EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000013624 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA-binding Raly-like protein
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 51089 bases
Position: chrKQ551175.1:368763-419851
Accession: 106916195
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000028478	RRM_1	PF00076.22	4.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000018661	-	1229	XM_014984318	ENSPMEP00000011516	343 (aa)	XP_014839804	-
ENSPMET00000018656	-	1169	-	ENSPMEP00000011507	323 (aa)	-	-
ENSPMET00000018670	-	1017	XM_014984321	ENSPMEP00000028478	338 (aa)	XP_014839807	-

Gene Model

Click here to download ENSPMEG00000013624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000013624's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000013624	-	59	54.018	ENSPMEG00000004802	-	69	51.770
ENSPMEG00000013624	-	61	51.982	ENSPMEG00000016524	-	68	55.411
ENSPMEG00000013624	-	79	65.979	ENSPMEG00000023847	ralyl	100	65.979

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000013624	-	92	77.914	ENSAPOG00000008744	-	97	84.507	Acanthochromis_polyacanthus
ENSPMEG00000013624	-	82	74.751	ENSACIG00000007143	-	98	75.676	Amphilophus_citrinellus
ENSPMEG00000013624	-	80	65.862	ENSAOCG00000001605	-	97	66.319	Amphiprion_ocellaris
ENSPMEG00000013624	-	80	85.315	ENSAOCG00000023599	-	97	85.915	Amphiprion_ocellaris
ENSPMEG00000013624	-	80	80.667	ENSATEG00000022219	-	94	80.667	Anabas_testudineus
ENSPMEG00000013624	-	70	65.873	ENSATEG00000023356	-	92	71.963	Anabas_testudineus
ENSPMEG00000013624	-	80	84.615	ENSACLG00000011720	-	97	84.859	Astatotilapia_calliptera
ENSPMEG00000013624	-	80	65.870	ENSACLG00000006949	-	99	65.870	Astatotilapia_calliptera
ENSPMEG00000013624	-	75	60.949	ENSAMXG00000032617	-	98	57.912	Astyanax_mexicanus
ENSPMEG00000013624	-	80	67.883	ENSAMXG00000019031	-	97	68.382	Astyanax_mexicanus
ENSPMEG00000013624	-	80	78.309	ENSCSEG00000014237	-	98	78.309	Cynoglossus_semilaevis
ENSPMEG00000013624	-	80	85.664	ENSCVAG00000013624	-	97	86.268	Cyprinodon_variegatus
ENSPMEG00000013624	-	80	66.207	ENSCVAG00000018104	-	97	66.899	Cyprinodon_variegatus
ENSPMEG00000013624	-	76	62.455	ENSELUG00000001702	-	96	63.768	Esox_lucius
ENSPMEG00000013624	-	80	64.828	ENSHBUG00000015412	-	97	65.278	Haplochromis_burtoni
ENSPMEG00000013624	-	80	84.615	ENSHBUG00000010040	-	97	85.211	Haplochromis_burtoni
ENSPMEG00000013624	-	80	64.828	ENSIPUG00000000507	ralyl	97	65.972	Ictalurus_punctatus
ENSPMEG00000013624	-	80	65.172	ENSKMAG00000018155	-	97	66.319	Kryptolebias_marmoratus
ENSPMEG00000013624	-	79	82.394	ENSKMAG00000022093	-	97	83.099	Kryptolebias_marmoratus
ENSPMEG00000013624	-	80	81.818	ENSLBEG00000012873	-	97	82.394	Labrus_bergylta
ENSPMEG00000013624	-	80	64.261	ENSLBEG00000011011	-	97	64.706	Labrus_bergylta
ENSPMEG00000013624	-	80	62.759	ENSLOCG00000012787	ralyl	97	61.724	Lepisosteus_oculatus
ENSPMEG00000013624	-	79	81.469	ENSMAMG00000001723	-	95	81.469	Mastacembelus_armatus
ENSPMEG00000013624	-	80	84.615	ENSMZEG00005024447	-	97	84.859	Maylandia_zebra
ENSPMEG00000013624	-	80	65.870	ENSMZEG00005018748	-	99	65.870	Maylandia_zebra
ENSPMEG00000013624	-	80	78.405	ENSMMOG00000020441	-	87	78.405	Mola_mola
ENSPMEG00000013624	-	75	69.922	ENSMALG00000012952	-	97	64.931	Monopterus_albus
