EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000013816 (Gene tree)
Gene ID: 106933340
Gene Symbol: frg1
Alias: -
Full Name: FSHD region gene 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 13544 bases
Position: chrKQ552591.1:86966-100509
Accession: 106933340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000011707	FRG1	PF06229.12	5.8e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000018920	-	1570	XM_015012524	ENSPMEP00000011707	255 (aa)	XP_014868010	UPI00072ED14A

Gene Model

Click here to download ENSPMEG00000013816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000013816's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000013816	frg1	100	67.442	ENSG00000109536	FRG1	100	76.724	Homo_sapiens
ENSPMEG00000013816	frg1	100	82.353	ENSAPOG00000001060	frg1	100	85.490	Acanthochromis_polyacanthus
ENSPMEG00000013816	frg1	100	67.829	ENSAMEG00000013503	FRG1	100	70.543	Ailuropoda_melanoleuca
ENSPMEG00000013816	frg1	87	86.937	ENSACIG00000022283	frg1	100	86.937	Amphilophus_citrinellus
ENSPMEG00000013816	frg1	87	85.202	ENSAOCG00000024240	frg1	87	85.202	Amphiprion_ocellaris
ENSPMEG00000013816	frg1	100	83.137	ENSAPEG00000002486	frg1	100	86.275	Amphiprion_percula
ENSPMEG00000013816	frg1	100	83.529	ENSATEG00000010414	frg1	100	86.667	Anabas_testudineus
ENSPMEG00000013816	frg1	100	71.094	ENSAPLG00000007785	-	100	71.094	Anas_platyrhynchos
ENSPMEG00000013816	frg1	100	71.094	ENSACAG00000006877	-	100	71.094	Anolis_carolinensis
ENSPMEG00000013816	frg1	100	69.261	ENSANAG00000020876	FRG1	100	69.261	Aotus_nancymaae
ENSPMEG00000013816	frg1	100	80.000	ENSACLG00000027065	frg1	100	79.608	Astatotilapia_calliptera
ENSPMEG00000013816	frg1	100	82.031	ENSAMXG00000032700	frg1	100	82.031	Astyanax_mexicanus
ENSPMEG00000013816	frg1	100	67.829	ENSBTAG00000007089	FRG1	100	70.543	Bos_taurus
ENSPMEG00000013816	frg1	83	40.969	WBGene00014177	frg-1	88	40.083	Caenorhabditis_elegans
ENSPMEG00000013816	frg1	100	69.261	ENSCJAG00000011272	FRG1	100	69.261	Callithrix_jacchus
ENSPMEG00000013816	frg1	100	67.829	ENSCAFG00000007135	FRG1	100	70.543	Canis_familiaris
ENSPMEG00000013816	frg1	83	71.698	ENSCAFG00020000082	-	85	71.698	Canis_lupus_dingo
ENSPMEG00000013816	frg1	100	67.829	ENSCHIG00000011585	-	100	70.543	Capra_hircus
ENSPMEG00000013816	frg1	98	49.603	ENSTSYG00000031599	-	100	48.810	Carlito_syrichta
ENSPMEG00000013816	frg1	89	70.614	ENSCAPG00000016056	-	92	70.796	Cavia_aperea
ENSPMEG00000013816	frg1	100	70.817	ENSCPOG00000022277	-	100	70.817	Cavia_porcellus
ENSPMEG00000013816	frg1	100	69.261	ENSCCAG00000024627	FRG1	100	69.261	Cebus_capucinus
ENSPMEG00000013816	frg1	100	67.829	ENSCATG00000029230	FRG1	100	67.829	Cercocebus_atys
