EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000012913 (Gene tree)
Gene ID: 106914911
Gene Symbol: trub2
Alias: -
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 4599 bases
Position: chrKQ551122.1:36130-40728
Accession: 106914911
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000010924	TruB_N	PF01509.18	3.7e-25	1	1
ENSPMEP00000010915	TruB_N	PF01509.18	4.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000017901	-	3041	XM_014982103	ENSPMEP00000010924	337 (aa)	XP_014837589	UPI00072EB8DB
ENSPMET00000017895	-	2954	XM_014982102	ENSPMEP00000010915	348 (aa)	XP_014837588	UPI00072EE9A5

Gene Model

Click here to download ENSPMEG00000012913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000012913's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000012913	trub2	59	33.500	ENSPMEG00000009064	trub1	71	33.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000012913	trub2	89	52.824	ENSG00000167112	TRUB2	91	52.824	Homo_sapiens
ENSPMEG00000012913	trub2	76	71.512	ENSAPOG00000018284	-	94	71.512	Acanthochromis_polyacanthus
ENSPMEG00000012913	trub2	52	67.222	ENSAPOG00000018216	-	85	67.222	Acanthochromis_polyacanthus
ENSPMEG00000012913	trub2	73	73.577	ENSAPOG00000015733	trub2	88	73.577	Acanthochromis_polyacanthus
ENSPMEG00000012913	trub2	88	54.209	ENSAMEG00000015395	TRUB2	89	54.209	Ailuropoda_melanoleuca
ENSPMEG00000012913	trub2	97	71.951	ENSACIG00000016500	trub2	99	72.561	Amphilophus_citrinellus
ENSPMEG00000012913	trub2	98	73.556	ENSAOCG00000002330	trub2	96	73.556	Amphiprion_ocellaris
ENSPMEG00000012913	trub2	98	73.556	ENSAPEG00000013177	trub2	96	73.556	Amphiprion_percula
ENSPMEG00000012913	trub2	91	71.336	ENSATEG00000011371	trub2	97	71.336	Anabas_testudineus
ENSPMEG00000012913	trub2	87	50.171	ENSAPLG00000009254	TRUB2	97	49.498	Anas_platyrhynchos
ENSPMEG00000012913	trub2	84	54.064	ENSACAG00000007331	TRUB2	86	54.064	Anolis_carolinensis
ENSPMEG00000012913	trub2	90	53.135	ENSANAG00000036234	TRUB2	97	53.135	Aotus_nancymaae
ENSPMEG00000012913	trub2	97	72.477	ENSACLG00000010793	trub2	98	72.477	Astatotilapia_calliptera
ENSPMEG00000012913	trub2	91	59.486	ENSAMXG00000031679	trub2	89	59.486	Astyanax_mexicanus
ENSPMEG00000012913	trub2	89	52.492	ENSCJAG00000020009	TRUB2	91	52.492	Callithrix_jacchus
ENSPMEG00000012913	trub2	89	51.290	ENSCAFG00000020068	TRUB2	88	52.901	Canis_familiaris
ENSPMEG00000012913	trub2	50	52.907	ENSCAFG00020017325	-	95	52.907	Canis_lupus_dingo
ENSPMEG00000012913	trub2	86	53.425	ENSCHIG00000021160	TRUB2	88	53.425	Capra_hircus
ENSPMEG00000012913	trub2	82	56.738	ENSTSYG00000034163	TRUB2	84	56.738	Carlito_syrichta
ENSPMEG00000012913	trub2	79	52.045	ENSCAPG00000000223	TRUB2	91	52.045	Cavia_aperea
ENSPMEG00000012913	trub2	91	52.427	ENSCPOG00000013535	TRUB2	92	52.427	Cavia_porcellus
