EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000013694 (Gene tree)
Gene ID: 106920138
Gene Symbol: gfi1ab
Alias: -
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 4414 bases
Position: chrKQ551386.1:300926-305339
Accession: 106920138
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000028534	zf-C2H2	PF00096.26	5.5e-31	1	6
ENSPMEP00000028534	zf-C2H2	PF00096.26	5.5e-31	2	6
ENSPMEP00000028534	zf-C2H2	PF00096.26	5.5e-31	3	6
ENSPMEP00000028534	zf-C2H2	PF00096.26	5.5e-31	4	6
ENSPMEP00000028534	zf-C2H2	PF00096.26	5.5e-31	5	6
ENSPMEP00000028534	zf-C2H2	PF00096.26	5.5e-31	6	6
ENSPMEP00000028534	zf-met	PF12874.7	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000018789	-	2811	XM_014990985	ENSPMEP00000028534	391 (aa)	XP_014846471	UPI00072DEDC4

Gene Model

Click here to download ENSPMEG00000013694's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000013694's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000013694	gfi1ab	58	43.275	ENSPMEG00000014991	-	76	43.284
ENSPMEG00000013694	gfi1ab	50	38.971	ENSPMEG00000007589	-	66	40.741
ENSPMEG00000013694	gfi1ab	67	48.214	ENSPMEG00000022727	-	93	48.750
ENSPMEG00000013694	gfi1ab	58	35.165	ENSPMEG00000017809	-	60	35.165
ENSPMEG00000013694	gfi1ab	50	43.624	ENSPMEG00000020615	-	85	43.624
ENSPMEG00000013694	gfi1ab	52	42.771	ENSPMEG00000018673	-	96	42.771
ENSPMEG00000013694	gfi1ab	86	42.647	ENSPMEG00000020833	-	96	42.647
ENSPMEG00000013694	gfi1ab	66	41.237	ENSPMEG00000012198	znf236	67	41.935
ENSPMEG00000013694	gfi1ab	72	52.381	ENSPMEG00000004595	-	95	52.381
ENSPMEG00000013694	gfi1ab	66	32.258	ENSPMEG00000018283	znf646	71	32.258
ENSPMEG00000013694	gfi1ab	100	61.463	ENSPMEG00000019299	GFI1	100	62.195
ENSPMEG00000013694	gfi1ab	54	43.609	ENSPMEG00000014146	-	73	43.609
ENSPMEG00000013694	gfi1ab	68	40.107	ENSPMEG00000011517	-	93	44.048
ENSPMEG00000013694	gfi1ab	53	39.634	ENSPMEG00000019229	-	61	39.634
ENSPMEG00000013694	gfi1ab	100	50.636	ENSPMEG00000019220	gfi1b	100	50.636
ENSPMEG00000013694	gfi1ab	53	46.429	ENSPMEG00000021130	-	94	43.750
ENSPMEG00000013694	gfi1ab	50	43.750	ENSPMEG00000009213	-	66	43.750
ENSPMEG00000013694	gfi1ab	51	45.045	ENSPMEG00000016478	-	74	45.045
ENSPMEG00000013694	gfi1ab	56	45.783	ENSPMEG00000017910	-	89	44.118
ENSPMEG00000013694	gfi1ab	57	42.236	ENSPMEG00000016966	-	96	43.103
ENSPMEG00000013694	gfi1ab	52	45.833	ENSPMEG00000024091	-	84	46.951
ENSPMEG00000013694	gfi1ab	65	45.652	ENSPMEG00000016141	-	92	45.652
ENSPMEG00000013694	gfi1ab	61	45.000	ENSPMEG00000022985	-	80	45.000
ENSPMEG00000013694	gfi1ab	60	44.375	ENSPMEG00000022981	-	66	44.375
ENSPMEG00000013694	gfi1ab	100	50.636	ENSPMEG00000001556	GFI1B	100	50.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000013694	gfi1ab	100	63.059	ENSG00000162676	GFI1	100	63.294	Homo_sapiens
ENSPMEG00000013694	gfi1ab	100	84.383	ENSAPOG00000015189	gfi1ab	100	84.383	Acanthochromis_polyacanthus