ENSPMEG00000013816	frg1	100	50.196	ENSCLAG00000006068	-	100	50.196	Chinchilla_lanigera
ENSPMEG00000013816	frg1	99	50.593	ENSCLAG00000009263	-	100	50.593	Chinchilla_lanigera
ENSPMEG00000013816	frg1	100	70.817	ENSCLAG00000000370	-	100	70.817	Chinchilla_lanigera
ENSPMEG00000013816	frg1	100	56.202	ENSCLAG00000004960	-	100	57.364	Chinchilla_lanigera
ENSPMEG00000013816	frg1	84	67.593	ENSCSAG00000017729	-	100	67.593	Chlorocebus_sabaeus
ENSPMEG00000013816	frg1	100	67.829	ENSCSAG00000002899	FRG1	100	67.829	Chlorocebus_sabaeus
ENSPMEG00000013816	frg1	87	72.973	ENSCPBG00000009211	-	86	72.973	Chrysemys_picta_bellii
ENSPMEG00000013816	frg1	99	46.816	ENSCING00000005161	-	99	47.191	Ciona_intestinalis
ENSPMEG00000013816	frg1	51	54.198	ENSCSAVG00000008018	-	100	48.634	Ciona_savignyi
ENSPMEG00000013816	frg1	100	67.829	ENSCANG00000020991	FRG1	100	67.829	Colobus_angolensis_palliatus
ENSPMEG00000013816	frg1	100	67.829	ENSCGRG00001014998	Frg1	100	70.930	Cricetulus_griseus_chok1gshd
ENSPMEG00000013816	frg1	100	56.420	ENSCGRG00000003902	-	96	56.420	Cricetulus_griseus_crigri
ENSPMEG00000013816	frg1	100	67.829	ENSCGRG00000011860	-	100	70.930	Cricetulus_griseus_crigri
ENSPMEG00000013816	frg1	96	81.148	ENSCSEG00000015950	frg1	100	81.148	Cynoglossus_semilaevis
ENSPMEG00000013816	frg1	100	90.196	ENSCVAG00000009985	frg1	100	90.196	Cyprinodon_variegatus
ENSPMEG00000013816	frg1	100	79.216	ENSDARG00000056504	frg1	100	81.690	Danio_rerio
ENSPMEG00000013816	frg1	100	68.217	ENSDNOG00000014886	FRG1	100	68.217	Dasypus_novemcinctus
ENSPMEG00000013816	frg1	100	60.465	ENSDORG00000016190	Frg1	100	60.853	Dipodomys_ordii
ENSPMEG00000013816	frg1	100	49.049	FBgn0036964	FRG1	100	49.049	Drosophila_melanogaster
ENSPMEG00000013816	frg1	100	66.667	ENSETEG00000012349	-	100	69.767	Echinops_telfairi
ENSPMEG00000013816	frg1	58	53.378	ENSEBUG00000012359	FRG1	89	53.378	Eptatretus_burgeri
ENSPMEG00000013816	frg1	100	69.261	ENSEASG00005017497	FRG1	100	69.261	Equus_asinus_asinus
ENSPMEG00000013816	frg1	100	69.261	ENSECAG00000003122	FRG1	100	69.261	Equus_caballus
ENSPMEG00000013816	frg1	62	71.338	ENSEEUG00000000145	-	100	71.338	Erinaceus_europaeus
ENSPMEG00000013816	frg1	100	79.216	ENSELUG00000021712	frg1	100	79.216	Esox_lucius
ENSPMEG00000013816	frg1	100	67.829	ENSFCAG00000025737	FRG1	100	70.543	Felis_catus
ENSPMEG00000013816	frg1	86	72.146	ENSFALG00000011231	-	85	73.148	Ficedula_albicollis
ENSPMEG00000013816	frg1	100	60.000	ENSFDAG00000012697	-	98	66.822	Fukomys_damarensis
ENSPMEG00000013816	frg1	100	70.039	ENSFDAG00000000962	-	100	70.428	Fukomys_damarensis
ENSPMEG00000013816	frg1	100	89.412	ENSFHEG00000010540	frg1	100	90.588	Fundulus_heteroclitus
ENSPMEG00000013816	frg1	100	77.255	ENSGMOG00000000867	frg1	100	77.255	Gadus_morhua
