EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000012485 (Gene tree)
Gene ID: 106919523
Gene Symbol: grsf1
Alias: -
Full Name: G-rich sequence factor 1-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 8929 bases
Position: chrKQ551349.1:94406-103334
Accession: 106919523
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000027821	RRM_1	PF00076.22	2.2e-24	1	2
ENSPMEP00000027821	RRM_1	PF00076.22	2.2e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000017398	-	3653	XM_014989937	ENSPMEP00000027821	405 (aa)	XP_014845423	UPI00072E1CAF

Gene Model

Click here to download ENSPMEG00000012485's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000012485's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000012485	grsf1	77	40.673	ENSPMEG00000019446	hnrnph1	80	40.854
ENSPMEG00000012485	grsf1	77	55.696	ENSPMEG00000008778	-	65	55.696

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000012485	grsf1	99	61.893	ENSAPOG00000012487	grsf1	99	62.379	Acanthochromis_polyacanthus
ENSPMEG00000012485	grsf1	99	62.347	ENSACIG00000005871	grsf1	99	62.836	Amphilophus_citrinellus
ENSPMEG00000012485	grsf1	99	64.390	ENSAOCG00000017462	-	99	64.390	Amphiprion_ocellaris
ENSPMEG00000012485	grsf1	99	64.320	ENSAPEG00000007240	-	99	64.320	Amphiprion_percula
ENSPMEG00000012485	grsf1	99	62.010	ENSATEG00000007185	grsf1	99	62.010	Anabas_testudineus
ENSPMEG00000012485	grsf1	99	62.864	ENSACLG00000003685	-	99	62.439	Astatotilapia_calliptera
ENSPMEG00000012485	grsf1	86	46.154	ENSAMXG00000012270	grsf1	98	46.154	Astyanax_mexicanus
ENSPMEG00000012485	grsf1	99	55.689	ENSCSEG00000019209	-	99	55.389	Cynoglossus_semilaevis
ENSPMEG00000012485	grsf1	99	71.921	ENSCVAG00000004476	grsf1	99	71.429	Cyprinodon_variegatus
ENSPMEG00000012485	grsf1	98	44.581	ENSDARG00000053021	grsf1	93	44.089	Danio_rerio
ENSPMEG00000012485	grsf1	99	58.981	ENSFHEG00000013358	-	99	59.223	Fundulus_heteroclitus
ENSPMEG00000012485	grsf1	76	72.727	ENSGMOG00000014047	grsf1	82	72.727	Gadus_morhua
ENSPMEG00000012485	grsf1	100	91.358	ENSGAFG00000004496	grsf1	100	91.358	Gambusia_affinis
ENSPMEG00000012485	grsf1	77	59.104	ENSGACG00000014447	grsf1	99	59.627	Gasterosteus_aculeatus
ENSPMEG00000012485	grsf1	99	62.287	ENSHBUG00000006284	grsf1	99	62.592	Haplochromis_burtoni
ENSPMEG00000012485	grsf1	99	55.448	ENSHCOG00000007715	-	99	55.556	Hippocampus_comes
ENSPMEG00000012485	grsf1	80	50.920	ENSIPUG00000010533	grsf1	80	50.920	Ictalurus_punctatus
ENSPMEG00000012485	grsf1	99	58.140	ENSKMAG00000004528	grsf1	99	58.140	Kryptolebias_marmoratus
ENSPMEG00000012485	grsf1	78	50.774	ENSLBEG00000018100	grsf1	98	50.774	Labrus_bergylta
ENSPMEG00000012485	grsf1	99	63.725	ENSMAMG00000002627	grsf1	99	63.524	Mastacembelus_armatus
ENSPMEG00000012485	grsf1	99	62.864	ENSMZEG00005020633	-	99	62.439	Maylandia_zebra
ENSPMEG00000012485	grsf1	95	60.367	ENSMMOG00000014231	grsf1	99	60.305	Mola_mola
ENSPMEG00000012485	grsf1	99	60.442	ENSMALG00000000251	grsf1	99	60.636	Monopterus_albus
ENSPMEG00000012485	grsf1	99	61.858	ENSNBRG00000017774	grsf1	96	61.425	Neolamprologus_brichardi
ENSPMEG00000012485	grsf1	99	63.592	ENSONIG00000014119	grsf1	99	63.415	Oreochromis_niloticus
ENSPMEG00000012485	grsf1	99	57.568	ENSORLG00000030211	grsf1	98	57.816	Oryzias_latipes
ENSPMEG00000012485	grsf1	87	62.784	ENSORLG00020014383	grsf1	87	62.784	Oryzias_latipes_hni
ENSPMEG00000012485	grsf1	87	61.932	ENSORLG00015006520	grsf1	88	62.216	Oryzias_latipes_hsok
ENSPMEG00000012485	grsf1	86	65.429	ENSOMEG00000009181	grsf1	99	61.404	Oryzias_melastigma
ENSPMEG00000012485	grsf1	83	52.679	ENSPKIG00000019432	grsf1	79	52.679	Paramormyrops_kingsleyae
ENSPMEG00000012485	grsf1	83	60.756	ENSPMGG00000013654	grsf1	93	58.263	Periophthalmus_magnuspinnatus
ENSPMEG00000012485	grsf1	100	98.765	ENSPFOG00000006122	grsf1	100	98.765	Poecilia_formosa
ENSPMEG00000012485	grsf1	100	97.531	ENSPLAG00000020977	grsf1	100	97.531	Poecilia_latipinna
ENSPMEG00000012485	grsf1	100	97.291	ENSPREG00000013383	grsf1	100	97.291	Poecilia_reticulata
ENSPMEG00000012485	grsf1	99	62.654	ENSPNYG00000005379	grsf1	99	62.162	Pundamilia_nyererei
ENSPMEG00000012485	grsf1	94	48.168	ENSPNAG00000014912	grsf1	86	49.315	Pygocentrus_nattereri
ENSPMEG00000012485	grsf1	82	44.214	ENSSFOG00015014620	grsf1	83	44.214	Scleropages_formosus
ENSPMEG00000012485	grsf1	81	60.366	ENSSMAG00000014181	grsf1	70	60.671	Scophthalmus_maximus
ENSPMEG00000012485	grsf1	99	60.149	ENSSDUG00000009397	-	97	63.501	Seriola_dumerili
ENSPMEG00000012485	grsf1	99	59.753	ENSSLDG00000025494	grsf1	99	60.247	Seriola_lalandi_dorsalis
ENSPMEG00000012485	grsf1	99	62.439	ENSSPAG00000023296	grsf1	99	62.195	Stegastes_partitus
ENSPMEG00000012485	grsf1	97	56.818	ENSTRUG00000015354	grsf1	99	56.341	Takifugu_rubripes
ENSPMEG00000012485	grsf1	82	56.173	ENSTNIG00000015350	-	99	56.481	Tetraodon_nigroviridis
ENSPMEG00000012485	grsf1	99	89.604	ENSXMAG00000029710	grsf1	99	89.604	Xiphophorus_maculatus