EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000013096 (Gene tree)
Gene ID: 106924130
Gene Symbol: si:ch1073-385f13.3 (1 of many)
Alias: -
Full Name: DNA polymerase III PolC-type-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 6638 bases
Position: chrKQ551658.1:113425-120062
Accession: 106924130
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000028187	RNase_T	PF00929.24	5.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000018094	-	1667	XM_014997682	ENSPMEP00000028187	197 (aa)	XP_014853168	UPI00072E0F29

Gene Model

Click here to download ENSPMEG00000013096's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000013096's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000013096	si:ch1073-385f13.3	97	78.125	ENSPMEG00000013087	si:ch1073-385f13.3	100	78.125

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000013096	si:ch1073-385f13.3	88	38.286	ENSAOCG00000011593	si:ch1073-296i8.2	62	38.286	Amphiprion_ocellaris
ENSPMEG00000013096	si:ch1073-385f13.3	88	38.286	ENSAPEG00000012492	si:ch1073-296i8.2	62	38.286	Amphiprion_percula
ENSPMEG00000013096	si:ch1073-385f13.3	96	36.458	ENSATEG00000021547	si:ch1073-296i8.2	75	36.458	Anabas_testudineus
ENSPMEG00000013096	si:ch1073-385f13.3	99	58.974	ENSATEG00000021542	si:ch1073-385f13.3	100	58.974	Anabas_testudineus
ENSPMEG00000013096	si:ch1073-385f13.3	90	60.452	ENSACLG00000023991	-	54	60.452	Astatotilapia_calliptera
ENSPMEG00000013096	si:ch1073-385f13.3	95	64.894	ENSCVAG00000001533	-	96	64.894	Cyprinodon_variegatus
ENSPMEG00000013096	si:ch1073-385f13.3	94	43.085	ENSDARG00000093773	si:ch1073-296i8.2	79	43.085	Danio_rerio
ENSPMEG00000013096	si:ch1073-385f13.3	96	42.188	ENSDARG00000092584	si:ch1073-385f13.3	78	42.188	Danio_rerio
ENSPMEG00000013096	si:ch1073-385f13.3	95	39.153	ENSFHEG00000018188	si:ch1073-296i8.2	76	39.153	Fundulus_heteroclitus
ENSPMEG00000013096	si:ch1073-385f13.3	99	62.755	ENSFHEG00000018181	-	99	62.755	Fundulus_heteroclitus
ENSPMEG00000013096	si:ch1073-385f13.3	88	44.318	ENSGMOG00000019335	si:ch1073-296i8.2	98	44.318	Gadus_morhua
ENSPMEG00000013096	si:ch1073-385f13.3	93	54.645	ENSGMOG00000019565	-	97	54.645	Gadus_morhua
ENSPMEG00000013096	si:ch1073-385f13.3	88	41.477	ENSGACG00000007185	si:ch1073-296i8.2	97	41.477	Gasterosteus_aculeatus
ENSPMEG00000013096	si:ch1073-385f13.3	98	63.731	ENSHBUG00000007541	si:ch1073-385f13.3	98	63.731	Haplochromis_burtoni
ENSPMEG00000013096	si:ch1073-385f13.3	95	39.474	ENSHCOG00000008574	si:ch1073-296i8.2	79	39.474	Hippocampus_comes
ENSPMEG00000013096	si:ch1073-385f13.3	96	40.838	ENSKMAG00000015660	si:ch1073-296i8.2	85	40.838	Kryptolebias_marmoratus
ENSPMEG00000013096	si:ch1073-385f13.3	98	60.309	ENSKMAG00000015669	-	98	60.309	Kryptolebias_marmoratus
ENSPMEG00000013096	si:ch1073-385f13.3	89	43.575	ENSLBEG00000019623	si:ch1073-296i8.2	70	43.575	Labrus_bergylta
ENSPMEG00000013096	si:ch1073-385f13.3	91	54.144	ENSLOCG00000014933	-	90	54.144	Lepisosteus_oculatus
ENSPMEG00000013096	si:ch1073-385f13.3	92	58.011	ENSMAMG00000023075	si:ch1073-385f13.3	93	58.011	Mastacembelus_armatus
ENSPMEG00000013096	si:ch1073-385f13.3	72	39.161	ENSMMOG00000018979	si:ch1073-296i8.2	67	39.161	Mola_mola
ENSPMEG00000013096	si:ch1073-385f13.3	95	59.358	ENSMALG00000015952	si:ch1073-385f13.3	96	59.358	Monopterus_albus
ENSPMEG00000013096	si:ch1073-385f13.3	98	62.176	ENSONIG00000012794	si:ch1073-385f13.3	98	62.176	Oreochromis_niloticus
ENSPMEG00000013096	si:ch1073-385f13.3	98	62.887	ENSORLG00000030645	si:ch1073-385f13.3	88	62.887	Oryzias_latipes
ENSPMEG00000013096	si:ch1073-385f13.3	96	38.220	ENSORLG00000023958	si:ch1073-296i8.2	86	38.220	Oryzias_latipes
ENSPMEG00000013096	si:ch1073-385f13.3	96	38.220	ENSORLG00020021912	si:ch1073-296i8.2	86	38.220	Oryzias_latipes_hni
ENSPMEG00000013096	si:ch1073-385f13.3	98	62.371	ENSORLG00020021903	-	99	62.371	Oryzias_latipes_hni
ENSPMEG00000013096	si:ch1073-385f13.3	96	38.220	ENSORLG00015015303	si:ch1073-296i8.2	86	38.220	Oryzias_latipes_hsok
ENSPMEG00000013096	si:ch1073-385f13.3	96	48.705	ENSPKIG00000023552	-	89	48.705	Paramormyrops_kingsleyae
ENSPMEG00000013096	si:ch1073-385f13.3	99	98.462	ENSPFOG00000005521	si:ch1073-385f13.3	99	98.462	Poecilia_formosa
ENSPMEG00000013096	si:ch1073-385f13.3	94	80.108	ENSPFOG00000021742	-	98	80.108	Poecilia_formosa
ENSPMEG00000013096	si:ch1073-385f13.3	93	71.564	ENSPREG00000013537	-	80	71.564	Poecilia_reticulata
ENSPMEG00000013096	si:ch1073-385f13.3	88	47.701	ENSPNAG00000018956	si:ch1073-385f13.3	92	47.701	Pygocentrus_nattereri
ENSPMEG00000013096	si:ch1073-385f13.3	95	39.683	ENSSMAG00000004874	si:ch1073-296i8.2	72	39.683	Scophthalmus_maximus
ENSPMEG00000013096	si:ch1073-385f13.3	97	61.257	ENSSLDG00000002379	si:ch1073-385f13.3	97	61.257	Seriola_lalandi_dorsalis
ENSPMEG00000013096	si:ch1073-385f13.3	95	39.153	ENSSPAG00000012797	si:ch1073-296i8.2	96	39.153	Stegastes_partitus
ENSPMEG00000013096	si:ch1073-385f13.3	92	39.130	ENSTNIG00000010399	si:ch1073-296i8.2	80	39.130	Tetraodon_nigroviridis
ENSPMEG00000013096	si:ch1073-385f13.3	100	84.772	ENSXMAG00000021869	si:ch1073-385f13.3	100	84.772	Xiphophorus_maculatus