EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000012523 (Gene tree)
Gene ID: 106907196
Gene Symbol: npm1a
Alias: -
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 5882 bases
Position: chrKQ553494.1:46066-51947
Accession: 106907196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000010573	Nucleoplasmin	PF03066.15	2.2e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000017463	-	2417	XM_014972786	ENSPMEP00000010573	299 (aa)	XP_014828272	UPI0004442175

Gene Model

Click here to download ENSPMEG00000012523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000012523's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000012523	npm1a	100	68.954	ENSAPOG00000002813	npm1a	100	66.113	Acanthochromis_polyacanthus
ENSPMEG00000012523	npm1a	94	71.886	ENSACIG00000014201	npm1a	100	71.530	Amphilophus_citrinellus
ENSPMEG00000012523	npm1a	89	64.286	ENSAOCG00000004978	npm1a	100	64.286	Amphiprion_ocellaris
ENSPMEG00000012523	npm1a	100	68.092	ENSAPEG00000008594	npm1a	100	68.421	Amphiprion_percula
ENSPMEG00000012523	npm1a	100	68.269	ENSATEG00000008885	npm1a	99	68.506	Anabas_testudineus
ENSPMEG00000012523	npm1a	95	66.667	ENSACLG00000008376	npm1a	94	66.316	Astatotilapia_calliptera
ENSPMEG00000012523	npm1a	99	51.333	ENSAMXG00000010155	npm1a	99	53.846	Astyanax_mexicanus
ENSPMEG00000012523	npm1a	100	55.518	ENSCSEG00000011165	npm1a	96	74.675	Cynoglossus_semilaevis
ENSPMEG00000012523	npm1a	100	71.523	ENSCVAG00000008960	npm1a	100	70.530	Cyprinodon_variegatus
ENSPMEG00000012523	npm1a	98	61.224	ENSDARG00000014329	npm1a	95	69.872	Danio_rerio
ENSPMEG00000012523	npm1a	93	34.767	ENSEBUG00000012753	npm1a	86	36.601	Eptatretus_burgeri
ENSPMEG00000012523	npm1a	100	63.907	ENSELUG00000013705	npm1a	100	63.907	Esox_lucius
ENSPMEG00000012523	npm1a	100	73.422	ENSFHEG00000012496	npm1a	100	73.090	Fundulus_heteroclitus
ENSPMEG00000012523	npm1a	100	85.762	ENSGAFG00000013059	npm1a	100	85.430	Gambusia_affinis
ENSPMEG00000012523	npm1a	99	66.216	ENSGACG00000020319	npm1a	99	66.216	Gasterosteus_aculeatus
ENSPMEG00000012523	npm1a	99	68.770	ENSHBUG00000000776	npm1a	100	68.770	Haplochromis_burtoni
ENSPMEG00000012523	npm1a	100	53.074	ENSHCOG00000001059	npm1a	99	51.645	Hippocampus_comes
ENSPMEG00000012523	npm1a	98	59.539	ENSIPUG00000019452	npm1	99	58.882	Ictalurus_punctatus
ENSPMEG00000012523	npm1a	100	72.575	ENSKMAG00000010709	npm1a	100	69.231	Kryptolebias_marmoratus
ENSPMEG00000012523	npm1a	100	67.763	ENSLBEG00000008793	npm1a	100	66.447	Labrus_bergylta
ENSPMEG00000012523	npm1a	85	52.347	ENSLOCG00000009683	npm1a	100	52.347	Lepisosteus_oculatus
ENSPMEG00000012523	npm1a	100	67.657	ENSMAMG00000009344	npm1a	83	67.657	Mastacembelus_armatus
ENSPMEG00000012523	npm1a	99	66.772	ENSMZEG00005013717	npm1a	100	67.722	Maylandia_zebra
ENSPMEG00000012523	npm1a	95	67.368	ENSMMOG00000007980	npm1a	100	67.368	Mola_mola
ENSPMEG00000012523	npm1a	100	65.686	ENSMALG00000001146	npm1a	100	67.647	Monopterus_albus
ENSPMEG00000012523	npm1a	99	65.938	ENSNBRG00000013172	npm1a	100	64.465	Neolamprologus_brichardi
ENSPMEG00000012523	npm1a	99	65.333	ENSONIG00000001860	npm1a	98	67.110	Oreochromis_niloticus
ENSPMEG00000012523	npm1a	100	67.442	ENSORLG00000010179	npm1a	100	67.110	Oryzias_latipes
ENSPMEG00000012523	npm1a	100	68.333	ENSORLG00020020817	npm1a	100	67.667	Oryzias_latipes_hni
ENSPMEG00000012523	npm1a	100	67.774	ENSORLG00015003439	npm1a	100	67.110	Oryzias_latipes_hsok
ENSPMEG00000012523	npm1a	100	68.771	ENSOMEG00000007083	npm1a	100	66.777	Oryzias_melastigma
ENSPMEG00000012523	npm1a	100	54.369	ENSPKIG00000023943	npm1a	100	54.369	Paramormyrops_kingsleyae
ENSPMEG00000012523	npm1a	100	58.000	ENSPMGG00000011716	npm1a	100	58.000	Periophthalmus_magnuspinnatus
ENSPMEG00000012523	npm1a	100	100.000	ENSPFOG00000019173	npm1a	100	100.000	Poecilia_formosa
ENSPMEG00000012523	npm1a	100	97.010	ENSPLAG00000001093	npm1a	100	97.010	Poecilia_latipinna
ENSPMEG00000012523	npm1a	100	91.362	ENSPREG00000001647	npm1a	100	90.698	Poecilia_reticulata
ENSPMEG00000012523	npm1a	99	70.192	ENSPNYG00000019321	npm1a	100	70.833	Pundamilia_nyererei
ENSPMEG00000012523	npm1a	99	57.426	ENSPNAG00000026891	npm1a	99	58.940	Pygocentrus_nattereri
ENSPMEG00000012523	npm1a	100	58.224	ENSSFOG00015007074	npm1a	100	57.895	Scleropages_formosus
ENSPMEG00000012523	npm1a	100	67.987	ENSSMAG00000019090	npm1a	100	67.327	Scophthalmus_maximus
ENSPMEG00000012523	npm1a	100	68.977	ENSSDUG00000015609	npm1a	100	69.307	Seriola_dumerili
ENSPMEG00000012523	npm1a	100	69.536	ENSSLDG00000017849	npm1a	100	69.536	Seriola_lalandi_dorsalis
ENSPMEG00000012523	npm1a	100	57.525	ENSSPAG00000021660	npm1a	100	57.860	Stegastes_partitus
ENSPMEG00000012523	npm1a	100	67.532	ENSTRUG00000024003	npm1a	100	68.506	Takifugu_rubripes
ENSPMEG00000012523	npm1a	100	68.000	ENSTNIG00000010773	npm1a	100	66.667	Tetraodon_nigroviridis
ENSPMEG00000012523	npm1a	93	84.452	ENSXCOG00000005958	npm1a	100	82.686	Xiphophorus_couchianus
ENSPMEG00000012523	npm1a	100	88.449	ENSXMAG00000000396	npm1a	100	88.449	Xiphophorus_maculatus