ENSPMEG00000013694	gfi1ab	100	82.143	ENSACIG00000016354	gfi1ab	100	82.143	Amphilophus_citrinellus
ENSPMEG00000013694	gfi1ab	100	74.430	ENSAOCG00000008339	gfi1ab	100	74.430	Amphiprion_ocellaris
ENSPMEG00000013694	gfi1ab	100	84.887	ENSAPEG00000023870	gfi1ab	100	84.887	Amphiprion_percula
ENSPMEG00000013694	gfi1ab	100	77.494	ENSATEG00000009167	gfi1ab	89	77.494	Anabas_testudineus
ENSPMEG00000013694	gfi1ab	86	64.306	ENSAPLG00000015700	GFI1	99	64.306	Anas_platyrhynchos
ENSPMEG00000013694	gfi1ab	100	63.835	ENSACAG00000004498	GFI1	100	64.320	Anolis_carolinensis
ENSPMEG00000013694	gfi1ab	100	62.676	ENSANAG00000019656	GFI1	100	63.380	Aotus_nancymaae
ENSPMEG00000013694	gfi1ab	100	85.678	ENSACLG00000026458	gfi1ab	93	85.678	Astatotilapia_calliptera
ENSPMEG00000013694	gfi1ab	100	64.589	ENSAMXG00000039600	gfi1ab	100	64.589	Astyanax_mexicanus
ENSPMEG00000013694	gfi1ab	100	53.964	ENSAMXG00000006669	GFI1	100	53.964	Astyanax_mexicanus
ENSPMEG00000013694	gfi1ab	100	60.993	ENSBTAG00000016723	GFI1	100	62.972	Bos_taurus
ENSPMEG00000013694	gfi1ab	100	62.353	ENSCJAG00000017609	GFI1	100	62.588	Callithrix_jacchus
ENSPMEG00000013694	gfi1ab	100	61.882	ENSCAFG00000020155	GFI1	100	62.118	Canis_familiaris
ENSPMEG00000013694	gfi1ab	100	61.882	ENSCAFG00020013371	GFI1	88	62.118	Canis_lupus_dingo
ENSPMEG00000013694	gfi1ab	100	60.849	ENSCHIG00000016135	GFI1	100	62.676	Capra_hircus
ENSPMEG00000013694	gfi1ab	100	62.411	ENSCPOG00000011727	GFI1	100	62.884	Cavia_porcellus
ENSPMEG00000013694	gfi1ab	100	62.118	ENSCCAG00000036072	GFI1	100	62.353	Cebus_capucinus
ENSPMEG00000013694	gfi1ab	100	63.294	ENSCATG00000037873	GFI1	100	63.529	Cercocebus_atys
ENSPMEG00000013694	gfi1ab	92	87.379	ENSCLAG00000005915	GFI1	100	61.098	Chinchilla_lanigera
ENSPMEG00000013694	gfi1ab	98	58.038	ENSCSAG00000001469	GFI1	100	58.311	Chlorocebus_sabaeus
ENSPMEG00000013694	gfi1ab	100	63.529	ENSCANG00000034077	GFI1	100	63.765	Colobus_angolensis_palliatus
ENSPMEG00000013694	gfi1ab	100	60.941	ENSCGRG00001015432	Gfi1	100	61.176	Cricetulus_griseus_chok1gshd
ENSPMEG00000013694	gfi1ab	100	61.596	ENSCSEG00000017729	GFI1	100	61.845	Cynoglossus_semilaevis
ENSPMEG00000013694	gfi1ab	100	57.831	ENSCVAG00000004930	GFI1	100	60.145	Cyprinodon_variegatus
ENSPMEG00000013694	gfi1ab	100	89.514	ENSCVAG00000011828	gfi1ab	100	89.514	Cyprinodon_variegatus
ENSPMEG00000013694	gfi1ab	100	70.398	ENSDARG00000044457	gfi1ab	100	70.398	Danio_rerio
ENSPMEG00000013694	gfi1ab	100	62.061	ENSDNOG00000000782	GFI1	97	62.529	Dasypus_novemcinctus
ENSPMEG00000013694	gfi1ab	100	63.033	ENSEASG00005015509	GFI1	86	63.507	Equus_asinus_asinus
ENSPMEG00000013694	gfi1ab	98	54.408	ENSECAG00000006647	GFI1	94	54.912	Equus_caballus
ENSPMEG00000013694	gfi1ab	100	60.613	ENSEEUG00000000198	GFI1	100	60.849	Erinaceus_europaeus
ENSPMEG00000013694	gfi1ab	100	73.020	ENSELUG00000003015	gfi1ab	99	73.020	Esox_lucius
