EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000013247 (Gene tree)
Gene ID: -
Gene Symbol: msi2a (1 of many)
Alias: -
Full Name: RNA-binding protein Musashi homolog 2-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 109695 bases
Position: chrKQ552417.1:26698-136392
Accession: 106931926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000011188	RRM_1	PF00076.22	4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000018254	-	486	XM_015010326	ENSPMEP00000011188	161 (aa)	XP_014865812	-

Gene Model

Click here to download ENSPMEG00000013247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000013247's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000013247	msi2a	69	37.500	ENSPMEG00000017025	HNRNPA0	92	37.500
ENSPMEG00000013247	msi2a	75	69.853	ENSPMEG00000012796	MSI1	57	69.853
ENSPMEG00000013247	msi2a	72	48.696	ENSPMEG00000023285	-	63	48.696
ENSPMEG00000013247	msi2a	71	40.517	ENSPMEG00000002425	-	57	41.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000013247	msi2a	62	100.000	ENSG00000153944	MSI2	79	88.288	Homo_sapiens
ENSPMEG00000013247	msi2a	75	100.000	ENSAPOG00000001658	msi2a	56	100.000	Acanthochromis_polyacanthus
ENSPMEG00000013247	msi2a	89	86.755	ENSAOCG00000014822	msi2a	77	86.755	Amphiprion_ocellaris
ENSPMEG00000013247	msi2a	75	100.000	ENSAPEG00000007706	msi2a	56	100.000	Amphiprion_percula
ENSPMEG00000013247	msi2a	66	88.172	ENSATEG00000003301	-	50	88.172	Anabas_testudineus
ENSPMEG00000013247	msi2a	75	100.000	ENSATEG00000010498	msi2a	56	100.000	Anabas_testudineus
ENSPMEG00000013247	msi2a	62	100.000	ENSANAG00000037827	MSI2	70	82.645	Aotus_nancymaae
ENSPMEG00000013247	msi2a	75	100.000	ENSACLG00000007752	msi2a	56	100.000	Astatotilapia_calliptera
ENSPMEG00000013247	msi2a	80	81.818	ENSAMXG00000032796	msi2a	58	81.818	Astyanax_mexicanus
ENSPMEG00000013247	msi2a	80	91.406	ENSAMXG00000010474	msi2b	56	91.406	Astyanax_mexicanus
ENSPMEG00000013247	msi2a	69	88.288	ENSBTAG00000004406	MSI2	59	76.923	Bos_taurus
ENSPMEG00000013247	msi2a	66	66.355	WBGene00003423	msi-1	59	66.355	Caenorhabditis_elegans
ENSPMEG00000013247	msi2a	80	79.720	ENSCJAG00000013998	MSI2	70	82.645	Callithrix_jacchus
ENSPMEG00000013247	msi2a	62	95.960	ENSCAFG00020025620	MSI2	51	96.000	Canis_lupus_dingo
ENSPMEG00000013247	msi2a	80	76.923	ENSCHIG00000016580	MSI2	58	76.923	Capra_hircus
ENSPMEG00000013247	msi2a	62	81.111	ENSCPOG00000034042	MSI2	51	81.111	Cavia_porcellus
ENSPMEG00000013247	msi2a	62	100.000	ENSCCAG00000033927	MSI2	70	82.645	Cebus_capucinus
ENSPMEG00000013247	msi2a	62	96.970	ENSCATG00000040879	MSI2	70	82.645	Cercocebus_atys
ENSPMEG00000013247	msi2a	80	79.720	ENSCLAG00000014325	MSI2	87	74.107	Chinchilla_lanigera
ENSPMEG00000013247	msi2a	80	79.720	ENSCSAG00000005633	MSI2	58	79.720	Chlorocebus_sabaeus
ENSPMEG00000013247	msi2a	62	96.000	ENSCPBG00000009942	MSI2	58	96.000	Chrysemys_picta_bellii
