EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000013656 (Gene tree)
Gene ID: 106931908
Gene Symbol: larp1
Alias: -
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 65077 bases
Position: chrKQ552413.1:214977-280053
Accession: 106931908
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000028511	La	PF05383.17	5.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000018735	-	6677	XM_015010285	ENSPMEP00000028511	1094 (aa)	XP_014865771	UPI00072ECA2C

Gene Model

Click here to download ENSPMEG00000013656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000013656's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000013656	larp1	100	49.246	ENSPMEG00000001224	larp1b	91	53.049

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000013656	larp1	85	68.025	ENSG00000155506	LARP1	90	80.606	Homo_sapiens
ENSPMEG00000013656	larp1	90	94.118	ENSAPOG00000020685	larp1	98	96.226	Acanthochromis_polyacanthus
ENSPMEG00000013656	larp1	85	67.842	ENSAMEG00000016673	LARP1	96	67.883	Ailuropoda_melanoleuca
ENSPMEG00000013656	larp1	100	73.543	ENSACIG00000012994	larp1	100	73.184	Amphilophus_citrinellus
ENSPMEG00000013656	larp1	77	86.316	ENSAOCG00000007792	larp1	100	86.199	Amphiprion_ocellaris
ENSPMEG00000013656	larp1	100	84.755	ENSAPEG00000022246	larp1	100	84.483	Amphiprion_percula
ENSPMEG00000013656	larp1	97	82.852	ENSATEG00000013523	larp1	100	82.722	Anabas_testudineus
ENSPMEG00000013656	larp1	82	70.334	ENSAPLG00000007559	LARP1	99	70.172	Anas_platyrhynchos
ENSPMEG00000013656	larp1	88	67.532	ENSACAG00000004071	LARP1	97	70.111	Anolis_carolinensis
ENSPMEG00000013656	larp1	85	67.987	ENSANAG00000029949	LARP1	96	65.693	Aotus_nancymaae
ENSPMEG00000013656	larp1	100	83.229	ENSACLG00000015256	larp1	99	85.874	Astatotilapia_calliptera
ENSPMEG00000013656	larp1	97	73.303	ENSAMXG00000000859	larp1	98	74.600	Astyanax_mexicanus
ENSPMEG00000013656	larp1	96	63.399	ENSBTAG00000008443	LARP1	97	63.163	Bos_taurus
ENSPMEG00000013656	larp1	96	62.903	ENSCJAG00000004454	LARP1	97	63.702	Callithrix_jacchus
ENSPMEG00000013656	larp1	85	68.224	ENSCAFG00000017639	LARP1	97	68.372	Canis_familiaris
ENSPMEG00000013656	larp1	77	71.167	ENSCAFG00020023860	LARP1	95	71.346	Canis_lupus_dingo
ENSPMEG00000013656	larp1	96	63.653	ENSCHIG00000014414	LARP1	97	62.318	Capra_hircus
ENSPMEG00000013656	larp1	87	67.716	ENSTSYG00000013732	LARP1	96	66.038	Carlito_syrichta
ENSPMEG00000013656	larp1	74	70.553	ENSCAPG00000013865	LARP1	83	68.389	Cavia_aperea
ENSPMEG00000013656	larp1	85	68.926	ENSCPOG00000003377	LARP1	96	68.973	Cavia_porcellus
