EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000012922 (Gene tree)
Gene ID: 106903331
Gene Symbol: ythdf3
Alias: -
Full Name: YTH N6-methyladenosine RNA binding protein 3
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 9795 bases
Position: chrKQ551049.1:482385-492179
Accession: 106903331
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000010912	YTH	PF04146.15	7.5e-40	1	1
ENSPMEP00000010919	YTH	PF04146.15	8.5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000017904	-	3820	XM_014967048	ENSPMEP00000010919	603 (aa)	XP_014822534	UPI00072E1717
ENSPMET00000017913	-	1680	-	ENSPMEP00000010912	559 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000012922's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000012922's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000012922	ythdf3	97	61.336	ENSPMEG00000023753	ythdf1	97	62.148
ENSPMEG00000012922	ythdf3	100	60.191	ENSPMEG00000014660	ythdf2	99	61.951
ENSPMEG00000012922	ythdf3	99	61.058	ENSPMEG00000020969	-	97	77.273

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000012922	ythdf3	100	94.362	ENSAPOG00000024006	ythdf3	100	94.362	Acanthochromis_polyacanthus
ENSPMEG00000012922	ythdf3	99	93.309	ENSACIG00000022287	ythdf3	98	93.309	Amphilophus_citrinellus
ENSPMEG00000012922	ythdf3	100	94.362	ENSAOCG00000000723	ythdf3	100	94.362	Amphiprion_ocellaris
ENSPMEG00000012922	ythdf3	100	93.864	ENSAPEG00000020352	ythdf3	100	93.864	Amphiprion_percula
ENSPMEG00000012922	ythdf3	99	93.624	ENSATEG00000011478	ythdf3	98	96.410	Anabas_testudineus
ENSPMEG00000012922	ythdf3	51	95.146	ENSACLG00000026145	ythdf3	99	92.574	Astatotilapia_calliptera
ENSPMEG00000012922	ythdf3	98	77.740	ENSAMXG00000030366	ythdf3	100	82.183	Astyanax_mexicanus
ENSPMEG00000012922	ythdf3	99	74.135	ENSCGRG00000005613	-	99	76.776	Cricetulus_griseus_crigri
ENSPMEG00000012922	ythdf3	62	59.041	ENSCGRG00000008289	-	98	52.493	Cricetulus_griseus_crigri
ENSPMEG00000012922	ythdf3	100	91.887	ENSCSEG00000014861	ythdf3	99	91.391	Cynoglossus_semilaevis
ENSPMEG00000012922	ythdf3	100	94.527	ENSCVAG00000018114	ythdf3	100	94.527	Cyprinodon_variegatus
ENSPMEG00000012922	ythdf3	100	79.024	ENSDARG00000057939	ythdf3	100	80.882	Danio_rerio
ENSPMEG00000012922	ythdf3	100	80.906	ENSELUG00000014824	ythdf3	100	81.230	Esox_lucius
ENSPMEG00000012922	ythdf3	100	96.186	ENSFHEG00000016395	ythdf3	100	96.220	Fundulus_heteroclitus
ENSPMEG00000012922	ythdf3	100	81.015	ENSGMOG00000014950	ythdf3	100	80.428	Gadus_morhua
ENSPMEG00000012922	ythdf3	100	97.347	ENSGAFG00000006529	ythdf3	100	97.347	Gambusia_affinis
ENSPMEG00000012922	ythdf3	99	90.532	ENSGACG00000002998	ythdf3	99	90.532	Gasterosteus_aculeatus
ENSPMEG00000012922	ythdf3	99	84.854	ENSHBUG00000018631	ythdf3	99	92.270	Haplochromis_burtoni
ENSPMEG00000012922	ythdf3	99	83.193	ENSHCOG00000015277	ythdf3	99	82.724	Hippocampus_comes
ENSPMEG00000012922	ythdf3	100	78.956	ENSIPUG00000014157	YTHDF1	100	81.463	Ictalurus_punctatus
ENSPMEG00000012922	ythdf3	100	93.399	ENSKMAG00000008447	ythdf3	97	96.774	Kryptolebias_marmoratus
ENSPMEG00000012922	ythdf3	50	94.326	ENSLBEG00000017003	ythdf3	99	87.993	Labrus_bergylta