ENSPMEG00000012913	trub2	85	54.514	ENSCCAG00000026531	-	87	54.514	Cebus_capucinus
ENSPMEG00000012913	trub2	90	49.671	ENSCCAG00000028463	-	92	49.671	Cebus_capucinus
ENSPMEG00000012913	trub2	91	53.443	ENSCATG00000038234	TRUB2	92	53.443	Cercocebus_atys
ENSPMEG00000012913	trub2	88	52.508	ENSCLAG00000001702	TRUB2	91	52.508	Chinchilla_lanigera
ENSPMEG00000012913	trub2	91	50.485	ENSCSAG00000014117	TRUB2	92	50.485	Chlorocebus_sabaeus
ENSPMEG00000012913	trub2	88	51.505	ENSCHOG00000001555	TRUB2	90	51.505	Choloepus_hoffmanni
ENSPMEG00000012913	trub2	96	50.755	ENSCPBG00000025186	TRUB2	97	50.602	Chrysemys_picta_bellii
ENSPMEG00000012913	trub2	78	35.338	ENSCSAVG00000003930	-	81	35.338	Ciona_savignyi
ENSPMEG00000012913	trub2	89	47.508	ENSCANG00000016135	TRUB2	90	47.508	Colobus_angolensis_palliatus
ENSPMEG00000012913	trub2	84	51.943	ENSCGRG00001024441	Trub2	91	50.000	Cricetulus_griseus_chok1gshd
ENSPMEG00000012913	trub2	84	51.943	ENSCGRG00000005633	Trub2	85	51.943	Cricetulus_griseus_crigri
ENSPMEG00000012913	trub2	95	61.875	ENSCSEG00000001331	trub2	95	61.875	Cynoglossus_semilaevis
ENSPMEG00000012913	trub2	99	76.418	ENSCVAG00000009901	trub2	99	76.418	Cyprinodon_variegatus
ENSPMEG00000012913	trub2	90	62.046	ENSDARG00000028379	trub2	86	62.046	Danio_rerio
ENSPMEG00000012913	trub2	88	52.492	ENSDNOG00000045679	-	90	52.492	Dasypus_novemcinctus
ENSPMEG00000012913	trub2	79	37.589	ENSDNOG00000043967	-	85	37.589	Dasypus_novemcinctus
ENSPMEG00000012913	trub2	87	52.787	ENSDORG00000016222	Trub2	95	52.145	Dipodomys_ordii
ENSPMEG00000012913	trub2	85	32.069	FBgn0033060	CG7849	90	32.069	Drosophila_melanogaster
ENSPMEG00000012913	trub2	88	52.881	ENSETEG00000009114	TRUB2	91	52.881	Echinops_telfairi
ENSPMEG00000012913	trub2	65	45.312	ENSEBUG00000015723	trub2	80	45.312	Eptatretus_burgeri
ENSPMEG00000012913	trub2	86	53.925	ENSEASG00005016819	TRUB2	88	53.925	Equus_asinus_asinus
ENSPMEG00000012913	trub2	86	53.925	ENSECAG00000023520	TRUB2	88	53.925	Equus_caballus
ENSPMEG00000012913	trub2	94	50.000	ENSEEUG00000008908	TRUB2	95	50.000	Erinaceus_europaeus
ENSPMEG00000012913	trub2	90	63.924	ENSELUG00000002376	trub2	98	63.924	Esox_lucius
ENSPMEG00000012913	trub2	86	54.608	ENSFCAG00000005839	TRUB2	94	52.614	Felis_catus
ENSPMEG00000012913	trub2	88	48.344	ENSFALG00000001364	TRUB2	97	49.007	Ficedula_albicollis
ENSPMEG00000012913	trub2	88	53.177	ENSFDAG00000021374	TRUB2	95	49.730	Fukomys_damarensis
ENSPMEG00000012913	trub2	100	72.485	ENSFHEG00000014655	trub2	100	72.485	Fundulus_heteroclitus
ENSPMEG00000012913	trub2	87	59.184	ENSGMOG00000000981	trub2	98	59.184	Gadus_morhua
ENSPMEG00000012913	trub2	92	49.375	ENSGALG00000004920	TRUB2	77	50.476	Gallus_gallus
ENSPMEG00000012913	trub2	100	90.828	ENSGAFG00000010107	trub2	100	92.012	Gambusia_affinis
