EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000013085 (Gene tree)
Gene ID: 106925522
Gene Symbol: rab18a
Alias: -
Full Name: ras-related protein Rab-18
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 9338 bases
Position: chrKQ551765.1:32414-41751
Accession: 106925522
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000011062	MMR_HSR1	PF01926.23	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000018078	-	3026	XM_014999921	ENSPMEP00000011062	204 (aa)	XP_014855407	UPI0004444590

Gene Model

Click here to download ENSPMEG00000013085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000013085's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000013085	rab18a	79	46.296	ENSPMEG00000007842	-	74	46.296
ENSPMEG00000013085	rab18a	80	45.294	ENSPMEG00000017161	-	69	45.294
ENSPMEG00000013085	rab18a	83	39.766	ENSPMEG00000014170	rab41	79	39.766
ENSPMEG00000013085	rab18a	71	44.218	ENSPMEG00000003177	rab33a	52	44.218
ENSPMEG00000013085	rab18a	79	45.679	ENSPMEG00000007932	rab11a	75	45.679
ENSPMEG00000013085	rab18a	80	46.341	ENSPMEG00000007165	si:dkey-16l2.16	78	46.341
ENSPMEG00000013085	rab18a	73	35.333	ENSPMEG00000000572	rras	82	35.802
ENSPMEG00000013085	rab18a	96	39.713	ENSPMEG00000000804	rab11al	85	42.391
ENSPMEG00000013085	rab18a	88	43.784	ENSPMEG00000008020	-	90	43.784
ENSPMEG00000013085	rab18a	84	48.256	ENSPMEG00000021947	rab35b	85	48.256
ENSPMEG00000013085	rab18a	82	44.643	ENSPMEG00000021986	rab15	77	44.643
ENSPMEG00000013085	rab18a	82	43.195	ENSPMEG00000000408	RAB15	79	43.195
ENSPMEG00000013085	rab18a	79	32.530	ENSPMEG00000018256	dnajc27	61	32.530
ENSPMEG00000013085	rab18a	80	43.713	ENSPMEG00000012932	si:dkey-34d22.5	75	43.713
ENSPMEG00000013085	rab18a	84	50.867	ENSPMEG00000009701	rab30	84	50.867
ENSPMEG00000013085	rab18a	99	84.314	ENSPMEG00000008223	rab18b	93	85.340
ENSPMEG00000013085	rab18a	75	39.355	ENSPMEG00000019159	si:dkey-13a21.4	76	39.355
ENSPMEG00000013085	rab18a	79	36.145	ENSPMEG00000024399	rab9b	75	36.145
ENSPMEG00000013085	rab18a	85	34.659	ENSPMEG00000002086	rab34a	66	34.659
ENSPMEG00000013085	rab18a	77	30.864	ENSPMEG00000020579	rhebl1	85	30.864
ENSPMEG00000013085	rab18a	62	36.220	ENSPMEG00000010573	-	89	36.220
ENSPMEG00000013085	rab18a	84	35.260	ENSPMEG00000012042	si:ch73-116o1.2	81	35.882
ENSPMEG00000013085	rab18a	81	32.530	ENSPMEG00000020891	hrasb	87	32.530
ENSPMEG00000013085	rab18a	93	45.361	ENSPMEG00000002054	rab1ba	81	49.701
ENSPMEG00000013085	rab18a	71	35.333	ENSPMEG00000015292	rab36	84	35.333
ENSPMEG00000013085	rab18a	80	43.636	ENSPMEG00000011336	rab5c	81	41.667
ENSPMEG00000013085	rab18a	79	46.296	ENSPMEG00000012389	rab11bb	77	46.541
ENSPMEG00000013085	rab18a	83	40.116	ENSPMEG00000007976	-	81	40.116
ENSPMEG00000013085	rab18a	84	38.728	ENSPMEG00000004946	RAB39B	81	38.728
ENSPMEG00000013085	rab18a	80	38.095	ENSPMEG00000010190	RAB9A	77	38.095
ENSPMEG00000013085	rab18a	80	41.212	ENSPMEG00000003743	rab22a	85	41.212
ENSPMEG00000013085	rab18a	86	36.313	ENSPMEG00000004703	rabl2	80	36.313
ENSPMEG00000013085	rab18a	80	41.212	ENSPMEG00000019497	rab42a	76	41.212
ENSPMEG00000013085	rab18a	90	41.799	ENSPMEG00000007238	rab5aa	86	41.799
ENSPMEG00000013085	rab18a	80	39.286	ENSPMEG00000004392	RAB7A	81	39.286
ENSPMEG00000013085	rab18a	75	33.974	ENSPMEG00000013297	rab34b	61	33.974