ENSPMEG00000013656	larp1	96	62.545	ENSCCAG00000025201	LARP1	97	63.793	Cebus_capucinus
ENSPMEG00000013656	larp1	96	60.811	ENSCATG00000030675	LARP1	97	61.545	Cercocebus_atys
ENSPMEG00000013656	larp1	88	67.001	ENSCLAG00000012755	LARP1	95	67.909	Chinchilla_lanigera
ENSPMEG00000013656	larp1	77	68.208	ENSCSAG00000010800	LARP1	95	68.092	Chlorocebus_sabaeus
ENSPMEG00000013656	larp1	83	65.300	ENSCHOG00000012716	LARP1	88	66.018	Choloepus_hoffmanni
ENSPMEG00000013656	larp1	91	69.712	ENSCPBG00000002173	LARP1	90	71.656	Chrysemys_picta_bellii
ENSPMEG00000013656	larp1	84	68.625	ENSCANG00000037418	LARP1	90	68.416	Colobus_angolensis_palliatus
ENSPMEG00000013656	larp1	98	64.050	ENSCGRG00001016913	Larp1	97	64.578	Cricetulus_griseus_chok1gshd
ENSPMEG00000013656	larp1	84	65.433	ENSCGRG00000009916	Larp1	99	65.433	Cricetulus_griseus_crigri
ENSPMEG00000013656	larp1	100	82.294	ENSCSEG00000016431	larp1	100	82.417	Cynoglossus_semilaevis
ENSPMEG00000013656	larp1	99	87.603	ENSCVAG00000022687	larp1	100	88.507	Cyprinodon_variegatus
ENSPMEG00000013656	larp1	92	71.032	ENSDARG00000101722	larp1	93	72.354	Danio_rerio
ENSPMEG00000013656	larp1	99	61.976	ENSDNOG00000012073	LARP1	97	63.406	Dasypus_novemcinctus
ENSPMEG00000013656	larp1	87	63.516	ENSDORG00000002897	Larp1	95	65.759	Dipodomys_ordii
ENSPMEG00000013656	larp1	81	68.777	ENSETEG00000020251	LARP1	100	66.885	Echinops_telfairi
ENSPMEG00000013656	larp1	96	62.940	ENSEASG00005001070	LARP1	97	63.472	Equus_asinus_asinus
ENSPMEG00000013656	larp1	96	62.940	ENSECAG00000017002	LARP1	78	63.933	Equus_caballus
ENSPMEG00000013656	larp1	83	65.665	ENSEEUG00000001065	LARP1	96	65.987	Erinaceus_europaeus
ENSPMEG00000013656	larp1	99	74.865	ENSELUG00000019403	larp1	98	76.357	Esox_lucius
ENSPMEG00000013656	larp1	96	62.656	ENSFCAG00000000592	LARP1	97	63.115	Felis_catus
ENSPMEG00000013656	larp1	76	72.156	ENSFALG00000008335	LARP1	95	72.761	Ficedula_albicollis
ENSPMEG00000013656	larp1	84	69.045	ENSFDAG00000021125	LARP1	96	68.835	Fukomys_damarensis
ENSPMEG00000013656	larp1	64	77.542	ENSFHEG00000020307	larp1	97	78.814	Fundulus_heteroclitus
ENSPMEG00000013656	larp1	99	65.343	ENSGALG00000040109	LARP1	97	66.667	Gallus_gallus
ENSPMEG00000013656	larp1	99	66.190	ENSGAGG00000025113	LARP1	93	74.190	Gopherus_agassizii
ENSPMEG00000013656	larp1	87	67.146	ENSGGOG00000006048	LARP1	91	67.286	Gorilla_gorilla
ENSPMEG00000013656	larp1	100	83.781	ENSHBUG00000020762	larp1	99	86.415	Haplochromis_burtoni
ENSPMEG00000013656	larp1	99	62.710	ENSHGLG00000006267	LARP1	97	63.919	Heterocephalus_glaber_female
ENSPMEG00000013656	larp1	87	67.276	ENSHGLG00100014230	-	96	68.449	Heterocephalus_glaber_male