ENSPMEG00000012913	trub2	99	68.468	ENSGACG00000001476	trub2	100	68.468	Gasterosteus_aculeatus
ENSPMEG00000012913	trub2	92	52.090	ENSGAGG00000022872	TRUB2	93	52.077	Gopherus_agassizii
ENSPMEG00000012913	trub2	89	52.492	ENSGGOG00000014780	TRUB2	91	52.492	Gorilla_gorilla
ENSPMEG00000012913	trub2	97	73.089	ENSHBUG00000022384	trub2	98	73.089	Haplochromis_burtoni
ENSPMEG00000012913	trub2	88	51.495	ENSHGLG00000016715	TRUB2	90	51.495	Heterocephalus_glaber_female
ENSPMEG00000012913	trub2	88	51.495	ENSHGLG00100016548	TRUB2	90	51.495	Heterocephalus_glaber_male
ENSPMEG00000012913	trub2	90	73.355	ENSHCOG00000017748	trub2	93	73.355	Hippocampus_comes
ENSPMEG00000012913	trub2	93	58.095	ENSIPUG00000017725	hdhd3	55	58.095	Ictalurus_punctatus
ENSPMEG00000012913	trub2	88	52.492	ENSSTOG00000022617	-	91	52.492	Ictidomys_tridecemlineatus
ENSPMEG00000012913	trub2	88	52.492	ENSSTOG00000008024	-	90	52.492	Ictidomys_tridecemlineatus
ENSPMEG00000012913	trub2	91	45.752	ENSJJAG00000019181	Trub2	92	45.277	Jaculus_jaculus
ENSPMEG00000012913	trub2	89	77.258	ENSKMAG00000007861	trub2	89	77.258	Kryptolebias_marmoratus
ENSPMEG00000012913	trub2	97	68.902	ENSLBEG00000000907	trub2	96	68.902	Labrus_bergylta
ENSPMEG00000012913	trub2	99	49.254	ENSLACG00000001515	TRUB2	99	49.254	Latimeria_chalumnae
ENSPMEG00000012913	trub2	86	60.900	ENSLOCG00000000885	trub2	95	60.900	Lepisosteus_oculatus
ENSPMEG00000012913	trub2	86	52.577	ENSLAFG00000002174	TRUB2	96	52.577	Loxodonta_africana
ENSPMEG00000012913	trub2	91	53.115	ENSMFAG00000000881	TRUB2	92	53.115	Macaca_fascicularis
ENSPMEG00000012913	trub2	91	53.115	ENSMMUG00000014146	TRUB2	92	53.115	Macaca_mulatta
ENSPMEG00000012913	trub2	91	53.115	ENSMNEG00000011189	TRUB2	92	53.115	Macaca_nemestrina
ENSPMEG00000012913	trub2	91	53.115	ENSMLEG00000037270	TRUB2	92	53.115	Mandrillus_leucophaeus
ENSPMEG00000012913	trub2	89	72.425	ENSMAMG00000023643	trub2	99	72.425	Mastacembelus_armatus
ENSPMEG00000012913	trub2	97	72.783	ENSMZEG00005016018	trub2	98	72.783	Maylandia_zebra
ENSPMEG00000012913	trub2	54	57.377	ENSMGAG00000003894	TRUB2	92	57.377	Meleagris_gallopavo
ENSPMEG00000012913	trub2	86	51.546	ENSMAUG00000010403	Trub2	88	51.546	Mesocricetus_auratus
ENSPMEG00000012913	trub2	89	52.824	ENSMICG00000047032	TRUB2	91	52.824	Microcebus_murinus
ENSPMEG00000012913	trub2	86	51.890	ENSMOCG00000014291	Trub2	96	51.890	Microtus_ochrogaster
ENSPMEG00000012913	trub2	94	69.620	ENSMMOG00000021674	trub2	97	69.620	Mola_mola
ENSPMEG00000012913	trub2	87	52.381	ENSMODG00000005940	TRUB2	98	52.381	Monodelphis_domestica
ENSPMEG00000012913	trub2	98	73.494	ENSMALG00000021231	trub2	98	73.494	Monopterus_albus
ENSPMEG00000012913	trub2	84	51.943	MGP_CAROLIEiJ_G0023368	Trub2	88	49.711	Mus_caroli
ENSPMEG00000012913	trub2	84	51.590	ENSMUSG00000039826	Trub2	88	49.123	Mus_musculus