ENSPMEG00000013085	rab18a	79	45.062	ENSPMEG00000001400	rab25b	77	45.062
ENSPMEG00000013085	rab18a	65	30.075	ENSPMEG00000022138	arl5a	61	30.075
ENSPMEG00000013085	rab18a	80	44.242	ENSPMEG00000012614	-	78	43.407
ENSPMEG00000013085	rab18a	63	34.109	ENSPMEG00000018380	rras2	77	34.109
ENSPMEG00000013085	rab18a	79	36.145	ENSPMEG00000013734	rab9b	75	36.145
ENSPMEG00000013085	rab18a	83	39.181	ENSPMEG00000021872	rab6bb	80	39.181
ENSPMEG00000013085	rab18a	89	44.022	ENSPMEG00000012205	rab4a	86	44.022
ENSPMEG00000013085	rab18a	71	40.816	ENSPMEG00000010152	zgc:101559	63	40.816
ENSPMEG00000013085	rab18a	72	42.105	ENSPMEG00000019646	-	63	42.105
ENSPMEG00000013085	rab18a	80	47.879	ENSPMEG00000006424	-	83	47.059
ENSPMEG00000013085	rab18a	62	36.220	ENSPMEG00000017927	RRAS2	89	36.220
ENSPMEG00000013085	rab18a	57	31.034	ENSPMEG00000000631	arl5c	64	31.034
ENSPMEG00000013085	rab18a	83	40.351	ENSPMEG00000019167	rab6ba	80	40.351
ENSPMEG00000013085	rab18a	77	32.716	ENSPMEG00000014302	rheb	86	32.716
ENSPMEG00000013085	rab18a	93	46.154	ENSPMEG00000005288	-	85	49.711
ENSPMEG00000013085	rab18a	88	43.784	ENSPMEG00000022988	-	90	43.784
ENSPMEG00000013085	rab18a	79	46.296	ENSPMEG00000007917	rab11ba	56	46.296
ENSPMEG00000013085	rab18a	79	51.852	ENSPMEG00000022350	zgc:171927	78	51.852
ENSPMEG00000013085	rab18a	79	35.928	ENSPMEG00000021807	RAB29	81	35.928
ENSPMEG00000013085	rab18a	80	48.780	ENSPMEG00000010857	rab14	76	48.780
ENSPMEG00000013085	rab18a	95	47.449	ENSPMEG00000003046	rab1ab	90	49.180
ENSPMEG00000013085	rab18a	80	37.725	ENSPMEG00000021641	-	81	37.725
ENSPMEG00000013085	rab18a	80	45.294	ENSPMEG00000002564	-	69	45.294
ENSPMEG00000013085	rab18a	79	37.952	ENSPMEG00000023735	rab9a	82	37.952
ENSPMEG00000013085	rab18a	87	39.106	ENSPMEG00000003369	rab6a	84	39.106
ENSPMEG00000013085	rab18a	80	40.828	ENSPMEG00000022709	rab33ba	70	40.828
ENSPMEG00000013085	rab18a	79	47.561	ENSPMEG00000010417	rab12	67	47.561
ENSPMEG00000013085	rab18a	81	32.530	ENSPMEG00000019525	KRAS	93	32.000
ENSPMEG00000013085	rab18a	79	32.927	ENSPMEG00000011210	si:cabz01085950.1	81	32.927
ENSPMEG00000013085	rab18a	84	37.931	ENSPMEG00000017300	rab23	75	38.462
ENSPMEG00000013085	rab18a	79	43.827	ENSPMEG00000005491	rab25a	76	43.827

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000013085	rab18a	100	95.098	ENSAPOG00000010760	rab18a	94	96.335	Acanthochromis_polyacanthus
ENSPMEG00000013085	rab18a	100	84.314	ENSACIG00000009617	rab18a	93	84.817	Amphilophus_citrinellus
ENSPMEG00000013085	rab18a	100	95.588	ENSAOCG00000016233	rab18a	94	96.859	Amphiprion_ocellaris
ENSPMEG00000013085	rab18a	100	95.588	ENSAPEG00000005392	rab18a	94	96.859	Amphiprion_percula
ENSPMEG00000013085	rab18a	100	93.627	ENSATEG00000021911	rab18a	94	94.764	Anabas_testudineus
ENSPMEG00000013085	rab18a	100	87.317	ENSACAG00000005463	-	94	88.542	Anolis_carolinensis
ENSPMEG00000013085	rab18a	100	95.098	ENSACLG00000011484	rab18a	100	95.098	Astatotilapia_calliptera
ENSPMEG00000013085	rab18a	96	69.154	ENSCPBG00000027619	-	94	70.899	Chrysemys_picta_bellii
ENSPMEG00000013085	rab18a	100	86.893	ENSCPBG00000015839	-	93	87.958	Chrysemys_picta_bellii
ENSPMEG00000013085	rab18a	97	74.874	ENSCING00000006838	-	90	79.444	Ciona_intestinalis
ENSPMEG00000013085	rab18a	97	73.869	ENSCSAVG00000010348	-	94	76.064	Ciona_savignyi