ENSPMEG00000013247	msi2a	73	57.937	ENSCSAVG00000010397	-	56	57.480	Ciona_savignyi
ENSPMEG00000013247	msi2a	62	96.970	ENSCANG00000036414	MSI2	70	82.645	Colobus_angolensis_palliatus
ENSPMEG00000013247	msi2a	80	79.021	ENSCGRG00001013330	Msi2	74	75.472	Cricetulus_griseus_chok1gshd
ENSPMEG00000013247	msi2a	78	80.147	ENSCSEG00000003266	-	59	77.857	Cynoglossus_semilaevis
ENSPMEG00000013247	msi2a	77	84.892	ENSCSEG00000013549	msi2a	79	84.892	Cynoglossus_semilaevis
ENSPMEG00000013247	msi2a	75	100.000	ENSCVAG00000017075	msi2a	58	100.000	Cyprinodon_variegatus
ENSPMEG00000013247	msi2a	80	83.217	ENSDARG00000032614	msi2b	100	96.429	Danio_rerio
ENSPMEG00000013247	msi2a	66	90.291	ENSDNOG00000014501	MSI2	52	90.291	Dasypus_novemcinctus
ENSPMEG00000013247	msi2a	68	88.182	ENSDORG00000028440	-	97	88.182	Dipodomys_ordii
ENSPMEG00000013247	msi2a	62	81.250	FBgn0260943	Rbp6	53	81.250	Drosophila_melanogaster
ENSPMEG00000013247	msi2a	80	79.720	ENSECAG00000011435	MSI2	60	79.720	Equus_caballus
ENSPMEG00000013247	msi2a	80	91.473	ENSELUG00000001361	msi2b	80	85.294	Esox_lucius
ENSPMEG00000013247	msi2a	80	92.969	ENSELUG00000011747	msi2a	56	92.969	Esox_lucius
ENSPMEG00000013247	msi2a	80	79.720	ENSFCAG00000041686	MSI2	91	74.444	Felis_catus
ENSPMEG00000013247	msi2a	75	76.154	ENSFCAG00000033787	-	83	68.041	Felis_catus
ENSPMEG00000013247	msi2a	75	100.000	ENSFHEG00000000084	msi2a	86	88.971	Fundulus_heteroclitus
ENSPMEG00000013247	msi2a	55	82.692	ENSGMOG00000007596	-	100	82.692	Gadus_morhua
ENSPMEG00000013247	msi2a	80	78.322	ENSGALG00000005567	MSI2	55	78.322	Gallus_gallus
ENSPMEG00000013247	msi2a	75	100.000	ENSGAFG00000006974	msi2a	81	88.971	Gambusia_affinis
ENSPMEG00000013247	msi2a	62	96.970	ENSGGOG00000013182	MSI2	70	82.645	Gorilla_gorilla
ENSPMEG00000013247	msi2a	75	100.000	ENSHBUG00000020800	msi2a	83	79.487	Haplochromis_burtoni
ENSPMEG00000013247	msi2a	57	77.143	ENSHGLG00000012444	MSI2	77	77.143	Heterocephalus_glaber_female
ENSPMEG00000013247	msi2a	74	83.193	ENSHGLG00100004028	-	91	83.193	Heterocephalus_glaber_male
ENSPMEG00000013247	msi2a	75	88.235	ENSHCOG00000000266	msi2a	54	88.235	Hippocampus_comes
ENSPMEG00000013247	msi2a	80	82.031	ENSIPUG00000003732	msi2b	55	82.031	Ictalurus_punctatus
ENSPMEG00000013247	msi2a	80	89.062	ENSIPUG00000021097	msi2a	56	89.062	Ictalurus_punctatus
ENSPMEG00000013247	msi2a	62	81.111	ENSSTOG00000007884	MSI2	51	81.111	Ictidomys_tridecemlineatus
ENSPMEG00000013247	msi2a	68	88.182	ENSJJAG00000009467	-	97	88.182	Jaculus_jaculus
ENSPMEG00000013247	msi2a	75	99.174	ENSKMAG00000009494	msi2a	58	88.235	Kryptolebias_marmoratus
ENSPMEG00000013247	msi2a	75	100.000	ENSLBEG00000007061	msi2a	88	88.889	Labrus_bergylta
ENSPMEG00000013247	msi2a	80	83.217	ENSLOCG00000004675	msi2b	100	74.797	Lepisosteus_oculatus
ENSPMEG00000013247	msi2a	62	96.970	ENSMFAG00000003775	MSI2	70	82.645	Macaca_fascicularis
