EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000013297 (Gene tree)
Gene ID: 106910708
Gene Symbol: rab34b
Alias: -
Full Name: RAB34%2C member RAS oncogene family
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 7506 bases
Position: chrKQ551073.1:498811-506316
Accession: 106910708
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000011251	MMR_HSR1	PF01926.23	9.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000018328	-	2225	XM_014977383	ENSPMEP00000011251	254 (aa)	XP_014832869	UPI000444844A

Gene Model

Click here to download ENSPMEG00000013297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000013297's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000013297	rab34b	65	38.182	ENSPMEG00000007976	-	77	38.182
ENSPMEG00000013297	rab34b	50	47.656	ENSPMEG00000010152	zgc:101559	54	47.656
ENSPMEG00000013297	rab34b	70	31.461	ENSPMEG00000008223	rab18b	85	31.461
ENSPMEG00000013297	rab34b	66	38.323	ENSPMEG00000006424	-	83	40.580
ENSPMEG00000013297	rab34b	70	58.659	ENSPMEG00000015292	rab36	97	58.659
ENSPMEG00000013297	rab34b	63	36.250	ENSPMEG00000010417	rab12	64	36.250
ENSPMEG00000013297	rab34b	63	31.875	ENSPMEG00000012614	-	70	31.875
ENSPMEG00000013297	rab34b	71	33.880	ENSPMEG00000019497	rab42a	83	33.880
ENSPMEG00000013297	rab34b	72	30.108	ENSPMEG00000004392	RAB7A	89	30.108
ENSPMEG00000013297	rab34b	63	30.625	ENSPMEG00000003743	rab22a	81	30.625
ENSPMEG00000013297	rab34b	76	35.233	ENSPMEG00000021986	rab15	85	35.233
ENSPMEG00000013297	rab34b	83	32.558	ENSPMEG00000007165	si:dkey-16l2.16	99	32.558
ENSPMEG00000013297	rab34b	81	33.816	ENSPMEG00000017161	-	79	33.816
ENSPMEG00000013297	rab34b	80	30.952	ENSPMEG00000007842	-	93	30.952
ENSPMEG00000013297	rab34b	70	34.078	ENSPMEG00000012205	rab4a	83	34.078
ENSPMEG00000013297	rab34b	67	35.503	ENSPMEG00000002054	rab1ba	81	35.503
ENSPMEG00000013297	rab34b	63	40.994	ENSPMEG00000014170	rab41	75	40.994
ENSPMEG00000013297	rab34b	72	33.333	ENSPMEG00000007917	rab11ba	59	33.333
ENSPMEG00000013297	rab34b	80	33.649	ENSPMEG00000012932	si:dkey-34d22.5	95	33.649
ENSPMEG00000013297	rab34b	80	36.275	ENSPMEG00000022350	zgc:171927	94	36.275
ENSPMEG00000013297	rab34b	61	33.974	ENSPMEG00000013085	rab18a	75	33.974
ENSPMEG00000013297	rab34b	63	39.375	ENSPMEG00000008020	-	79	39.375
ENSPMEG00000013297	rab34b	69	31.638	ENSPMEG00000021641	-	85	31.638
ENSPMEG00000013297	rab34b	63	37.267	ENSPMEG00000005288	-	78	37.267
ENSPMEG00000013297	rab34b	80	35.610	ENSPMEG00000021947	rab35b	96	35.122
ENSPMEG00000013297	rab34b	71	37.569	ENSPMEG00000019167	rab6ba	86	37.569
ENSPMEG00000013297	rab34b	80	35.238	ENSPMEG00000003177	rab33a	70	35.238
ENSPMEG00000013297	rab34b	62	35.404	ENSPMEG00000024399	rab9b	72	35.404
ENSPMEG00000013297	rab34b	66	38.323	ENSPMEG00000010857	rab14	76	38.323
ENSPMEG00000013297	rab34b	66	36.905	ENSPMEG00000000408	RAB15	79	36.905
ENSPMEG00000013297	rab34b	59	36.913	ENSPMEG00000017300	rab23	70	40.136
ENSPMEG00000013297	rab34b	62	35.404	ENSPMEG00000013734	rab9b	72	35.404
ENSPMEG00000013297	rab34b	63	39.375	ENSPMEG00000022988	-	79	39.375
ENSPMEG00000013297	rab34b	63	40.373	ENSPMEG00000021872	rab6bb	76	40.373
ENSPMEG00000013297	rab34b	63	33.125	ENSPMEG00000011336	rab5c	71	33.125
ENSPMEG00000013297	rab34b	81	33.816	ENSPMEG00000002564	-	79	33.816
ENSPMEG00000013297	rab34b	64	38.506	ENSPMEG00000022709	rab33ba	71	38.506
ENSPMEG00000013297	rab34b	63	36.646	ENSPMEG00000003046	rab1ab	78	36.646
ENSPMEG00000013297	rab34b	73	38.172	ENSPMEG00000003369	rab6a	85	38.172
ENSPMEG00000013297	rab34b	100	65.098	ENSPMEG00000002086	rab34a	96	65.098
ENSPMEG00000013297	rab34b	63	39.375	ENSPMEG00000009701	rab30	77	39.375
ENSPMEG00000013297	rab34b	80	31.034	ENSPMEG00000007238	rab5aa	89	31.034
ENSPMEG00000013297	rab34b	72	37.158	ENSPMEG00000004946	RAB39B	82	37.158
ENSPMEG00000013297	rab34b	71	33.880	ENSPMEG00000019159	si:dkey-13a21.4	88	33.880