ENSPMEG00000013656	larp1	88	57.462	ENSHGLG00100003395	-	88	56.327	Heterocephalus_glaber_male
ENSPMEG00000013656	larp1	89	92.732	ENSHCOG00000010786	larp1	97	94.118	Hippocampus_comes
ENSPMEG00000013656	larp1	89	72.774	ENSIPUG00000019105	Larp1	95	73.900	Ictalurus_punctatus
ENSPMEG00000013656	larp1	84	66.422	ENSSTOG00000005678	LARP1	95	66.422	Ictidomys_tridecemlineatus
ENSPMEG00000013656	larp1	96	60.609	ENSJJAG00000016950	Larp1	97	60.741	Jaculus_jaculus
ENSPMEG00000013656	larp1	100	84.991	ENSKMAG00000018468	larp1	99	87.705	Kryptolebias_marmoratus
ENSPMEG00000013656	larp1	99	80.836	ENSLBEG00000027172	larp1	100	80.322	Labrus_bergylta
ENSPMEG00000013656	larp1	93	74.636	ENSLOCG00000012457	larp1	99	74.636	Lepisosteus_oculatus
ENSPMEG00000013656	larp1	98	61.849	ENSLAFG00000008991	LARP1	97	62.980	Loxodonta_africana
ENSPMEG00000013656	larp1	84	67.996	ENSMFAG00000031651	LARP1	90	67.891	Macaca_fascicularis
ENSPMEG00000013656	larp1	84	65.368	ENSMMUG00000009411	LARP1	96	65.474	Macaca_mulatta
ENSPMEG00000013656	larp1	77	70.901	ENSMNEG00000039294	LARP1	95	70.785	Macaca_nemestrina
ENSPMEG00000013656	larp1	84	68.101	ENSMLEG00000035142	LARP1	90	67.996	Mandrillus_leucophaeus
ENSPMEG00000013656	larp1	100	82.130	ENSMAMG00000021788	larp1	100	82.310	Mastacembelus_armatus
ENSPMEG00000013656	larp1	100	83.229	ENSMZEG00005009345	larp1	99	85.874	Maylandia_zebra
ENSPMEG00000013656	larp1	88	69.089	ENSMGAG00000005696	LARP1	96	68.526	Meleagris_gallopavo
ENSPMEG00000013656	larp1	99	63.363	ENSMAUG00000001385	Larp1	97	64.422	Mesocricetus_auratus
ENSPMEG00000013656	larp1	85	67.638	ENSMICG00000000837	LARP1	95	71.313	Microcebus_murinus
ENSPMEG00000013656	larp1	98	64.228	ENSMOCG00000008920	Larp1	97	64.695	Microtus_ochrogaster
ENSPMEG00000013656	larp1	94	60.914	ENSMMOG00000013364	larp1	99	62.780	Mola_mola
ENSPMEG00000013656	larp1	88	67.275	ENSMODG00000008663	LARP1	96	68.476	Monodelphis_domestica
ENSPMEG00000013656	larp1	100	84.182	ENSMALG00000017180	larp1	100	83.727	Monopterus_albus
ENSPMEG00000013656	larp1	98	64.557	MGP_CAROLIEiJ_G0016383	Larp1	97	64.695	Mus_caroli
ENSPMEG00000013656	larp1	98	64.647	ENSMUSG00000037331	Larp1	97	64.786	Mus_musculus
ENSPMEG00000013656	larp1	98	64.324	MGP_PahariEiJ_G0017518	Larp1	97	64.455	Mus_pahari
ENSPMEG00000013656	larp1	98	64.647	MGP_SPRETEiJ_G0017225	Larp1	97	64.786	Mus_spretus
ENSPMEG00000013656	larp1	82	60.358	ENSMPUG00000013564	LARP1	99	60.147	Mustela_putorius_furo
ENSPMEG00000013656	larp1	87	64.024	ENSMLUG00000002608	LARP1	97	64.969	Myotis_lucifugus
