EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000012751 (Gene tree)
Gene ID: 106929406
Gene Symbol: srsf5b
Alias: -
Full Name: serine/arginine-rich splicing factor 5-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 6792 bases
Position: chrKQ552106.1:188490-195281
Accession: 106929406
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000027958	RRM_1	PF00076.22	5.6e-32	1	2
ENSPMEP00000027958	RRM_1	PF00076.22	5.6e-32	2	2
ENSPMEP00000010743	RRM_1	PF00076.22	8.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000017723	-	1989	XM_015006336	ENSPMEP00000027958	301 (aa)	XP_014861822	UPI00044479BE
ENSPMET00000017679	-	482	-	ENSPMEP00000010743	152 (aa)	-	UPI00072C84A2

Gene Model

Click here to download ENSPMEG00000012751's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000012751's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000012751	srsf5b	50	44.578	ENSPMEG00000001983	srsf3b	85	39.640
ENSPMEG00000012751	srsf5b	70	36.697	ENSPMEG00000012960	-	67	36.697
ENSPMEG00000012751	srsf5b	82	58.871	ENSPMEG00000006042	SRSF6	52	60.106
ENSPMEG00000012751	srsf5b	82	49.618	ENSPMEG00000002388	-	94	41.065
ENSPMEG00000012751	srsf5b	84	36.090	ENSPMEG00000008809	srsf9	68	42.778
ENSPMEG00000012751	srsf5b	82	63.200	ENSPMEG00000023638	srsf4	51	65.193
ENSPMEG00000012751	srsf5b	84	67.910	ENSPMEG00000016339	srsf5a	92	53.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000012751	srsf5b	88	73.684	ENSG00000100650	SRSF5	99	75.969	Homo_sapiens
ENSPMEG00000012751	srsf5b	84	100.000	ENSAPOG00000008642	srsf5b	92	94.052	Acanthochromis_polyacanthus
ENSPMEG00000012751	srsf5b	84	75.000	ENSAMEG00000014574	SRSF5	96	68.231	Ailuropoda_melanoleuca
ENSPMEG00000012751	srsf5b	100	90.429	ENSACIG00000010742	srsf5b	92	93.333	Amphilophus_citrinellus
ENSPMEG00000012751	srsf5b	84	100.000	ENSAOCG00000005719	srsf5b	92	93.680	Amphiprion_ocellaris
ENSPMEG00000012751	srsf5b	84	100.000	ENSAPEG00000007830	srsf5b	92	93.680	Amphiprion_percula
ENSPMEG00000012751	srsf5b	84	98.438	ENSATEG00000019112	srsf5b	92	92.193	Anabas_testudineus
ENSPMEG00000012751	srsf5b	80	76.230	ENSAPLG00000014681	SRSF5	96	69.039	Anas_platyrhynchos
ENSPMEG00000012751	srsf5b	84	77.344	ENSACAG00000005143	SRSF5	96	72.527	Anolis_carolinensis
ENSPMEG00000012751	srsf5b	85	72.093	ENSANAG00000037529	-	95	74.219	Aotus_nancymaae
ENSPMEG00000012751	srsf5b	88	73.684	ENSANAG00000027977	-	92	75.188	Aotus_nancymaae
ENSPMEG00000012751	srsf5b	100	91.060	ENSACLG00000026424	srsf5b	92	94.052	Astatotilapia_calliptera
ENSPMEG00000012751	srsf5b	100	90.132	ENSAMXG00000011932	srsf5b	100	89.474	Astyanax_mexicanus
ENSPMEG00000012751	srsf5b	84	75.000	ENSBTAG00000011596	SRSF5	96	68.231	Bos_taurus