ENSPMEG00000013816	frg1	100	72.656	ENSGALG00000013590	-	100	72.656	Gallus_gallus
ENSPMEG00000013816	frg1	81	96.618	ENSGAFG00000013855	frg1	100	96.618	Gambusia_affinis
ENSPMEG00000013816	frg1	100	80.000	ENSGACG00000016888	frg1	100	80.000	Gasterosteus_aculeatus
ENSPMEG00000013816	frg1	100	71.875	ENSGAGG00000025012	-	100	70.312	Gopherus_agassizii
ENSPMEG00000013816	frg1	100	42.966	ENSGGOG00000040796	-	100	45.247	Gorilla_gorilla
ENSPMEG00000013816	frg1	68	64.000	ENSGGOG00000012888	-	88	64.368	Gorilla_gorilla
ENSPMEG00000013816	frg1	100	85.098	ENSHBUG00000010667	frg1	100	85.098	Haplochromis_burtoni
ENSPMEG00000013816	frg1	99	66.406	ENSHGLG00000020943	-	99	66.406	Heterocephalus_glaber_female
ENSPMEG00000013816	frg1	100	59.375	ENSHGLG00000001211	-	100	59.922	Heterocephalus_glaber_female
ENSPMEG00000013816	frg1	99	67.969	ENSHGLG00000020402	-	94	67.969	Heterocephalus_glaber_female
ENSPMEG00000013816	frg1	100	70.817	ENSHGLG00000005601	FRG1	100	70.817	Heterocephalus_glaber_female
ENSPMEG00000013816	frg1	100	55.469	ENSHGLG00100015285	-	100	54.297	Heterocephalus_glaber_male
ENSPMEG00000013816	frg1	100	71.206	ENSHGLG00100016261	-	100	71.206	Heterocephalus_glaber_male
ENSPMEG00000013816	frg1	99	66.406	ENSHGLG00100021211	-	99	66.406	Heterocephalus_glaber_male
ENSPMEG00000013816	frg1	100	59.766	ENSHGLG00100010674	-	100	60.311	Heterocephalus_glaber_male
ENSPMEG00000013816	frg1	88	79.111	ENSHCOG00000000224	frg1	96	79.111	Hippocampus_comes
ENSPMEG00000013816	frg1	100	78.988	ENSIPUG00000022716	frg1	100	78.599	Ictalurus_punctatus
ENSPMEG00000013816	frg1	100	68.217	ENSSTOG00000002857	-	100	68.217	Ictidomys_tridecemlineatus
ENSPMEG00000013816	frg1	100	67.829	ENSJJAG00000020625	Frg1	100	70.930	Jaculus_jaculus
ENSPMEG00000013816	frg1	100	86.667	ENSKMAG00000005841	frg1	100	86.667	Kryptolebias_marmoratus
ENSPMEG00000013816	frg1	100	83.529	ENSLBEG00000001466	frg1	100	83.529	Labrus_bergylta
ENSPMEG00000013816	frg1	100	59.387	ENSLACG00000010243	frg1	100	59.387	Latimeria_chalumnae
ENSPMEG00000013816	frg1	100	75.294	ENSLOCG00000013868	frg1	100	75.294	Lepisosteus_oculatus
ENSPMEG00000013816	frg1	100	67.442	ENSLAFG00000011191	FRG1	100	67.442	Loxodonta_africana
ENSPMEG00000013816	frg1	100	67.829	ENSMFAG00000031178	FRG1	100	67.829	Macaca_fascicularis
ENSPMEG00000013816	frg1	83	62.617	ENSMFAG00000042873	-	89	62.617	Macaca_fascicularis
ENSPMEG00000013816	frg1	100	67.829	ENSMMUG00000001824	FRG1	100	67.829	Macaca_mulatta
ENSPMEG00000013816	frg1	78	62.562	ENSMMUG00000047496	-	87	62.562	Macaca_mulatta
ENSPMEG00000013816	frg1	96	63.158	ENSMNEG00000018620	FRG1	100	66.397	Macaca_nemestrina
ENSPMEG00000013816	frg1	100	67.829	ENSMLEG00000028881	FRG1	100	67.829	Mandrillus_leucophaeus