ENSPMEG00000013656	larp1	87	65.460	ENSNGAG00000001098	Larp1	95	65.933	Nannospalax_galili
ENSPMEG00000013656	larp1	90	83.283	ENSNBRG00000008963	larp1	98	83.483	Neolamprologus_brichardi
ENSPMEG00000013656	larp1	85	66.842	ENSNLEG00000016588	LARP1	96	65.919	Nomascus_leucogenys
ENSPMEG00000013656	larp1	87	63.354	ENSMEUG00000002957	LARP1	96	64.461	Notamacropus_eugenii
ENSPMEG00000013656	larp1	85	68.509	ENSOPRG00000013014	LARP1	96	68.553	Ochotona_princeps
ENSPMEG00000013656	larp1	85	68.092	ENSODEG00000010824	LARP1	96	68.134	Octodon_degus
ENSPMEG00000013656	larp1	99	80.323	ENSONIG00000017308	larp1	97	82.136	Oreochromis_niloticus
ENSPMEG00000013656	larp1	89	68.337	ENSOANG00000005096	LARP1	95	70.594	Ornithorhynchus_anatinus
ENSPMEG00000013656	larp1	99	63.167	ENSOCUG00000013066	LARP1	97	64.384	Oryctolagus_cuniculus
ENSPMEG00000013656	larp1	100	81.176	ENSORLG00000000824	larp1	100	81.267	Oryzias_latipes
ENSPMEG00000013656	larp1	100	81.414	ENSORLG00020022241	larp1	100	81.414	Oryzias_latipes_hni
ENSPMEG00000013656	larp1	100	80.200	ENSORLG00015007538	larp1	100	81.471	Oryzias_latipes_hsok
ENSPMEG00000013656	larp1	100	80.581	ENSOMEG00000003134	larp1	100	81.596	Oryzias_melastigma
ENSPMEG00000013656	larp1	87	67.107	ENSOGAG00000016750	LARP1	96	68.344	Otolemur_garnettii
ENSPMEG00000013656	larp1	85	67.016	ENSOARG00000009893	LARP1	97	66.632	Ovis_aries
ENSPMEG00000013656	larp1	85	67.921	ENSPPAG00000042993	LARP1	90	68.067	Pan_paniscus
ENSPMEG00000013656	larp1	85	66.943	ENSPPRG00000009780	LARP1	91	66.423	Panthera_pardus
ENSPMEG00000013656	larp1	85	67.152	ENSPTIG00000007013	LARP1	91	66.945	Panthera_tigris_altaica
ENSPMEG00000013656	larp1	96	60.592	ENSPTRG00000017447	LARP1	97	61.419	Pan_troglodytes
ENSPMEG00000013656	larp1	96	60.721	ENSPANG00000008080	LARP1	97	61.545	Papio_anubis
ENSPMEG00000013656	larp1	100	72.883	ENSPKIG00000010096	larp1	96	75.118	Paramormyrops_kingsleyae
ENSPMEG00000013656	larp1	97	65.743	ENSPKIG00000017153	-	99	65.994	Paramormyrops_kingsleyae
ENSPMEG00000013656	larp1	94	75.895	ENSPMGG00000011599	larp1	97	76.573	Periophthalmus_magnuspinnatus
ENSPMEG00000013656	larp1	87	66.111	ENSPEMG00000022523	Larp1	96	66.283	Peromyscus_maniculatus_bairdii
ENSPMEG00000013656	larp1	97	64.072	ENSPCIG00000019242	LARP1	89	64.587	Phascolarctos_cinereus
ENSPMEG00000013656	larp1	100	99.269	ENSPFOG00000005836	larp1	100	99.269	Poecilia_formosa
ENSPMEG00000013656	larp1	100	99.177	ENSPLAG00000008936	larp1	100	99.177	Poecilia_latipinna
ENSPMEG00000013656	larp1	89	97.732	ENSPREG00000005726	larp1	99	97.732	Poecilia_reticulata
ENSPMEG00000013656	larp1	85	65.938	ENSPCAG00000006407	LARP1	97	65.969	Procavia_capensis