ENSPMEG00000013694	gfi1ab	100	62.687	ENSELUG00000019033	GFI1	100	62.935	Esox_lucius
ENSPMEG00000013694	gfi1ab	100	61.972	ENSFCAG00000005914	GFI1	100	62.207	Felis_catus
ENSPMEG00000013694	gfi1ab	100	62.376	ENSFHEG00000000341	GFI1	100	62.624	Fundulus_heteroclitus
ENSPMEG00000013694	gfi1ab	100	92.327	ENSFHEG00000010997	gfi1ab	100	92.327	Fundulus_heteroclitus
ENSPMEG00000013694	gfi1ab	100	79.817	ENSFHEG00000002747	-	99	61.585	Fundulus_heteroclitus
ENSPMEG00000013694	gfi1ab	100	73.116	ENSGMOG00000007737	gfi1ab	100	73.116	Gadus_morhua
ENSPMEG00000013694	gfi1ab	100	64.010	ENSGALG00000043650	GFI1	100	64.251	Gallus_gallus
ENSPMEG00000013694	gfi1ab	100	97.187	ENSGAFG00000016637	gfi1ab	100	97.187	Gambusia_affinis
ENSPMEG00000013694	gfi1ab	100	59.559	ENSGAFG00000018063	GFI1	100	61.743	Gambusia_affinis
ENSPMEG00000013694	gfi1ab	100	81.330	ENSGACG00000004257	gfi1ab	97	81.586	Gasterosteus_aculeatus
ENSPMEG00000013694	gfi1ab	100	63.059	ENSGGOG00000005320	GFI1	100	63.294	Gorilla_gorilla
ENSPMEG00000013694	gfi1ab	100	83.632	ENSHBUG00000011969	gfi1ab	100	83.632	Haplochromis_burtoni
ENSPMEG00000013694	gfi1ab	100	63.121	ENSHGLG00000008020	GFI1	100	63.830	Heterocephalus_glaber_female
ENSPMEG00000013694	gfi1ab	100	63.121	ENSHGLG00100000610	GFI1	100	63.830	Heterocephalus_glaber_male
ENSPMEG00000013694	gfi1ab	100	58.663	ENSHCOG00000019555	GFI1	100	74.286	Hippocampus_comes
ENSPMEG00000013694	gfi1ab	100	62.857	ENSHCOG00000008590	gfi1ab	100	62.857	Hippocampus_comes
ENSPMEG00000013694	gfi1ab	99	64.706	ENSIPUG00000021407	-	96	64.706	Ictalurus_punctatus
ENSPMEG00000013694	gfi1ab	100	59.951	ENSIPUG00000013414	GFI1	100	59.951	Ictalurus_punctatus
ENSPMEG00000013694	gfi1ab	100	65.163	ENSIPUG00000010071	gfi1ab	87	65.414	Ictalurus_punctatus
ENSPMEG00000013694	gfi1ab	100	61.882	ENSSTOG00000014583	GFI1	100	62.353	Ictidomys_tridecemlineatus
ENSPMEG00000013694	gfi1ab	100	83.120	ENSKMAG00000003810	gfi1ab	100	83.120	Kryptolebias_marmoratus
ENSPMEG00000013694	gfi1ab	100	83.586	ENSLBEG00000027776	gfi1ab	100	83.586	Labrus_bergylta
ENSPMEG00000013694	gfi1ab	100	66.914	ENSLACG00000013362	GFI1	98	66.914	Latimeria_chalumnae
ENSPMEG00000013694	gfi1ab	100	69.059	ENSLOCG00000004711	gfi1ab	100	69.307	Lepisosteus_oculatus
ENSPMEG00000013694	gfi1ab	100	60.427	ENSLAFG00000018346	GFI1	100	61.085	Loxodonta_africana
ENSPMEG00000013694	gfi1ab	100	63.294	ENSMFAG00000045801	GFI1	100	63.529	Macaca_fascicularis
ENSPMEG00000013694	gfi1ab	100	63.294	ENSMNEG00000036338	GFI1	100	63.529	Macaca_nemestrina
ENSPMEG00000013694	gfi1ab	100	63.294	ENSMLEG00000036181	GFI1	100	63.529	Mandrillus_leucophaeus
ENSPMEG00000013694	gfi1ab	100	83.887	ENSMAMG00000008125	gfi1ab	100	83.887	Mastacembelus_armatus
ENSPMEG00000013694	gfi1ab	100	85.934	ENSMZEG00005009895	gfi1ab	100	85.934	Maylandia_zebra
ENSPMEG00000013694	gfi1ab	86	65.341	ENSMGAG00000008187	GFI1	99	65.625	Meleagris_gallopavo