ENSPMEG00000012913	trub2	86	51.546	MGP_PahariEiJ_G0024826	Trub2	88	51.546	Mus_pahari
ENSPMEG00000012913	trub2	84	51.943	MGP_SPRETEiJ_G0024286	Trub2	87	50.588	Mus_spretus
ENSPMEG00000012913	trub2	91	52.273	ENSMPUG00000013206	TRUB2	84	52.273	Mustela_putorius_furo
ENSPMEG00000012913	trub2	88	53.512	ENSMLUG00000005256	TRUB2	90	53.512	Myotis_lucifugus
ENSPMEG00000012913	trub2	82	52.158	ENSNGAG00000018679	Trub2	84	52.158	Nannospalax_galili
ENSPMEG00000012913	trub2	97	71.951	ENSNBRG00000016294	trub2	99	71.951	Neolamprologus_brichardi
ENSPMEG00000012913	trub2	86	53.925	ENSNLEG00000017556	TRUB2	88	53.925	Nomascus_leucogenys
ENSPMEG00000012913	trub2	86	52.941	ENSMEUG00000000484	TRUB2	93	52.941	Notamacropus_eugenii
ENSPMEG00000012913	trub2	88	49.164	ENSOPRG00000001981	TRUB2	91	48.667	Ochotona_princeps
ENSPMEG00000012913	trub2	88	53.512	ENSODEG00000017292	TRUB2	92	53.512	Octodon_degus
ENSPMEG00000012913	trub2	97	72.561	ENSONIG00000004230	trub2	99	72.561	Oreochromis_niloticus
ENSPMEG00000012913	trub2	56	51.596	ENSOANG00000029023	-	83	51.596	Ornithorhynchus_anatinus
ENSPMEG00000012913	trub2	88	52.174	ENSOCUG00000026296	TRUB2	82	52.174	Oryctolagus_cuniculus
ENSPMEG00000012913	trub2	96	70.427	ENSORLG00000020011	trub2	95	70.427	Oryzias_latipes
ENSPMEG00000012913	trub2	95	70.846	ENSORLG00020011028	trub2	90	70.978	Oryzias_latipes_hni
ENSPMEG00000012913	trub2	95	71.160	ENSORLG00015007494	trub2	94	71.609	Oryzias_latipes_hsok
ENSPMEG00000012913	trub2	97	69.605	ENSOMEG00000006702	trub2	99	69.605	Oryzias_melastigma
ENSPMEG00000012913	trub2	86	53.608	ENSOARG00000010579	-	88	53.608	Ovis_aries
ENSPMEG00000012913	trub2	59	56.500	ENSOARG00000003785	-	86	53.456	Ovis_aries
ENSPMEG00000012913	trub2	89	53.156	ENSPPAG00000043146	TRUB2	91	53.156	Pan_paniscus
ENSPMEG00000012913	trub2	88	53.846	ENSPPRG00000006307	TRUB2	94	52.614	Panthera_pardus
ENSPMEG00000012913	trub2	88	54.181	ENSPTIG00000012366	TRUB2	94	52.941	Panthera_tigris_altaica
ENSPMEG00000012913	trub2	89	52.824	ENSPTRG00000052151	-	91	52.824	Pan_troglodytes
ENSPMEG00000012913	trub2	89	52.824	ENSPTRG00000021423	TRUB2	91	52.824	Pan_troglodytes
ENSPMEG00000012913	trub2	91	53.115	ENSPANG00000025856	TRUB2	92	53.115	Papio_anubis
ENSPMEG00000012913	trub2	90	63.934	ENSPKIG00000019769	trub2	99	63.934	Paramormyrops_kingsleyae
ENSPMEG00000012913	trub2	87	50.000	ENSPSIG00000015701	TRUB2	98	50.000	Pelodiscus_sinensis
ENSPMEG00000012913	trub2	86	67.123	ENSPMGG00000010206	trub2	92	67.123	Periophthalmus_magnuspinnatus
ENSPMEG00000012913	trub2	86	51.370	ENSPEMG00000017893	Trub2	91	49.708	Peromyscus_maniculatus_bairdii
ENSPMEG00000012913	trub2	84	54.255	ENSPCIG00000026731	TRUB2	92	54.035	Phascolarctos_cinereus
ENSPMEG00000012913	trub2	100	98.854	ENSPFOG00000018018	trub2	92	98.854	Poecilia_formosa