ENSPMEG00000013816	frg1	100	85.098	ENSMAMG00000012406	frg1	100	85.098	Mastacembelus_armatus
ENSPMEG00000013816	frg1	100	84.706	ENSMZEG00005007549	frg1	100	84.706	Maylandia_zebra
ENSPMEG00000013816	frg1	100	72.656	ENSMGAG00000011481	-	100	72.656	Meleagris_gallopavo
ENSPMEG00000013816	frg1	100	67.829	ENSMAUG00000000847	Frg1	100	70.930	Mesocricetus_auratus
ENSPMEG00000013816	frg1	100	67.829	ENSMICG00000046816	FRG1	100	69.767	Microcebus_murinus
ENSPMEG00000013816	frg1	100	62.257	ENSMOCG00000023000	Frg1	100	62.257	Microtus_ochrogaster
ENSPMEG00000013816	frg1	88	82.143	ENSMMOG00000004008	frg1	95	82.143	Mola_mola
ENSPMEG00000013816	frg1	100	66.667	ENSMODG00000019031	-	87	66.667	Monodelphis_domestica
ENSPMEG00000013816	frg1	100	82.353	ENSMALG00000018497	frg1	100	82.353	Monopterus_albus
ENSPMEG00000013816	frg1	100	67.442	MGP_CAROLIEiJ_G0031006	Frg1	100	69.380	Mus_caroli
ENSPMEG00000013816	frg1	100	67.442	ENSMUSG00000031590	Frg1	100	69.380	Mus_musculus
ENSPMEG00000013816	frg1	100	67.829	MGP_PahariEiJ_G0021475	Frg1	100	70.930	Mus_pahari
ENSPMEG00000013816	frg1	100	67.054	MGP_SPRETEiJ_G0032120	Frg1	100	68.992	Mus_spretus
ENSPMEG00000013816	frg1	100	67.829	ENSMPUG00000017962	FRG1	100	70.543	Mustela_putorius_furo
ENSPMEG00000013816	frg1	100	69.650	ENSMLUG00000023179	FRG1	100	69.650	Myotis_lucifugus
ENSPMEG00000013816	frg1	100	67.442	ENSNGAG00000016411	Frg1	100	70.543	Nannospalax_galili
ENSPMEG00000013816	frg1	81	77.778	ENSNBRG00000006806	frg1	95	77.778	Neolamprologus_brichardi
ENSPMEG00000013816	frg1	100	47.082	ENSNLEG00000032846	-	100	58.929	Nomascus_leucogenys
ENSPMEG00000013816	frg1	100	68.482	ENSNLEG00000000930	FRG1	100	68.482	Nomascus_leucogenys
ENSPMEG00000013816	frg1	100	60.153	ENSNLEG00000035849	-	100	60.153	Nomascus_leucogenys
ENSPMEG00000013816	frg1	78	62.687	ENSNLEG00000028874	-	91	62.687	Nomascus_leucogenys
ENSPMEG00000013816	frg1	78	63.682	ENSNLEG00000036059	-	86	63.682	Nomascus_leucogenys
ENSPMEG00000013816	frg1	100	57.752	ENSNLEG00000032333	-	100	57.752	Nomascus_leucogenys
ENSPMEG00000013816	frg1	60	69.737	ENSMEUG00000007509	-	59	69.737	Notamacropus_eugenii
ENSPMEG00000013816	frg1	100	60.311	ENSOPRG00000004722	-	100	60.311	Ochotona_princeps
ENSPMEG00000013816	frg1	100	52.734	ENSODEG00000006953	-	100	51.953	Octodon_degus
ENSPMEG00000013816	frg1	100	70.817	ENSODEG00000006458	-	100	70.817	Octodon_degus
ENSPMEG00000013816	frg1	100	85.547	ENSONIG00000010162	frg1	100	85.547	Oreochromis_niloticus
ENSPMEG00000013816	frg1	74	68.085	ENSOANG00000005659	-	80	70.556	Ornithorhynchus_anatinus
ENSPMEG00000013816	frg1	100	67.829	ENSOCUG00000009038	-	100	70.930	Oryctolagus_cuniculus
ENSPMEG00000013816	frg1	96	81.967	ENSORLG00000008106	frg1	89	81.967	Oryzias_latipes
