EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000013853 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA-binding motif%2C single-stranded-interacting protein 3-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 18475 bases
Position: chrKQ553484.1:13042-31516
Accession: 106907160
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000028639	RRM_1	PF00076.22	3.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000018973	-	461	XM_014972743	ENSPMEP00000028639	123 (aa)	XP_014828229	-

Gene Model

Click here to download ENSPMEG00000013853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000013853's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000013853	-	66	34.615	ENSPMEG00000000283	ELAVL1	69	34.615
ENSPMEG00000013853	-	63	38.462	ENSPMEG00000010156	elavl3	63	38.462
ENSPMEG00000013853	-	82	34.146	ENSPMEG00000015619	elavl4	58	38.462
ENSPMEG00000013853	-	60	39.189	ENSPMEG00000011603	-	58	39.189
ENSPMEG00000013853	-	64	39.744	ENSPMEG00000021929	ELAVL2	57	39.744
ENSPMEG00000013853	-	71	34.286	ENSPMEG00000002868	elavl1a	64	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000013853	-	78	84.694	ENSCAFG00020024980	RBMS3	69	82.524	Canis_lupus_dingo
ENSPMEG00000013853	-	80	84.848	ENSCVAG00000022814	-	58	84.848	Cyprinodon_variegatus
ENSPMEG00000013853	-	63	98.718	ENSDARG00000044574	rbms3	65	84.848	Danio_rerio
ENSPMEG00000013853	-	64	79.747	ENSEBUG00000005830	rbms3	61	79.747	Eptatretus_burgeri
ENSPMEG00000013853	-	67	93.976	ENSFHEG00000016746	-	71	85.149	Fundulus_heteroclitus
ENSPMEG00000013853	-	78	82.828	ENSPLAG00000005161	-	68	75.833	Poecilia_latipinna
ENSPMEG00000013853	-	95	97.436	ENSPLAG00000002862	-	73	97.436	Poecilia_latipinna