ENSPMEG00000013694	gfi1ab	100	61.033	ENSMICG00000047208	GFI1	100	61.268	Microcebus_murinus
ENSPMEG00000013694	gfi1ab	100	73.485	ENSMMOG00000005556	gfi1ab	100	73.485	Mola_mola
ENSPMEG00000013694	gfi1ab	100	60.093	ENSMODG00000011802	GFI1	100	62.207	Monodelphis_domestica
ENSPMEG00000013694	gfi1ab	100	80.563	ENSMALG00000014672	gfi1ab	100	80.563	Monopterus_albus
ENSPMEG00000013694	gfi1ab	100	59.491	MGP_CAROLIEiJ_G0027508	Gfi1	100	97.778	Mus_caroli
ENSPMEG00000013694	gfi1ab	100	60.941	ENSMUSG00000029275	Gfi1	100	59.954	Mus_musculus
ENSPMEG00000013694	gfi1ab	100	59.491	MGP_PahariEiJ_G0017280	Gfi1	100	97.778	Mus_pahari
ENSPMEG00000013694	gfi1ab	100	59.491	MGP_SPRETEiJ_G0028507	Gfi1	100	60.941	Mus_spretus
ENSPMEG00000013694	gfi1ab	100	65.163	ENSMPUG00000004178	GFI1	97	65.327	Mustela_putorius_furo
ENSPMEG00000013694	gfi1ab	100	61.702	ENSMLUG00000015191	GFI1	97	61.702	Myotis_lucifugus
ENSPMEG00000013694	gfi1ab	100	82.828	ENSNBRG00000015774	gfi1ab	100	82.828	Neolamprologus_brichardi
ENSPMEG00000013694	gfi1ab	86	65.041	ENSNLEG00000010470	GFI1	91	65.312	Nomascus_leucogenys
ENSPMEG00000013694	gfi1ab	100	62.588	ENSOPRG00000001473	GFI1	100	63.059	Ochotona_princeps
ENSPMEG00000013694	gfi1ab	100	85.422	ENSONIG00000019246	gfi1ab	100	85.422	Oreochromis_niloticus
ENSPMEG00000013694	gfi1ab	98	55.733	ENSOCUG00000023553	GFI1	93	56.000	Oryctolagus_cuniculus
ENSPMEG00000013694	gfi1ab	100	61.500	ENSORLG00000005060	GFI1	100	62.000	Oryzias_latipes
ENSPMEG00000013694	gfi1ab	100	78.005	ENSORLG00000013806	gfi1ab	100	78.005	Oryzias_latipes
ENSPMEG00000013694	gfi1ab	100	54.408	ENSORLG00020002817	GFI1	100	54.408	Oryzias_latipes_hni
ENSPMEG00000013694	gfi1ab	100	78.517	ENSORLG00020001602	gfi1ab	100	78.517	Oryzias_latipes_hni
ENSPMEG00000013694	gfi1ab	100	58.250	ENSORLG00015006070	GFI1	100	60.750	Oryzias_latipes_hsok
ENSPMEG00000013694	gfi1ab	100	61.042	ENSOMEG00000016722	GFI1	100	62.035	Oryzias_melastigma
ENSPMEG00000013694	gfi1ab	100	64.304	ENSOGAG00000027913	GFI1	100	64.304	Otolemur_garnettii
ENSPMEG00000013694	gfi1ab	100	63.797	ENSPPAG00000042186	GFI1	100	64.051	Pan_paniscus
ENSPMEG00000013694	gfi1ab	100	61.972	ENSPPRG00000007521	GFI1	100	62.207	Panthera_pardus
ENSPMEG00000013694	gfi1ab	100	62.588	ENSPTRG00000043053	GFI1	100	62.824	Pan_troglodytes
ENSPMEG00000013694	gfi1ab	100	63.294	ENSPANG00000016433	GFI1	100	63.529	Papio_anubis
ENSPMEG00000013694	gfi1ab	100	70.370	ENSPKIG00000004263	GFI1	100	70.370	Paramormyrops_kingsleyae
ENSPMEG00000013694	gfi1ab	86	65.242	ENSPSIG00000008734	GFI1	96	65.527	Pelodiscus_sinensis
ENSPMEG00000013694	gfi1ab	100	75.064	ENSPMGG00000012546	gfi1ab	100	75.318	Periophthalmus_magnuspinnatus
ENSPMEG00000013694	gfi1ab	99	92.262	ENSPMGG00000011041	GFI1	53	92.262	Periophthalmus_magnuspinnatus
ENSPMEG00000013694	gfi1ab	100	62.411	ENSPCIG00000013728	GFI1	100	62.884	Phascolarctos_cinereus