ENSPMEG00000013816	frg1	100	82.745	ENSORLG00020014355	frg1	100	82.745	Oryzias_latipes_hni
ENSPMEG00000013816	frg1	100	83.137	ENSORLG00015014159	frg1	100	83.137	Oryzias_latipes_hsok
ENSPMEG00000013816	frg1	85	78.704	ENSOMEG00000002468	frg1	89	78.704	Oryzias_melastigma
ENSPMEG00000013816	frg1	100	70.155	ENSOGAG00000005749	-	100	67.442	Otolemur_garnettii
ENSPMEG00000013816	frg1	100	66.667	ENSOARG00000008592	FRG1	100	69.349	Ovis_aries
ENSPMEG00000013816	frg1	96	50.965	ENSPPAG00000043174	-	100	50.787	Pan_paniscus
ENSPMEG00000013816	frg1	84	67.130	ENSPPAG00000043170	-	100	67.130	Pan_paniscus
ENSPMEG00000013816	frg1	100	67.442	ENSPPRG00000025003	-	100	70.155	Panthera_pardus
ENSPMEG00000013816	frg1	100	67.704	ENSPPRG00000019777	-	100	67.704	Panthera_pardus
ENSPMEG00000013816	frg1	100	67.442	ENSPTIG00000006588	-	100	70.155	Panthera_tigris_altaica
ENSPMEG00000013816	frg1	100	68.093	ENSPTIG00000006566	-	100	68.093	Panthera_tigris_altaica
ENSPMEG00000013816	frg1	100	67.442	ENSPTRG00000050205	-	100	67.442	Pan_troglodytes
ENSPMEG00000013816	frg1	95	55.102	ENSPTRG00000052363	-	94	60.396	Pan_troglodytes
ENSPMEG00000013816	frg1	88	57.576	ENSPTRG00000043123	-	94	57.511	Pan_troglodytes
ENSPMEG00000013816	frg1	96	55.870	ENSPTRG00000044710	-	100	55.870	Pan_troglodytes
ENSPMEG00000013816	frg1	96	54.656	ENSPTRG00000050204	-	100	54.656	Pan_troglodytes
ENSPMEG00000013816	frg1	100	67.442	ENSPTRG00000016671	-	100	67.442	Pan_troglodytes
ENSPMEG00000013816	frg1	69	63.889	ENSPANG00000031530	-	84	63.889	Papio_anubis
ENSPMEG00000013816	frg1	100	71.094	ENSPKIG00000024189	frg1	100	71.094	Paramormyrops_kingsleyae
ENSPMEG00000013816	frg1	84	73.488	ENSPSIG00000017971	-	82	73.488	Pelodiscus_sinensis
ENSPMEG00000013816	frg1	98	76.587	ENSPMGG00000019273	frg1	100	76.707	Periophthalmus_magnuspinnatus
ENSPMEG00000013816	frg1	100	67.829	ENSPEMG00000000650	Frg1	100	70.930	Peromyscus_maniculatus_bairdii
ENSPMEG00000013816	frg1	100	68.605	ENSPCIG00000007530	-	69	68.605	Phascolarctos_cinereus
ENSPMEG00000013816	frg1	100	99.216	ENSPFOG00000006721	frg1	100	99.216	Poecilia_formosa
ENSPMEG00000013816	frg1	55	89.286	ENSPLAG00000005321	frg1	83	89.286	Poecilia_latipinna
ENSPMEG00000013816	frg1	100	98.431	ENSPREG00000000097	frg1	100	98.431	Poecilia_reticulata
ENSPMEG00000013816	frg1	56	71.724	ENSPPYG00000029810	-	100	71.724	Pongo_abelii
ENSPMEG00000013816	frg1	62	65.190	ENSPPYG00000011275	-	87	65.190	Pongo_abelii
ENSPMEG00000013816	frg1	95	65.854	ENSPCAG00000014953	-	100	66.667	Procavia_capensis
ENSPMEG00000013816	frg1	79	54.902	ENSPCOG00000022726	FRG1	95	58.824	Propithecus_coquereli
ENSPMEG00000013816	frg1	100	54.264	ENSPVAG00000010551	FRG1	100	54.264	Pteropus_vampyrus