ENSPMEG00000012751	srsf5b	88	73.684	ENSCJAG00000014884	SRSF5	92	75.188	Callithrix_jacchus
ENSPMEG00000012751	srsf5b	84	75.000	ENSCAFG00000016589	SRSF5	96	68.231	Canis_familiaris
ENSPMEG00000012751	srsf5b	84	75.000	ENSCAFG00020005661	SRSF5	96	68.231	Canis_lupus_dingo
ENSPMEG00000012751	srsf5b	84	75.000	ENSCHIG00000016794	SRSF5	95	68.231	Capra_hircus
ENSPMEG00000012751	srsf5b	88	73.684	ENSTSYG00000007786	SRSF5	98	70.787	Carlito_syrichta
ENSPMEG00000012751	srsf5b	84	75.000	ENSCAPG00000008801	SRSF5	97	71.533	Cavia_aperea
ENSPMEG00000012751	srsf5b	84	75.000	ENSCPOG00000039926	SRSF5	91	72.624	Cavia_porcellus
ENSPMEG00000012751	srsf5b	88	73.684	ENSCCAG00000029002	SRSF5	92	75.188	Cebus_capucinus
ENSPMEG00000012751	srsf5b	88	73.684	ENSCATG00000045051	SRSF5	92	75.188	Cercocebus_atys
ENSPMEG00000012751	srsf5b	84	75.000	ENSCLAG00000004755	SRSF5	96	71.377	Chinchilla_lanigera
ENSPMEG00000012751	srsf5b	84	75.000	ENSCSAG00000013041	SRSF5	96	69.203	Chlorocebus_sabaeus
ENSPMEG00000012751	srsf5b	84	75.000	ENSCPBG00000021653	SRSF5	96	71.795	Chrysemys_picta_bellii
ENSPMEG00000012751	srsf5b	88	73.684	ENSCANG00000030560	SRSF5	92	75.188	Colobus_angolensis_palliatus
ENSPMEG00000012751	srsf5b	84	75.000	ENSCGRG00001015339	Srsf5	96	66.176	Cricetulus_griseus_chok1gshd
ENSPMEG00000012751	srsf5b	84	75.000	ENSCGRG00000009833	Srsf5	96	71.691	Cricetulus_griseus_crigri
ENSPMEG00000012751	srsf5b	84	97.692	ENSCSEG00000003801	srsf5b	91	89.888	Cynoglossus_semilaevis
ENSPMEG00000012751	srsf5b	100	90.462	ENSCVAG00000017240	srsf5b	100	90.462	Cyprinodon_variegatus
ENSPMEG00000012751	srsf5b	97	90.476	ENSDARG00000027734	srsf5b	90	93.750	Danio_rerio
ENSPMEG00000012751	srsf5b	84	75.000	ENSDNOG00000006160	SRSF5	87	68.045	Dasypus_novemcinctus
ENSPMEG00000012751	srsf5b	84	75.000	ENSDORG00000003989	Srsf5	96	64.000	Dipodomys_ordii
ENSPMEG00000012751	srsf5b	84	72.656	ENSETEG00000020396	SRSF5	87	66.038	Echinops_telfairi
ENSPMEG00000012751	srsf5b	84	56.618	ENSEBUG00000006229	srsf5b	89	53.285	Eptatretus_burgeri
ENSPMEG00000012751	srsf5b	84	75.000	ENSEASG00005016615	SRSF5	96	68.231	Equus_asinus_asinus
ENSPMEG00000012751	srsf5b	88	73.684	ENSECAG00000026873	SRSF5	92	75.188	Equus_caballus
ENSPMEG00000012751	srsf5b	100	82.249	ENSELUG00000019852	srsf5b	100	83.432	Esox_lucius
ENSPMEG00000012751	srsf5b	88	73.684	ENSFCAG00000008848	SRSF5	92	75.188	Felis_catus
ENSPMEG00000012751	srsf5b	84	76.562	ENSFALG00000004979	SRSF5	94	72.830	Ficedula_albicollis
ENSPMEG00000012751	srsf5b	84	75.000	ENSFDAG00000011562	SRSF5	87	68.045	Fukomys_damarensis
ENSPMEG00000012751	srsf5b	100	94.788	ENSFHEG00000009476	srsf5b	100	94.788	Fundulus_heteroclitus
ENSPMEG00000012751	srsf5b	84	91.176	ENSGMOG00000000595	srsf5b	99	80.088	Gadus_morhua