ENSPMEG00000013247	msi2a	62	96.970	ENSMMUG00000002069	MSI2	70	82.645	Macaca_mulatta
ENSPMEG00000013247	msi2a	80	79.720	ENSMNEG00000045275	MSI2	70	82.645	Macaca_nemestrina
ENSPMEG00000013247	msi2a	62	96.970	ENSMLEG00000033888	MSI2	70	82.645	Mandrillus_leucophaeus
ENSPMEG00000013247	msi2a	75	100.000	ENSMAMG00000010503	msi2a	96	78.846	Mastacembelus_armatus
ENSPMEG00000013247	msi2a	80	89.062	ENSMAMG00000002488	-	93	79.720	Mastacembelus_armatus
ENSPMEG00000013247	msi2a	75	100.000	ENSMZEG00005007676	msi2a	56	100.000	Maylandia_zebra
ENSPMEG00000013247	msi2a	80	79.021	ENSMAUG00000003862	Msi2	55	79.021	Mesocricetus_auratus
ENSPMEG00000013247	msi2a	80	79.720	ENSMICG00000013598	-	70	82.645	Microcebus_murinus
ENSPMEG00000013247	msi2a	94	62.130	ENSMICG00000032913	-	61	64.894	Microcebus_murinus
ENSPMEG00000013247	msi2a	80	79.021	ENSMOCG00000005820	Msi2	55	79.021	Microtus_ochrogaster
ENSPMEG00000013247	msi2a	75	100.000	ENSMMOG00000008348	msi2a	79	100.000	Mola_mola
ENSPMEG00000013247	msi2a	75	100.000	ENSMALG00000000071	msi2a	81	87.591	Monopterus_albus
ENSPMEG00000013247	msi2a	80	79.021	MGP_CAROLIEiJ_G0016948	Msi2	97	88.182	Mus_caroli
ENSPMEG00000013247	msi2a	80	79.021	ENSMUSG00000069769	Msi2	97	88.182	Mus_musculus
ENSPMEG00000013247	msi2a	80	79.021	MGP_PahariEiJ_G0018079	Msi2	97	88.182	Mus_pahari
ENSPMEG00000013247	msi2a	80	79.021	MGP_SPRETEiJ_G0017795	Msi2	97	88.182	Mus_spretus
ENSPMEG00000013247	msi2a	73	83.898	ENSMPUG00000015377	MSI2	51	83.898	Mustela_putorius_furo
ENSPMEG00000013247	msi2a	73	83.898	ENSMLUG00000007865	MSI2	51	83.898	Myotis_lucifugus
ENSPMEG00000013247	msi2a	80	79.021	ENSNGAG00000017807	Msi2	55	79.021	Nannospalax_galili
ENSPMEG00000013247	msi2a	75	100.000	ENSNBRG00000014596	msi2a	82	88.971	Neolamprologus_brichardi
ENSPMEG00000013247	msi2a	62	96.970	ENSNLEG00000008059	MSI2	70	96.000	Nomascus_leucogenys
ENSPMEG00000013247	msi2a	80	79.720	ENSODEG00000011974	MSI2	55	79.720	Octodon_degus
ENSPMEG00000013247	msi2a	75	88.971	ENSONIG00000001972	msi2a	76	88.971	Oreochromis_niloticus
ENSPMEG00000013247	msi2a	73	83.898	ENSOCUG00000010440	MSI2	51	83.898	Oryctolagus_cuniculus
ENSPMEG00000013247	msi2a	75	93.388	ENSORLG00000009671	msi2a	62	88.971	Oryzias_latipes
ENSPMEG00000013247	msi2a	75	93.388	ENSORLG00020021556	msi2a	62	88.971	Oryzias_latipes_hni
ENSPMEG00000013247	msi2a	75	93.388	ENSORLG00015004592	msi2a	62	88.971	Oryzias_latipes_hsok
ENSPMEG00000013247	msi2a	75	88.971	ENSOMEG00000000146	msi2a	62	88.971	Oryzias_melastigma
ENSPMEG00000013247	msi2a	75	82.645	ENSPPAG00000037697	MSI2	70	82.645	Pan_paniscus
ENSPMEG00000013247	msi2a	75	82.645	ENSPPRG00000001848	MSI2	70	82.645	Panthera_pardus
ENSPMEG00000013247	msi2a	85	60.135	ENSPTIG00000021873	-	77	60.135	Panthera_tigris_altaica
ENSPMEG00000013247	msi2a	62	96.000	ENSPTIG00000021678	MSI2	61	96.000	Panthera_tigris_altaica