ENSPMEG00000013816	frg1	67	86.628	ENSPNYG00000015209	frg1	74	86.628	Pundamilia_nyererei
ENSPMEG00000013816	frg1	100	78.431	ENSPNAG00000013259	frg1	100	76.863	Pygocentrus_nattereri
ENSPMEG00000013816	frg1	100	67.442	ENSRNOG00000009846	Frg1	100	69.380	Rattus_norvegicus
ENSPMEG00000013816	frg1	89	65.939	ENSRBIG00000042219	-	96	65.939	Rhinopithecus_bieti
ENSPMEG00000013816	frg1	100	65.891	ENSRROG00000015523	FRG1	100	65.116	Rhinopithecus_roxellana
ENSPMEG00000013816	frg1	82	65.403	ENSRROG00000032084	-	88	65.403	Rhinopithecus_roxellana
ENSPMEG00000013816	frg1	100	69.650	ENSSBOG00000034175	FRG1	100	69.650	Saimiri_boliviensis_boliviensis
ENSPMEG00000013816	frg1	100	68.217	ENSSHAG00000005886	-	100	68.217	Sarcophilus_harrisii
ENSPMEG00000013816	frg1	97	75.000	ENSSFOG00015021361	frg1	99	75.000	Scleropages_formosus
ENSPMEG00000013816	frg1	100	80.392	ENSSMAG00000001213	frg1	100	80.392	Scophthalmus_maximus
ENSPMEG00000013816	frg1	100	86.667	ENSSDUG00000018886	frg1	100	86.667	Seriola_dumerili
ENSPMEG00000013816	frg1	100	85.882	ENSSLDG00000024191	frg1	100	85.882	Seriola_lalandi_dorsalis
ENSPMEG00000013816	frg1	65	71.429	ENSSARG00000002471	-	93	69.540	Sorex_araneus
ENSPMEG00000013816	frg1	100	69.804	ENSSPUG00000017326	-	100	68.627	Sphenodon_punctatus
ENSPMEG00000013816	frg1	100	78.431	ENSSPAG00000013294	frg1	100	78.431	Stegastes_partitus
ENSPMEG00000013816	frg1	100	67.829	ENSSSCG00000006996	FRG1	100	70.930	Sus_scrofa
ENSPMEG00000013816	frg1	100	71.484	ENSTGUG00000007028	-	100	71.484	Taeniopygia_guttata
ENSPMEG00000013816	frg1	100	81.961	ENSTRUG00000016208	frg1	100	81.961	Takifugu_rubripes
ENSPMEG00000013816	frg1	100	81.569	ENSTNIG00000007128	frg1	100	81.569	Tetraodon_nigroviridis
ENSPMEG00000013816	frg1	100	67.054	ENSTBEG00000014491	-	100	67.054	Tupaia_belangeri
ENSPMEG00000013816	frg1	78	45.455	ENSTBEG00000017605	-	99	45.455	Tupaia_belangeri
ENSPMEG00000013816	frg1	83	50.237	ENSTBEG00000012789	-	99	50.237	Tupaia_belangeri
ENSPMEG00000013816	frg1	100	67.054	ENSTTRG00000003429	FRG1	100	70.155	Tursiops_truncatus
ENSPMEG00000013816	frg1	96	65.854	ENSUAMG00000012123	-	100	64.898	Ursus_americanus
ENSPMEG00000013816	frg1	100	67.829	ENSUMAG00000021119	FRG1	100	70.543	Ursus_maritimus
ENSPMEG00000013816	frg1	100	65.504	ENSVPAG00000000616	FRG1	100	66.023	Vicugna_pacos
ENSPMEG00000013816	frg1	87	70.404	ENSVPAG00000011977	-	94	70.404	Vicugna_pacos
ENSPMEG00000013816	frg1	83	71.698	ENSVVUG00000007181	-	77	71.698	Vulpes_vulpes
ENSPMEG00000013816	frg1	100	70.312	ENSXETG00000012470	frg1	100	69.141	Xenopus_tropicalis
ENSPMEG00000013816	frg1	100	90.588	ENSXCOG00000005312	frg1	100	88.123	Xiphophorus_couchianus
ENSPMEG00000013816	frg1	100	98.039	ENSXMAG00000007751	frg1	100	98.039	Xiphophorus_maculatus