ENSPMEG00000012913	trub2	100	98.281	ENSPLAG00000010484	trub2	100	98.281	Poecilia_latipinna
ENSPMEG00000012913	trub2	100	95.266	ENSPREG00000002549	trub2	100	95.266	Poecilia_reticulata
ENSPMEG00000012913	trub2	89	52.492	ENSPPYG00000019650	TRUB2	92	52.492	Pongo_abelii
ENSPMEG00000012913	trub2	86	53.952	ENSPCAG00000015068	TRUB2	89	53.952	Procavia_capensis
ENSPMEG00000012913	trub2	89	53.488	ENSPCOG00000017100	TRUB2	91	53.488	Propithecus_coquereli
ENSPMEG00000012913	trub2	81	52.381	ENSPVAG00000001224	TRUB2	91	52.381	Pteropus_vampyrus
ENSPMEG00000012913	trub2	97	73.089	ENSPNYG00000013666	trub2	98	73.089	Pundamilia_nyererei
ENSPMEG00000012913	trub2	100	55.942	ENSPNAG00000017292	trub2	99	55.942	Pygocentrus_nattereri
ENSPMEG00000012913	trub2	86	51.370	ENSRNOG00000043189	Trub2	90	51.370	Rattus_norvegicus
ENSPMEG00000012913	trub2	89	48.837	ENSRBIG00000006965	TRUB2	90	48.837	Rhinopithecus_bieti
ENSPMEG00000012913	trub2	89	53.821	ENSRROG00000042928	TRUB2	91	53.821	Rhinopithecus_roxellana
ENSPMEG00000012913	trub2	82	55.396	ENSSBOG00000022439	TRUB2	84	55.396	Saimiri_boliviensis_boliviensis
ENSPMEG00000012913	trub2	85	63.542	ENSSFOG00015013391	trub2	92	63.542	Scleropages_formosus
ENSPMEG00000012913	trub2	99	69.069	ENSSMAG00000020820	trub2	98	69.069	Scophthalmus_maximus
ENSPMEG00000012913	trub2	97	71.254	ENSSDUG00000016928	trub2	97	71.865	Seriola_dumerili
ENSPMEG00000012913	trub2	97	69.817	ENSSLDG00000024701	trub2	97	70.427	Seriola_lalandi_dorsalis
ENSPMEG00000012913	trub2	86	51.557	ENSSPUG00000015515	TRUB2	86	51.557	Sphenodon_punctatus
ENSPMEG00000012913	trub2	98	71.429	ENSSPAG00000017865	trub2	98	71.429	Stegastes_partitus
ENSPMEG00000012913	trub2	86	52.901	ENSSSCG00000005645	TRUB2	88	52.290	Sus_scrofa
ENSPMEG00000012913	trub2	77	53.257	ENSTGUG00000003704	TRUB2	99	53.257	Taeniopygia_guttata
ENSPMEG00000012913	trub2	91	71.336	ENSTRUG00000015499	trub2	93	71.336	Takifugu_rubripes
ENSPMEG00000012913	trub2	87	70.890	ENSTNIG00000014721	trub2	100	70.890	Tetraodon_nigroviridis
ENSPMEG00000012913	trub2	57	50.785	ENSTBEG00000000586	TRUB2	85	50.785	Tupaia_belangeri
ENSPMEG00000012913	trub2	88	51.163	ENSTTRG00000016486	TRUB2	91	50.662	Tursiops_truncatus
ENSPMEG00000012913	trub2	88	53.535	ENSUAMG00000020276	TRUB2	86	53.535	Ursus_americanus
ENSPMEG00000012913	trub2	88	53.872	ENSUMAG00000022051	TRUB2	86	53.872	Ursus_maritimus
ENSPMEG00000012913	trub2	88	41.806	ENSVPAG00000005793	TRUB2	94	41.806	Vicugna_pacos
ENSPMEG00000012913	trub2	89	51.290	ENSVVUG00000013451	TRUB2	88	51.290	Vulpes_vulpes
ENSPMEG00000012913	trub2	85	53.819	ENSXETG00000003973	trub2	88	53.819	Xenopus_tropicalis
ENSPMEG00000012913	trub2	100	92.899	ENSXCOG00000008759	trub2	100	93.787	Xiphophorus_couchianus
ENSPMEG00000012913	trub2	100	93.491	ENSXMAG00000015478	trub2	100	94.379	Xiphophorus_maculatus