ENSPMEG00000012922	ythdf3	97	87.629	ENSMAMG00000000414	ythdf3	100	84.880	Mastacembelus_armatus
ENSPMEG00000012922	ythdf3	99	84.854	ENSMZEG00005021836	ythdf3	99	93.688	Maylandia_zebra
ENSPMEG00000012922	ythdf3	66	71.391	ENSMAUG00000012560	Ythdf3	99	72.063	Mesocricetus_auratus
ENSPMEG00000012922	ythdf3	66	53.747	ENSMICG00000009379	-	100	53.396	Microcebus_murinus
ENSPMEG00000012922	ythdf3	97	78.417	ENSMMOG00000003402	ythdf3	98	92.000	Mola_mola
ENSPMEG00000012922	ythdf3	100	93.035	ENSMALG00000000147	ythdf3	100	93.035	Monopterus_albus
ENSPMEG00000012922	ythdf3	100	73.984	MGP_SPRETEiJ_G0025794	Ythdf3	99	75.685	Mus_spretus
ENSPMEG00000012922	ythdf3	99	81.670	ENSNBRG00000023433	ythdf3	99	92.967	Neolamprologus_brichardi
ENSPMEG00000012922	ythdf3	52	79.522	ENSNLEG00000003872	YTHDF3	99	75.514	Nomascus_leucogenys
ENSPMEG00000012922	ythdf3	56	89.744	ENSONIG00000014175	ythdf3	99	93.543	Oreochromis_niloticus
ENSPMEG00000012922	ythdf3	99	73.934	ENSOANG00000005053	YTHDF3	99	76.764	Ornithorhynchus_anatinus
ENSPMEG00000012922	ythdf3	100	91.045	ENSORLG00000008640	ythdf3	100	91.045	Oryzias_latipes
ENSPMEG00000012922	ythdf3	100	91.211	ENSORLG00020014684	ythdf3	100	91.211	Oryzias_latipes_hni
ENSPMEG00000012922	ythdf3	100	91.045	ENSORLG00015014880	ythdf3	100	91.045	Oryzias_latipes_hsok
ENSPMEG00000012922	ythdf3	100	91.542	ENSOMEG00000008212	ythdf3	100	91.542	Oryzias_melastigma
ENSPMEG00000012922	ythdf3	96	80.399	ENSPKIG00000008298	ythdf3	100	80.744	Paramormyrops_kingsleyae
ENSPMEG00000012922	ythdf3	97	86.347	ENSPMGG00000023791	ythdf3	97	85.478	Periophthalmus_magnuspinnatus
ENSPMEG00000012922	ythdf3	100	99.668	ENSPFOG00000006082	ythdf3	100	99.668	Poecilia_formosa
ENSPMEG00000012922	ythdf3	100	99.337	ENSPLAG00000006902	ythdf3	100	99.337	Poecilia_latipinna
ENSPMEG00000012922	ythdf3	100	98.013	ENSPREG00000019781	ythdf3	100	98.013	Poecilia_reticulata
ENSPMEG00000012922	ythdf3	52	90.426	ENSPPYG00000018626	YTHDF3	99	57.725	Pongo_abelii
ENSPMEG00000012922	ythdf3	84	93.085	ENSPVAG00000002740	YTHDF3	86	93.085	Pteropus_vampyrus
ENSPMEG00000012922	ythdf3	98	82.979	ENSPNYG00000002949	ythdf3	99	92.131	Pundamilia_nyererei
ENSPMEG00000012922	ythdf3	97	75.786	ENSSFOG00015015445	ythdf3	96	88.018	Scleropages_formosus
ENSPMEG00000012922	ythdf3	99	89.860	ENSSMAG00000014999	ythdf3	100	91.695	Scophthalmus_maximus
ENSPMEG00000012922	ythdf3	100	94.196	ENSSDUG00000014403	ythdf3	100	94.196	Seriola_dumerili
ENSPMEG00000012922	ythdf3	100	94.196	ENSSLDG00000005029	ythdf3	100	94.196	Seriola_lalandi_dorsalis
ENSPMEG00000012922	ythdf3	99	84.810	ENSSPAG00000001269	ythdf3	99	92.066	Stegastes_partitus
ENSPMEG00000012922	ythdf3	100	89.587	ENSTRUG00000007870	ythdf3	100	89.587	Takifugu_rubripes
ENSPMEG00000012922	ythdf3	100	86.116	ENSTNIG00000012698	ythdf3	100	85.785	Tetraodon_nigroviridis
ENSPMEG00000012922	ythdf3	99	67.919	ENSVPAG00000008104	YTHDF3	86	89.617	Vicugna_pacos
ENSPMEG00000012922	ythdf3	98	75.844	ENSXETG00000021659	ythdf3	99	75.868	Xenopus_tropicalis
ENSPMEG00000012922	ythdf3	99	94.755	ENSXCOG00000009687	ythdf3	99	94.755	Xiphophorus_couchianus
ENSPMEG00000012922	ythdf3	100	97.181	ENSXMAG00000009698	ythdf3	100	97.181	Xiphophorus_maculatus