ENSPMEG00000012751	srsf5b	88	74.436	ENSGALG00000009421	SRSF5	92	74.436	Gallus_gallus
ENSPMEG00000012751	srsf5b	100	99.336	ENSGAFG00000002865	srsf5b	100	99.336	Gambusia_affinis
ENSPMEG00000012751	srsf5b	100	83.125	ENSGACG00000007834	srsf5b	100	86.250	Gasterosteus_aculeatus
ENSPMEG00000012751	srsf5b	84	75.000	ENSGAGG00000004447	SRSF5	96	71.795	Gopherus_agassizii
ENSPMEG00000012751	srsf5b	88	73.684	ENSGGOG00000016462	SRSF5	92	75.188	Gorilla_gorilla
ENSPMEG00000012751	srsf5b	100	90.728	ENSHBUG00000012462	srsf5b	93	100.000	Haplochromis_burtoni
ENSPMEG00000012751	srsf5b	84	74.219	ENSHGLG00000010147	SRSF5	96	68.364	Heterocephalus_glaber_female
ENSPMEG00000012751	srsf5b	59	59.777	ENSHGLG00100000095	-	62	59.444	Heterocephalus_glaber_male
ENSPMEG00000012751	srsf5b	84	74.219	ENSHGLG00100015328	SRSF5	96	68.364	Heterocephalus_glaber_male
ENSPMEG00000012751	srsf5b	84	85.606	ENSHCOG00000005592	srsf5b	91	78.182	Hippocampus_comes
ENSPMEG00000012751	srsf5b	84	75.000	ENSSTOG00000020672	SRSF5	96	68.727	Ictidomys_tridecemlineatus
ENSPMEG00000012751	srsf5b	84	75.000	ENSJJAG00000001688	Srsf5	96	71.636	Jaculus_jaculus
ENSPMEG00000012751	srsf5b	100	95.395	ENSKMAG00000020486	srsf5b	100	95.395	Kryptolebias_marmoratus
ENSPMEG00000012751	srsf5b	84	97.692	ENSLBEG00000013647	srsf5b	92	91.513	Labrus_bergylta
ENSPMEG00000012751	srsf5b	84	78.906	ENSLACG00000005874	SRSF5	92	74.340	Latimeria_chalumnae
ENSPMEG00000012751	srsf5b	84	81.203	ENSLOCG00000012438	srsf5b	94	67.518	Lepisosteus_oculatus
ENSPMEG00000012751	srsf5b	84	74.219	ENSLAFG00000005260	SRSF5	86	67.669	Loxodonta_africana
ENSPMEG00000012751	srsf5b	88	73.684	ENSMFAG00000002393	SRSF5	92	75.188	Macaca_fascicularis
ENSPMEG00000012751	srsf5b	88	73.684	ENSMNEG00000030872	SRSF5	92	75.188	Macaca_nemestrina
ENSPMEG00000012751	srsf5b	88	73.684	ENSMLEG00000030017	SRSF5	92	75.188	Mandrillus_leucophaeus
ENSPMEG00000012751	srsf5b	84	97.656	ENSMAMG00000002673	srsf5b	92	92.565	Mastacembelus_armatus
ENSPMEG00000012751	srsf5b	100	91.060	ENSMZEG00005003550	srsf5b	92	94.052	Maylandia_zebra
ENSPMEG00000012751	srsf5b	59	66.292	ENSMGAG00000011835	SRSF5	98	60.526	Meleagris_gallopavo
ENSPMEG00000012751	srsf5b	84	75.000	ENSMAUG00000009544	Srsf5	96	71.691	Mesocricetus_auratus
ENSPMEG00000012751	srsf5b	88	73.684	ENSMICG00000037432	-	92	75.188	Microcebus_murinus
ENSPMEG00000012751	srsf5b	84	75.000	ENSMOCG00000013134	Srsf5	96	71.691	Microtus_ochrogaster
ENSPMEG00000012751	srsf5b	99	83.660	ENSMMOG00000000137	srsf5b	95	81.818	Mola_mola
ENSPMEG00000012751	srsf5b	84	75.000	ENSMODG00000011362	SRSF5	96	71.429	Monodelphis_domestica
ENSPMEG00000012751	srsf5b	100	97.386	ENSMALG00000021875	srsf5b	100	97.386	Monopterus_albus