ENSPMEG00000013085	rab18a	100	93.627	ENSCSEG00000011816	rab18a	94	95.288	Cynoglossus_semilaevis
ENSPMEG00000013085	rab18a	100	97.549	ENSCVAG00000015451	rab18a	100	97.549	Cyprinodon_variegatus
ENSPMEG00000013085	rab18a	100	81.463	ENSDARG00000055291	rab18a	92	84.656	Danio_rerio
ENSPMEG00000013085	rab18a	100	89.756	ENSELUG00000003805	rab18a	93	91.623	Esox_lucius
ENSPMEG00000013085	rab18a	100	97.549	ENSFHEG00000019455	rab18a	100	97.549	Fundulus_heteroclitus
ENSPMEG00000013085	rab18a	100	99.020	ENSGAFG00000002790	rab18a	100	99.020	Gambusia_affinis
ENSPMEG00000013085	rab18a	100	86.893	ENSGAGG00000015642	-	93	87.958	Gopherus_agassizii
ENSPMEG00000013085	rab18a	100	95.098	ENSHBUG00000001518	rab18a	100	95.098	Haplochromis_burtoni
ENSPMEG00000013085	rab18a	99	95.074	ENSLBEG00000005861	rab18a	90	95.812	Labrus_bergylta
ENSPMEG00000013085	rab18a	93	88.421	ENSLACG00000009310	rab18a	92	88.421	Latimeria_chalumnae
ENSPMEG00000013085	rab18a	100	88.780	ENSLOCG00000007491	rab18a	93	90.052	Lepisosteus_oculatus
ENSPMEG00000013085	rab18a	100	92.157	ENSMAMG00000014320	rab18a	94	93.717	Mastacembelus_armatus
ENSPMEG00000013085	rab18a	100	94.608	ENSMZEG00005017235	rab18a	94	96.335	Maylandia_zebra
ENSPMEG00000013085	rab18a	100	94.118	ENSMALG00000009813	rab18a	94	95.288	Monopterus_albus
ENSPMEG00000013085	rab18a	100	95.098	ENSNBRG00000013507	rab18a	100	95.098	Neolamprologus_brichardi
ENSPMEG00000013085	rab18a	94	96.354	ENSORLG00000004624	rab18a	94	96.335	Oryzias_latipes
ENSPMEG00000013085	rab18a	94	96.875	ENSORLG00020008333	rab18a	94	96.859	Oryzias_latipes_hni
ENSPMEG00000013085	rab18a	94	95.833	ENSORLG00015004739	rab18a	94	95.812	Oryzias_latipes_hsok
ENSPMEG00000013085	rab18a	100	95.588	ENSOMEG00000020605	rab18a	100	95.588	Oryzias_melastigma
ENSPMEG00000013085	rab18a	100	88.293	ENSPKIG00000009825	rab18a	92	90.476	Paramormyrops_kingsleyae
ENSPMEG00000013085	rab18a	100	93.627	ENSPMGG00000020409	-	94	94.241	Periophthalmus_magnuspinnatus
ENSPMEG00000013085	rab18a	100	100.000	ENSPFOG00000007571	rab18a	100	100.000	Poecilia_formosa
ENSPMEG00000013085	rab18a	100	100.000	ENSPLAG00000010104	rab18a	100	100.000	Poecilia_latipinna
ENSPMEG00000013085	rab18a	100	100.000	ENSPREG00000005923	rab18a	83	100.000	Poecilia_reticulata
ENSPMEG00000013085	rab18a	100	95.098	ENSPNYG00000007064	rab18a	100	95.098	Pundamilia_nyererei
ENSPMEG00000013085	rab18a	99	80.597	ENSPNAG00000011548	rab18a	95	83.684	Pygocentrus_nattereri
ENSPMEG00000013085	rab18a	100	89.268	ENSSFOG00015017444	rab18a	78	91.579	Scleropages_formosus
ENSPMEG00000013085	rab18a	94	92.746	ENSSMAG00000002969	rab18a	94	92.708	Scophthalmus_maximus
ENSPMEG00000013085	rab18a	94	95.312	ENSSDUG00000003823	rab18a	94	95.288	Seriola_dumerili
ENSPMEG00000013085	rab18a	94	95.312	ENSSLDG00000006977	rab18a	94	95.288	Seriola_lalandi_dorsalis
ENSPMEG00000013085	rab18a	93	88.889	ENSSPUG00000017677	-	92	88.421	Sphenodon_punctatus
ENSPMEG00000013085	rab18a	100	91.176	ENSTRUG00000004984	rab18a	94	92.147	Takifugu_rubripes
ENSPMEG00000013085	rab18a	100	88.350	ENSUMAG00000015574	-	91	89.894	Ursus_maritimus
ENSPMEG00000013085	rab18a	100	86.893	ENSXETG00000004556	rab18	93	89.529	Xenopus_tropicalis
ENSPMEG00000013085	rab18a	100	99.510	ENSXMAG00000024122	rab18a	100	99.510	Xiphophorus_maculatus