EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000012831 (Gene tree)
Gene ID: 106907951
Gene Symbol: -
Alias: -
Full Name: RNA-binding motif%2C single-stranded-interacting protein 3-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 52547 bases
Position: chrKQ553657.1:13572-66118
Accession: 106907951
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000028023	RRM_1	PF00076.22	3.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000017782	-	684	XM_014973863	ENSPMEP00000028023	227 (aa)	XP_014829349	-

Gene Model

Click here to download ENSPMEG00000012831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000012831's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000012831	-	50	30.508	ENSPMEG00000014399	pabpc1b	52	30.508
ENSPMEG00000012831	-	61	35.099	ENSPMEG00000000283	ELAVL1	52	37.209

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000012831	-	72	89.024	ENSG00000144642	RBMS3	62	89.024	Homo_sapiens
ENSPMEG00000012831	-	72	81.595	ENSACIG00000021113	RBMS3	56	80.405	Amphilophus_citrinellus
ENSPMEG00000012831	-	72	82.822	ENSAMXG00000043770	-	63	82.822	Astyanax_mexicanus
ENSPMEG00000012831	-	70	89.441	ENSTSYG00000002615	RBMS3	51	89.441	Carlito_syrichta
ENSPMEG00000012831	-	72	90.798	ENSCSEG00000014677	-	57	91.216	Cynoglossus_semilaevis
ENSPMEG00000012831	-	72	94.479	ENSDARG00000044574	rbms3	69	93.985	Danio_rerio
ENSPMEG00000012831	-	72	90.184	ENSELUG00000006905	-	59	91.216	Esox_lucius
ENSPMEG00000012831	-	72	96.933	ENSHBUG00000021196	rbms3	57	96.933	Haplochromis_burtoni
ENSPMEG00000012831	-	72	88.415	MGP_CAROLIEiJ_G0032783	Rbms3	54	92.793	Mus_caroli
ENSPMEG00000012831	-	72	88.415	ENSMUSG00000039607	Rbms3	54	92.793	Mus_musculus
ENSPMEG00000012831	-	72	88.415	MGP_PahariEiJ_G0015650	Rbms3	54	92.793	Mus_pahari
ENSPMEG00000012831	-	72	88.415	MGP_SPRETEiJ_G0033930	Rbms3	54	92.793	Mus_spretus
ENSPMEG00000012831	-	72	87.117	ENSPKIG00000007989	-	64	87.117	Paramormyrops_kingsleyae
ENSPMEG00000012831	-	72	90.184	ENSPMGG00000021683	-	50	88.235	Periophthalmus_magnuspinnatus
ENSPMEG00000012831	-	97	97.285	ENSPLAG00000016866	-	58	97.285	Poecilia_latipinna
ENSPMEG00000012831	-	72	90.184	ENSPREG00000018221	-	60	87.261	Poecilia_reticulata
ENSPMEG00000012831	-	72	89.024	ENSVVUG00000004660	RBMS3	71	89.024	Vulpes_vulpes