ENSPMEG00000012751	srsf5b	84	75.000	ENSMUSG00000021134	Srsf5	96	90.909	Mus_musculus
ENSPMEG00000012751	srsf5b	84	75.000	MGP_PahariEiJ_G0029659	Srsf5	96	71.691	Mus_pahari
ENSPMEG00000012751	srsf5b	84	75.000	ENSMPUG00000007458	SRSF5	96	68.231	Mustela_putorius_furo
ENSPMEG00000012751	srsf5b	84	75.000	ENSMLUG00000011939	SRSF5	96	66.065	Myotis_lucifugus
ENSPMEG00000012751	srsf5b	84	75.000	ENSNGAG00000010073	-	96	71.062	Nannospalax_galili
ENSPMEG00000012751	srsf5b	100	87.500	ENSNBRG00000001285	srsf5b	92	92.251	Neolamprologus_brichardi
ENSPMEG00000012751	srsf5b	88	73.684	ENSNLEG00000001615	SRSF5	92	75.188	Nomascus_leucogenys
ENSPMEG00000012751	srsf5b	84	75.000	ENSOPRG00000008286	SRSF5	95	65.942	Ochotona_princeps
ENSPMEG00000012751	srsf5b	84	74.219	ENSODEG00000000700	-	97	71.970	Octodon_degus
ENSPMEG00000012751	srsf5b	84	75.000	ENSODEG00000013469	-	92	73.180	Octodon_degus
ENSPMEG00000012751	srsf5b	100	91.060	ENSONIG00000005759	srsf5b	92	94.052	Oreochromis_niloticus
ENSPMEG00000012751	srsf5b	84	68.750	ENSOANG00000013336	SRSF5	96	66.308	Ornithorhynchus_anatinus
ENSPMEG00000012751	srsf5b	93	68.571	ENSOCUG00000009274	SRSF5	95	68.231	Oryctolagus_cuniculus
ENSPMEG00000012751	srsf5b	84	90.076	ENSORLG00000029854	srsf5b	92	79.461	Oryzias_latipes
ENSPMEG00000012751	srsf5b	89	90.775	ENSORLG00015001720	srsf5b	92	91.144	Oryzias_latipes_hsok
ENSPMEG00000012751	srsf5b	90	90.476	ENSOMEG00000020690	srsf5b	67	90.370	Oryzias_melastigma
ENSPMEG00000012751	srsf5b	84	75.000	ENSOGAG00000015122	SRSF5	96	68.727	Otolemur_garnettii
ENSPMEG00000012751	srsf5b	88	73.684	ENSPPAG00000029921	SRSF5	92	75.188	Pan_paniscus
ENSPMEG00000012751	srsf5b	88	73.684	ENSPPRG00000012903	SRSF5	92	75.188	Panthera_pardus
ENSPMEG00000012751	srsf5b	88	73.684	ENSPTIG00000018589	SRSF5	92	75.188	Panthera_tigris_altaica
ENSPMEG00000012751	srsf5b	88	73.684	ENSPTRG00000006488	SRSF5	92	75.188	Pan_troglodytes
ENSPMEG00000012751	srsf5b	88	73.684	ENSPANG00000021091	SRSF5	92	75.188	Papio_anubis
ENSPMEG00000012751	srsf5b	84	75.000	ENSPSIG00000012522	SRSF5	93	73.946	Pelodiscus_sinensis
ENSPMEG00000012751	srsf5b	88	91.791	ENSPMGG00000021646	srsf5b	95	91.791	Periophthalmus_magnuspinnatus
ENSPMEG00000012751	srsf5b	84	75.000	ENSPEMG00000020173	Srsf5	96	66.176	Peromyscus_maniculatus_bairdii
ENSPMEG00000012751	srsf5b	84	56.204	ENSPMAG00000007790	srsf5b	92	52.768	Petromyzon_marinus
ENSPMEG00000012751	srsf5b	84	75.000	ENSPCIG00000011877	SRSF5	96	71.429	Phascolarctos_cinereus
ENSPMEG00000012751	srsf5b	100	100.000	ENSPFOG00000017700	srsf5b	100	100.000	Poecilia_formosa
ENSPMEG00000012751	srsf5b	100	99.669	ENSPLAG00000006480	srsf5b	100	99.669	Poecilia_latipinna
ENSPMEG00000012751	srsf5b	100	99.336	ENSPREG00000010381	srsf5b	100	99.336	Poecilia_reticulata
