011760	gfm1	100	89.973	Mastacembelus_armatus
ENSPMEG00000012376	gfm1	100	91.444	ENSMZEG00005016639	gfm1	100	91.444	Maylandia_zebra
ENSPMEG00000012376	gfm1	97	80.663	ENSMGAG00000010641	GFM1	97	80.663	Meleagris_gallopavo
ENSPMEG00000012376	gfm1	100	80.160	ENSMAUG00000000611	Gfm1	100	80.160	Mesocricetus_auratus
ENSPMEG00000012376	gfm1	97	82.645	ENSMICG00000049086	GFM1	96	82.645	Microcebus_murinus
ENSPMEG00000012376	gfm1	100	80.426	ENSMOCG00000000465	Gfm1	100	80.426	Microtus_ochrogaster
ENSPMEG00000012376	gfm1	97	90.771	ENSMMOG00000012538	gfm1	98	90.771	Mola_mola
ENSPMEG00000012376	gfm1	99	79.217	ENSMODG00000015673	GFM1	99	79.217	Monodelphis_domestica
ENSPMEG00000012376	gfm1	96	88.006	ENSMALG00000012508	gfm1	95	88.006	Monopterus_albus
ENSPMEG00000012376	gfm1	100	80.293	MGP_CAROLIEiJ_G0025052	Gfm1	100	80.293	Mus_caroli
ENSPMEG00000012376	gfm1	100	80.027	ENSMUSG00000027774	Gfm1	100	80.027	Mus_musculus
ENSPMEG00000012376	gfm1	100	79.627	MGP_PahariEiJ_G0026495	Gfm1	100	79.775	Mus_pahari
ENSPMEG00000012376	gfm1	100	80.027	MGP_SPRETEiJ_G0025994	Gfm1	100	80.027	Mus_spretus
ENSPMEG00000012376	gfm1	97	82.507	ENSMPUG00000002859	GFM1	96	82.507	Mustela_putorius_furo
ENSPMEG00000012376	gfm1	97	82.507	ENSMLUG00000000452	GFM1	96	82.507	Myotis_lucifugus
ENSPMEG00000012376	gfm1	100	79.467	ENSNGAG00000012375	Gfm1	100	79.467	Nannospalax_galili
ENSPMEG00000012376	gfm1	97	91.758	ENSNBRG00000004631	gfm1	99	91.758	Neolamprologus_brichardi
ENSPMEG00000012376	gfm1	97	81.818	ENSNLEG00000004176	GFM1	100	80.027	Nomascus_leucogenys
ENSPMEG00000012376	gfm1	91	72.794	ENSMEUG00000007784	GFM1	99	72.794	Notamacropus_eugenii
ENSPMEG00000012376	gfm1	100	79.840	ENSOPRG00000009860	GFM1	100	79.840	Ochotona_princeps
ENSPMEG00000012376	gfm1	99	81.216	ENSODEG00000004316	GFM1	100	80.106	Octodon_degus
ENSPMEG00000012376	gfm1	100	91.711	ENSONIG00000003772	gfm1	100	91.711	Oreochromis_niloticus
ENSPMEG00000012376	gfm1	98	82.016	ENSOCUG00000013561	GFM1	100	80.902	Oryctolagus_cuniculus
ENSPMEG00000012376	gfm1	95	91.525	ENSORLG00000006487	gfm1	100	91.525	Oryzias_latipes
ENSPMEG00000012376	gfm1	100	91.310	ENSORLG00020003362	gfm1	100	91.310	Oryzias_latipes_hni
ENSPMEG00000012376	gfm1	100	90.642	ENSORLG00015005829	gfm1	100	90.642	Oryzias_latipes_hsok
ENSPMEG00000012376	gfm1	100	91.578	ENSOMEG00000012894	gfm1	100	91.578	Oryzias_melastigma
ENSPMEG00000012376	gfm1	97	81.818	ENSOGAG00000008298	GFM1	96	81.818	Otolemur_garnettii
ENSPMEG00000012376	gfm1	96	81.831	ENSOARG00000002409	GFM1	99	81.831	Ovis_aries
ENSPMEG00000012376	gfm1	98	81.224	ENSPPAG00000033881	GFM1	100	80.027	Pan_paniscus
ENSPMEG00000012376	gfm1	97	82.094	ENSPPRG00000009281	GFM1	100	80.239	Panthera_pardus
ENSPMEG00000012376	gfm1	97	81.956	ENSPTIG00000012416	GFM1	100	80.106	Panthera_tigris_altaica
ENSPMEG00000012376	gfm1	98	81.224	ENSPTRG00000015570	GFM1	100	80.027	Pan_troglodytes
ENSPMEG00000012376	gfm1	100	79.893	ENSPANG00000016512	GFM1	100	79.893	Papio_anubis
ENSPMEG00000012376	gfm1	100	84.225	ENSPKIG00000004876	gfm1	100	84.225	Paramormyrops_kingsleyae
ENSPMEG00000012376	gfm1	100	80.212	ENSPSIG00000012567	GFM1	99	80.212	Pelodiscus_sinensis
ENSPMEG00000012376	gfm1	97	87.448	ENSPMGG00000014068	gfm1	100	87.448	Periophthalmus_magnuspinnatus