ENSPMEG00000013656	larp1	85	61.314	ENSPCOG00000016949	LARP1	96	64.046	Propithecus_coquereli
ENSPMEG00000013656	larp1	96	63.012	ENSPVAG00000002262	LARP1	97	63.571	Pteropus_vampyrus
ENSPMEG00000013656	larp1	100	83.140	ENSPNYG00000007938	larp1	99	85.976	Pundamilia_nyererei
ENSPMEG00000013656	larp1	98	72.181	ENSPNAG00000021427	larp1	97	74.621	Pygocentrus_nattereri
ENSPMEG00000013656	larp1	87	65.369	ENSRNOG00000031544	Larp1	95	66.143	Rattus_norvegicus
ENSPMEG00000013656	larp1	84	68.101	ENSRBIG00000038005	LARP1	90	67.996	Rhinopithecus_bieti
ENSPMEG00000013656	larp1	85	67.779	ENSRROG00000034073	LARP1	95	70.901	Rhinopithecus_roxellana
ENSPMEG00000013656	larp1	88	66.165	ENSSBOG00000019816	LARP1	96	65.409	Saimiri_boliviensis_boliviensis
ENSPMEG00000013656	larp1	87	68.410	ENSSHAG00000011115	LARP1	96	69.767	Sarcophilus_harrisii
ENSPMEG00000013656	larp1	97	71.177	ENSSFOG00015018058	-	96	72.049	Scleropages_formosus
ENSPMEG00000013656	larp1	88	74.675	ENSSFOG00015020304	larp1	95	76.045	Scleropages_formosus
ENSPMEG00000013656	larp1	93	79.364	ENSSMAG00000007468	larp1	98	80.929	Scophthalmus_maximus
ENSPMEG00000013656	larp1	100	84.154	ENSSDUG00000000268	larp1	100	84.244	Seriola_dumerili
ENSPMEG00000013656	larp1	81	81.502	ENSSLDG00000016505	larp1	99	80.942	Seriola_lalandi_dorsalis
ENSPMEG00000013656	larp1	53	83.534	ENSSARG00000013907	-	83	83.600	Sorex_araneus
ENSPMEG00000013656	larp1	99	64.111	ENSSPUG00000012179	-	99	64.505	Sphenodon_punctatus
ENSPMEG00000013656	larp1	100	83.512	ENSSPAG00000003910	larp1	100	84.032	Stegastes_partitus
ENSPMEG00000013656	larp1	96	62.533	ENSSSCG00000017069	LARP1	96	70.193	Sus_scrofa
ENSPMEG00000013656	larp1	84	69.937	ENSTGUG00000000704	LARP1	100	70.253	Taeniopygia_guttata
ENSPMEG00000013656	larp1	99	79.964	ENSTRUG00000009470	larp1	99	80.054	Takifugu_rubripes
ENSPMEG00000013656	larp1	82	67.538	ENSTBEG00000003381	LARP1	99	67.320	Tupaia_belangeri
ENSPMEG00000013656	larp1	87	66.497	ENSTTRG00000015934	LARP1	97	67.983	Tursiops_truncatus
ENSPMEG00000013656	larp1	96	62.389	ENSUAMG00000019334	LARP1	97	62.780	Ursus_americanus
ENSPMEG00000013656	larp1	85	66.144	ENSUMAG00000002934	LARP1	96	67.885	Ursus_maritimus
ENSPMEG00000013656	larp1	77	71.167	ENSVVUG00000004644	LARP1	95	71.346	Vulpes_vulpes
ENSPMEG00000013656	larp1	92	69.223	ENSXETG00000008413	larp1	99	65.789	Xenopus_tropicalis
ENSPMEG00000013656	larp1	86	93.245	ENSXCOG00000004022	larp1	99	93.245	Xiphophorus_couchianus
ENSPMEG00000013656	larp1	100	97.715	ENSXMAG00000018780	larp1	100	97.715	Xiphophorus_maculatus