ENSPMEG00000013694	gfi1ab	100	99.233	ENSPFOG00000023214	gfi1ab	100	99.233	Poecilia_formosa
ENSPMEG00000013694	gfi1ab	100	99.233	ENSPLAG00000010879	gfi1ab	100	99.233	Poecilia_latipinna
ENSPMEG00000013694	gfi1ab	100	61.594	ENSPLAG00000005376	GFI1	91	61.836	Poecilia_latipinna
ENSPMEG00000013694	gfi1ab	100	98.210	ENSPREG00000014097	gfi1ab	100	98.210	Poecilia_reticulata
ENSPMEG00000013694	gfi1ab	100	56.010	ENSPREG00000007997	GFI1	100	56.266	Poecilia_reticulata
ENSPMEG00000013694	gfi1ab	100	51.515	ENSPCAG00000011020	GFI1	100	51.515	Procavia_capensis
ENSPMEG00000013694	gfi1ab	100	61.502	ENSPCOG00000020540	GFI1	100	61.737	Propithecus_coquereli
ENSPMEG00000013694	gfi1ab	100	61.682	ENSPVAG00000006928	GFI1	100	62.295	Pteropus_vampyrus
ENSPMEG00000013694	gfi1ab	100	85.678	ENSPNYG00000021183	gfi1ab	100	85.678	Pundamilia_nyererei
ENSPMEG00000013694	gfi1ab	100	62.712	ENSPNAG00000014299	-	97	62.712	Pygocentrus_nattereri
ENSPMEG00000013694	gfi1ab	100	57.463	ENSPNAG00000028014	GFI1	100	57.463	Pygocentrus_nattereri
ENSPMEG00000013694	gfi1ab	100	65.835	ENSPNAG00000027258	gfi1ab	100	65.835	Pygocentrus_nattereri
ENSPMEG00000013694	gfi1ab	100	60.706	ENSRNOG00000002042	Gfi1	100	60.422	Rattus_norvegicus
ENSPMEG00000013694	gfi1ab	100	63.294	ENSRBIG00000036467	GFI1	100	63.765	Rhinopithecus_bieti
ENSPMEG00000013694	gfi1ab	100	63.294	ENSRROG00000031687	GFI1	100	63.765	Rhinopithecus_roxellana
ENSPMEG00000013694	gfi1ab	100	62.588	ENSSBOG00000031300	GFI1	100	62.353	Saimiri_boliviensis_boliviensis
ENSPMEG00000013694	gfi1ab	56	52.679	ENSSFOG00015008114	-	69	52.679	Scleropages_formosus
ENSPMEG00000013694	gfi1ab	100	70.762	ENSSFOG00015020295	gfi1	100	70.762	Scleropages_formosus
ENSPMEG00000013694	gfi1ab	100	79.241	ENSSMAG00000002782	gfi1ab	100	79.241	Scophthalmus_maximus
ENSPMEG00000013694	gfi1ab	100	80.818	ENSSDUG00000022410	gfi1ab	100	81.074	Seriola_dumerili
ENSPMEG00000013694	gfi1ab	100	81.074	ENSSLDG00000020163	gfi1ab	100	81.330	Seriola_lalandi_dorsalis
ENSPMEG00000013694	gfi1ab	100	84.211	ENSSPAG00000009140	gfi1ab	100	84.211	Stegastes_partitus
ENSPMEG00000013694	gfi1ab	100	63.333	ENSSSCG00000006902	GFI1	100	64.286	Sus_scrofa
ENSPMEG00000013694	gfi1ab	86	65.714	ENSTGUG00000006060	GFI1	99	66.000	Taeniopygia_guttata
ENSPMEG00000013694	gfi1ab	100	76.020	ENSTRUG00000000415	gfi1ab	100	76.020	Takifugu_rubripes
ENSPMEG00000013694	gfi1ab	100	73.367	ENSTNIG00000000651	gfi1ab	97	73.300	Tetraodon_nigroviridis
ENSPMEG00000013694	gfi1ab	100	61.611	ENSTTRG00000000082	GFI1	100	63.033	Tursiops_truncatus
ENSPMEG00000013694	gfi1ab	100	63.814	ENSUAMG00000021124	GFI1	91	63.373	Ursus_americanus
ENSPMEG00000013694	gfi1ab	100	63.524	ENSXETG00000023006	gfi1	98	63.772	Xenopus_tropicalis
ENSPMEG00000013694	gfi1ab	100	97.187	ENSXMAG00000010523	gfi1ab	100	97.187	Xiphophorus_maculatus
ENSPMEG00000013694	gfi1ab	86	55.524	ENSXMAG00000009274	GFI1	70	56.303	Xiphophorus_maculatus