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000013297	rab34b	85	90.698	ENSAPOG00000019147	rab34b	95	79.899	Acanthochromis_polyacanthus
ENSPMEG00000013297	rab34b	100	75.591	ENSACIG00000004859	rab34b	99	75.591	Amphilophus_citrinellus
ENSPMEG00000013297	rab34b	100	85.938	ENSAOCG00000007106	rab34b	93	85.938	Amphiprion_ocellaris
ENSPMEG00000013297	rab34b	92	87.179	ENSAPEG00000018607	rab34b	86	86.975	Amphiprion_percula
ENSPMEG00000013297	rab34b	94	81.667	ENSATEG00000006851	rab34b	94	81.667	Anabas_testudineus
ENSPMEG00000013297	rab34b	100	87.795	ENSACLG00000005733	rab34b	96	87.795	Astatotilapia_calliptera
ENSPMEG00000013297	rab34b	99	71.937	ENSAMXG00000006018	rab34b	98	71.937	Astyanax_mexicanus
ENSPMEG00000013297	rab34b	93	81.356	ENSCSEG00000018133	rab34b	94	81.356	Cynoglossus_semilaevis
ENSPMEG00000013297	rab34b	99	73.913	ENSDARG00000010977	rab34b	98	73.913	Danio_rerio
ENSPMEG00000013297	rab34b	100	81.176	ENSELUG00000005597	rab34b	99	81.176	Esox_lucius
ENSPMEG00000013297	rab34b	100	92.520	ENSFHEG00000004532	rab34b	100	92.520	Fundulus_heteroclitus
ENSPMEG00000013297	rab34b	81	81.159	ENSGMOG00000007140	rab34b	100	81.159	Gadus_morhua
ENSPMEG00000013297	rab34b	100	84.314	ENSGACG00000020514	rab34b	99	84.314	Gasterosteus_aculeatus
ENSPMEG00000013297	rab34b	99	70.356	ENSIPUG00000024531	rab34	98	70.356	Ictalurus_punctatus
ENSPMEG00000013297	rab34b	100	89.370	ENSKMAG00000019341	rab34b	100	89.370	Kryptolebias_marmoratus
ENSPMEG00000013297	rab34b	100	85.098	ENSLBEG00000027819	rab34b	100	85.098	Labrus_bergylta
ENSPMEG00000013297	rab34b	100	85.882	ENSMAMG00000020214	rab34b	100	85.882	Mastacembelus_armatus
ENSPMEG00000013297	rab34b	100	81.102	ENSMMOG00000010936	rab34b	86	81.102	Mola_mola
ENSPMEG00000013297	rab34b	93	85.593	ENSMALG00000018499	rab34b	88	85.593	Monopterus_albus
ENSPMEG00000013297	rab34b	100	87.795	ENSONIG00000005519	rab34b	100	87.795	Oreochromis_niloticus
ENSPMEG00000013297	rab34b	100	84.646	ENSORLG00000003119	rab34b	92	84.646	Oryzias_latipes
ENSPMEG00000013297	rab34b	100	85.039	ENSORLG00020016139	rab34b	92	85.039	Oryzias_latipes_hni
ENSPMEG00000013297	rab34b	100	85.433	ENSORLG00015000584	rab34b	92	85.433	Oryzias_latipes_hsok
ENSPMEG00000013297	rab34b	100	85.433	ENSOMEG00000010334	rab34b	98	83.951	Oryzias_melastigma
ENSPMEG00000013297	rab34b	99	71.260	ENSPKIG00000013326	rab34b	98	71.260	Paramormyrops_kingsleyae
ENSPMEG00000013297	rab34b	100	82.283	ENSPMGG00000021697	rab34b	99	82.283	Periophthalmus_magnuspinnatus
ENSPMEG00000013297	rab34b	100	100.000	ENSPFOG00000011444	rab34b	99	100.000	Poecilia_formosa
ENSPMEG00000013297	rab34b	100	100.000	ENSPLAG00000005074	rab34b	100	100.000	Poecilia_latipinna
ENSPMEG00000013297	rab34b	100	99.213	ENSPREG00000009813	rab34b	100	99.213	Poecilia_reticulata
ENSPMEG00000013297	rab34b	100	76.772	ENSPNYG00000017153	rab34b	99	89.831	Pundamilia_nyererei
ENSPMEG00000013297	rab34b	93	73.418	ENSPNAG00000015040	rab34b	99	73.418	Pygocentrus_nattereri
ENSPMEG00000013297	rab34b	100	71.094	ENSSFOG00015005188	rab34	99	71.094	Scleropages_formosus
ENSPMEG00000013297	rab34b	93	84.681	ENSSMAG00000019926	rab34b	100	81.013	Scophthalmus_maximus
ENSPMEG00000013297	rab34b	100	89.020	ENSSDUG00000016760	rab34b	80	89.020	Seriola_dumerili
ENSPMEG00000013297	rab34b	72	93.478	ENSSLDG00000014812	rab34b	90	93.478	Seriola_lalandi_dorsalis
ENSPMEG00000013297	rab34b	100	85.039	ENSSPAG00000002801	rab34b	100	85.039	Stegastes_partitus
ENSPMEG00000013297	rab34b	94	83.750	ENSTRUG00000014481	rab34b	97	83.750	Takifugu_rubripes
ENSPMEG00000013297	rab34b	100	80.784	ENSTNIG00000016158	rab34b	99	80.784	Tetraodon_nigroviridis