ENSPMEG00000012376	gfm1	100	80.160	ENSPEMG00000008942	Gfm1	100	80.160	Peromyscus_maniculatus_bairdii
ENSPMEG00000012376	gfm1	86	78.140	ENSPCIG00000020195	GFM1	98	79.585	Phascolarctos_cinereus
ENSPMEG00000012376	gfm1	100	99.866	ENSPFOG00000011022	gfm1	100	99.866	Poecilia_formosa
ENSPMEG00000012376	gfm1	98	98.370	ENSPLAG00000019585	gfm1	100	98.876	Poecilia_latipinna
ENSPMEG00000012376	gfm1	100	98.529	ENSPREG00000001332	gfm1	95	98.529	Poecilia_reticulata
ENSPMEG00000012376	gfm1	98	80.952	ENSPPYG00000014244	GFM1	100	79.760	Pongo_abelii
ENSPMEG00000012376	gfm1	94	80.228	ENSPCAG00000008934	GFM1	100	80.228	Procavia_capensis
ENSPMEG00000012376	gfm1	98	81.335	ENSPCOG00000022259	GFM1	100	80.106	Propithecus_coquereli
ENSPMEG00000012376	gfm1	97	81.680	ENSPVAG00000013605	GFM1	96	81.680	Pteropus_vampyrus
ENSPMEG00000012376	gfm1	100	91.176	ENSPNYG00000006037	gfm1	100	91.176	Pundamilia_nyererei
ENSPMEG00000012376	gfm1	100	86.898	ENSPNAG00000001237	gfm1	100	86.898	Pygocentrus_nattereri
ENSPMEG00000012376	gfm1	97	81.655	ENSRNOG00000012873	Gfm1	97	81.655	Rattus_norvegicus
ENSPMEG00000012376	gfm1	98	81.088	ENSRBIG00000031363	GFM1	100	79.893	Rhinopithecus_bieti
ENSPMEG00000012376	gfm1	98	81.224	ENSRROG00000031081	GFM1	100	80.027	Rhinopithecus_roxellana
ENSPMEG00000012376	gfm1	92	57.205	YLR069C	-	90	57.205	Saccharomyces_cerevisiae
ENSPMEG00000012376	gfm1	100	79.760	ENSSBOG00000023252	GFM1	100	79.760	Saimiri_boliviensis_boliviensis
ENSPMEG00000012376	gfm1	97	81.604	ENSSHAG00000017772	GFM1	97	81.379	Sarcophilus_harrisii
ENSPMEG00000012376	gfm1	100	84.513	ENSSFOG00015003117	gfm1	100	84.513	Scleropages_formosus
ENSPMEG00000012376	gfm1	100	89.171	ENSSMAG00000013221	gfm1	100	89.171	Scophthalmus_maximus
ENSPMEG00000012376	gfm1	100	90.508	ENSSDUG00000018665	gfm1	100	90.508	Seriola_dumerili
ENSPMEG00000012376	gfm1	100	90.374	ENSSLDG00000020606	gfm1	100	90.374	Seriola_lalandi_dorsalis
ENSPMEG00000012376	gfm1	99	77.808	ENSSPUG00000018686	GFM1	100	77.808	Sphenodon_punctatus
ENSPMEG00000012376	gfm1	100	92.647	ENSSPAG00000008800	gfm1	100	92.647	Stegastes_partitus
ENSPMEG00000012376	gfm1	96	82.173	ENSSSCG00000025651	GFM1	95	82.173	Sus_scrofa
ENSPMEG00000012376	gfm1	100	88.636	ENSTRUG00000009244	gfm1	100	88.636	Takifugu_rubripes
ENSPMEG00000012376	gfm1	100	90.642	ENSTNIG00000007729	gfm1	100	90.642	Tetraodon_nigroviridis
ENSPMEG00000012376	gfm1	90	73.630	ENSTBEG00000017404	GFM1	89	73.630	Tupaia_belangeri
ENSPMEG00000012376	gfm1	96	82.451	ENSTTRG00000001735	GFM1	95	82.451	Tursiops_truncatus
ENSPMEG00000012376	gfm1	97	82.369	ENSUAMG00000026381	GFM1	100	80.371	Ursus_americanus
ENSPMEG00000012376	gfm1	97	82.369	ENSUMAG00000011268	GFM1	100	80.371	Ursus_maritimus
ENSPMEG00000012376	gfm1	97	78.483	ENSVPAG00000009444	GFM1	96	78.483	Vicugna_pacos
ENSPMEG00000012376	gfm1	98	81.421	ENSVVUG00000020091	GFM1	100	82.249	Vulpes_vulpes
ENSPMEG00000012376	gfm1	100	80.452	ENSXETG00000032551	GFM1	100	80.452	Xenopus_tropicalis
ENSPMEG00000012376	gfm1	54	92.804	ENSXCOG00000012590	gfm1	93	92.804	Xiphophorus_couchianus
ENSPMEG00000012376	gfm1	100	97.594	ENSXMAG00000000261	gfm1	100	97.594	Xiphophorus_maculatus