ENSPMEG00000012751	srsf5b	84	75.000	ENSPPYG00000005945	SRSF5	96	69.203	Pongo_abelii
ENSPMEG00000012751	srsf5b	84	74.219	ENSPCAG00000004405	SRSF5	100	79.605	Procavia_capensis
ENSPMEG00000012751	srsf5b	88	73.684	ENSPCOG00000014442	SRSF5	92	75.188	Propithecus_coquereli
ENSPMEG00000012751	srsf5b	85	99.225	ENSPNYG00000002669	srsf5b	95	99.225	Pundamilia_nyererei
ENSPMEG00000012751	srsf5b	100	89.474	ENSPNAG00000011262	srsf5b	100	88.816	Pygocentrus_nattereri
ENSPMEG00000012751	srsf5b	84	75.000	ENSRNOG00000005513	Srsf5	96	66.176	Rattus_norvegicus
ENSPMEG00000012751	srsf5b	88	73.684	ENSRBIG00000013003	SRSF5	92	75.188	Rhinopithecus_bieti
ENSPMEG00000012751	srsf5b	88	73.684	ENSRROG00000043407	SRSF5	92	75.188	Rhinopithecus_roxellana
ENSPMEG00000012751	srsf5b	88	73.684	ENSSBOG00000030784	SRSF5	92	75.188	Saimiri_boliviensis_boliviensis
ENSPMEG00000012751	srsf5b	84	75.000	ENSSHAG00000002871	SRSF5	96	71.429	Sarcophilus_harrisii
ENSPMEG00000012751	srsf5b	84	90.780	ENSSMAG00000019728	srsf5b	91	82.373	Scophthalmus_maximus
ENSPMEG00000012751	srsf5b	84	99.219	ENSSDUG00000005766	srsf5b	92	93.487	Seriola_dumerili
ENSPMEG00000012751	srsf5b	100	97.368	ENSSLDG00000023255	srsf5b	100	97.368	Seriola_lalandi_dorsalis
ENSPMEG00000012751	srsf5b	61	71.196	ENSSARG00000001059	SRSF5	87	59.398	Sorex_araneus
ENSPMEG00000012751	srsf5b	88	74.638	ENSSPUG00000002464	SRSF5	93	72.535	Sphenodon_punctatus
ENSPMEG00000012751	srsf5b	84	100.000	ENSSPAG00000015325	srsf5b	92	94.052	Stegastes_partitus
ENSPMEG00000012751	srsf5b	84	75.000	ENSSSCG00000032583	SRSF5	96	71.273	Sus_scrofa
ENSPMEG00000012751	srsf5b	84	76.562	ENSTGUG00000011425	SRSF5	94	73.208	Taeniopygia_guttata
ENSPMEG00000012751	srsf5b	84	90.625	ENSTRUG00000017811	srsf5b	95	77.852	Takifugu_rubripes
ENSPMEG00000012751	srsf5b	91	82.182	ENSTNIG00000016411	srsf5b	95	77.500	Tetraodon_nigroviridis
ENSPMEG00000012751	srsf5b	90	72.263	ENSTBEG00000001972	SRSF5	96	67.636	Tupaia_belangeri
ENSPMEG00000012751	srsf5b	84	74.803	ENSTTRG00000003318	SRSF5	95	68.116	Tursiops_truncatus
ENSPMEG00000012751	srsf5b	84	75.000	ENSUAMG00000014184	SRSF5	96	68.231	Ursus_americanus
ENSPMEG00000012751	srsf5b	84	75.000	ENSUMAG00000009827	SRSF5	96	63.538	Ursus_maritimus
ENSPMEG00000012751	srsf5b	84	75.000	ENSVPAG00000006448	SRSF5	96	68.727	Vicugna_pacos
ENSPMEG00000012751	srsf5b	84	75.000	ENSVVUG00000003790	SRSF5	96	68.231	Vulpes_vulpes
ENSPMEG00000012751	srsf5b	84	79.070	ENSXETG00000002211	srsf5	94	73.881	Xenopus_tropicalis
ENSPMEG00000012751	srsf5b	100	96.026	ENSXCOG00000001570	srsf5b	100	96.026	Xiphophorus_couchianus
ENSPMEG00000012751	srsf5b	100	99.346	ENSXMAG00000026416	srsf5b	100	99.346	Xiphophorus_maculatus