ENSPMEG00000013624	-	79	82.746	ENSMALG00000019019	-	76	82.746	Monopterus_albus
ENSPMEG00000013624	-	80	65.870	ENSNBRG00000011376	-	99	65.870	Neolamprologus_brichardi
ENSPMEG00000013624	-	80	75.338	ENSNBRG00000011206	-	98	75.338	Neolamprologus_brichardi
ENSPMEG00000013624	-	79	81.206	ENSORLG00000017934	-	97	81.206	Oryzias_latipes
ENSPMEG00000013624	-	80	65.862	ENSORLG00000012719	-	97	66.319	Oryzias_latipes
ENSPMEG00000013624	-	79	80.142	ENSORLG00020000082	-	97	80.142	Oryzias_latipes_hni
ENSPMEG00000013624	-	80	65.862	ENSORLG00020004438	-	97	66.319	Oryzias_latipes_hni
ENSPMEG00000013624	-	75	80.827	ENSORLG00015004280	-	97	80.496	Oryzias_latipes_hsok
ENSPMEG00000013624	-	80	66.207	ENSORLG00015004727	-	97	66.667	Oryzias_latipes_hsok
ENSPMEG00000013624	-	75	80.970	ENSOMEG00000011821	-	97	80.986	Oryzias_melastigma
ENSPMEG00000013624	-	80	69.343	ENSOMEG00000001170	-	97	69.853	Oryzias_melastigma
ENSPMEG00000013624	-	79	65.614	ENSPKIG00000015926	-	97	65.614	Paramormyrops_kingsleyae
ENSPMEG00000013624	-	63	67.672	ENSPMGG00000014481	-	95	69.828	Periophthalmus_magnuspinnatus
ENSPMEG00000013624	-	80	69.521	ENSPMGG00000009532	-	98	67.808	Periophthalmus_magnuspinnatus
ENSPMEG00000013624	-	80	88.552	ENSPFOG00000006120	-	99	88.552	Poecilia_formosa
ENSPMEG00000013624	-	93	98.101	ENSPLAG00000009877	-	89	98.101	Poecilia_latipinna
ENSPMEG00000013624	-	79	65.979	ENSPLAG00000011323	ralyl	100	65.979	Poecilia_latipinna
ENSPMEG00000013624	-	100	85.028	ENSPREG00000013805	-	100	85.028	Poecilia_reticulata
ENSPMEG00000013624	-	79	64.948	ENSPREG00000001956	ralyl	100	64.948	Poecilia_reticulata
ENSPMEG00000013624	-	80	75.338	ENSPNYG00000008772	-	98	75.338	Pundamilia_nyererei
ENSPMEG00000013624	-	80	65.870	ENSPNYG00000003548	-	99	65.870	Pundamilia_nyererei
ENSPMEG00000013624	-	80	67.883	ENSPNAG00000000498	-	85	68.015	Pygocentrus_nattereri
ENSPMEG00000013624	-	75	61.397	ENSPNAG00000026098	-	97	60.417	Pygocentrus_nattereri
ENSPMEG00000013624	-	80	65.517	ENSSFOG00015009401	-	97	65.972	Scleropages_formosus
ENSPMEG00000013624	-	75	66.929	ENSSFOG00015004575	-	96	67.037	Scleropages_formosus
ENSPMEG00000013624	-	82	77.966	ENSSMAG00000015907	-	94	79.239	Scophthalmus_maximus
ENSPMEG00000013624	-	80	64.483	ENSSMAG00000005608	-	97	66.090	Scophthalmus_maximus
ENSPMEG00000013624	-	80	69.708	ENSSDUG00000007587	-	97	70.221	Seriola_dumerili
ENSPMEG00000013624	-	80	84.965	ENSSDUG00000012473	-	97	85.563	Seriola_dumerili
ENSPMEG00000013624	-	80	65.292	ENSSLDG00000020603	-	97	65.278	Seriola_lalandi_dorsalis
ENSPMEG00000013624	-	80	84.615	ENSSLDG00000011534	-	97	85.211	Seriola_lalandi_dorsalis
ENSPMEG00000013624	-	80	77.778	ENSSPAG00000013858	-	95	77.778	Stegastes_partitus
ENSPMEG00000013624	-	80	79.514	ENSTRUG00000003829	-	97	78.125	Takifugu_rubripes
ENSPMEG00000013624	-	80	76.254	ENSTNIG00000005594	-	100	76.254	Tetraodon_nigroviridis
ENSPMEG00000013624	-	80	58.419	ENSXETG00000017729	ralyl	97	58.076	Xenopus_tropicalis
ENSPMEG00000013624	-	83	62.300	ENSXCOG00000015156	-	93	64.548	Xiphophorus_couchianus
ENSPMEG00000013624	-	79	89.437	ENSXMAG00000007614	-	97	89.437	Xiphophorus_maculatus
ENSPMEG00000013624	-	80	70.073	ENSXMAG00000008396	-	97	70.588	Xiphophorus_maculatus