ENSPMEG00000013247	msi2a	62	96.970	ENSPTRG00000009437	MSI2	70	82.645	Pan_troglodytes
ENSPMEG00000013247	msi2a	80	79.720	ENSPANG00000022319	MSI2	70	82.645	Papio_anubis
ENSPMEG00000013247	msi2a	91	79.021	ENSPKIG00000007038	-	78	79.021	Paramormyrops_kingsleyae
ENSPMEG00000013247	msi2a	75	100.000	ENSPMGG00000005888	msi2a	56	100.000	Periophthalmus_magnuspinnatus
ENSPMEG00000013247	msi2a	68	88.182	ENSPEMG00000021793	-	97	88.182	Peromyscus_maniculatus_bairdii
ENSPMEG00000013247	msi2a	80	81.818	ENSPCIG00000006063	MSI2	54	81.818	Phascolarctos_cinereus
ENSPMEG00000013247	msi2a	56	84.762	ENSPFOG00000019337	MSI2	91	84.762	Poecilia_formosa
ENSPMEG00000013247	msi2a	100	89.773	ENSPLAG00000000436	msi2a	94	89.773	Poecilia_latipinna
ENSPMEG00000013247	msi2a	75	100.000	ENSPREG00000000881	msi2a	55	100.000	Poecilia_reticulata
ENSPMEG00000013247	msi2a	69	88.288	ENSPCOG00000019195	-	76	88.288	Propithecus_coquereli
ENSPMEG00000013247	msi2a	66	90.654	ENSPVAG00000017053	MSI2	53	90.654	Pteropus_vampyrus
ENSPMEG00000013247	msi2a	75	100.000	ENSPNYG00000018393	msi2a	56	100.000	Pundamilia_nyererei
ENSPMEG00000013247	msi2a	80	90.625	ENSPNAG00000014957	msi2a	56	90.625	Pygocentrus_nattereri
ENSPMEG00000013247	msi2a	80	91.406	ENSPNAG00000000844	msi2b	56	91.406	Pygocentrus_nattereri
ENSPMEG00000013247	msi2a	66	89.247	ENSRNOG00000025338	Msi2	50	89.247	Rattus_norvegicus
ENSPMEG00000013247	msi2a	68	88.182	ENSRROG00000034421	-	84	88.182	Rhinopithecus_roxellana
ENSPMEG00000013247	msi2a	62	100.000	ENSSBOG00000026425	MSI2	70	82.645	Saimiri_boliviensis_boliviensis
ENSPMEG00000013247	msi2a	73	84.746	ENSSHAG00000008672	MSI2	86	55.000	Sarcophilus_harrisii
ENSPMEG00000013247	msi2a	73	82.203	ENSSFOG00015021687	-	59	82.203	Scleropages_formosus
ENSPMEG00000013247	msi2a	75	100.000	ENSSMAG00000018484	msi2a	56	100.000	Scophthalmus_maximus
ENSPMEG00000013247	msi2a	80	81.429	ENSSDUG00000021968	-	94	79.720	Seriola_dumerili
ENSPMEG00000013247	msi2a	75	100.000	ENSSDUG00000014507	msi2a	82	88.889	Seriola_dumerili
ENSPMEG00000013247	msi2a	75	100.000	ENSSLDG00000017172	msi2a	56	100.000	Seriola_lalandi_dorsalis
ENSPMEG00000013247	msi2a	80	81.119	ENSSPUG00000000913	-	85	81.119	Sphenodon_punctatus
ENSPMEG00000013247	msi2a	75	88.971	ENSSPAG00000017793	msi2a	62	88.971	Stegastes_partitus
ENSPMEG00000013247	msi2a	80	79.720	ENSSSCG00000038505	MSI2	62	79.720	Sus_scrofa
ENSPMEG00000013247	msi2a	75	88.971	ENSTRUG00000021248	msi2a	59	84.615	Takifugu_rubripes
ENSPMEG00000013247	msi2a	75	82.645	ENSUAMG00000000700	MSI2	70	82.645	Ursus_americanus
ENSPMEG00000013247	msi2a	66	89.247	ENSUMAG00000000505	MSI2	54	89.247	Ursus_maritimus
ENSPMEG00000013247	msi2a	80	79.720	ENSVVUG00000011783	MSI2	55	79.720	Vulpes_vulpes
ENSPMEG00000013247	msi2a	75	100.000	ENSXMAG00000000608	msi2a	58	100.000	Xiphophorus_maculatus