EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000014155 (Gene tree)
Gene ID: 106924820
Gene Symbol: nom1
Alias: -
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 12601 bases
Position: chrKQ551705.1:124146-136746
Accession: 106924820
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000028820	MA3	PF02847.17	4.4e-23	1	1
ENSPMEP00000028817	MA3	PF02847.17	4.4e-23	1	1
ENSPMEP00000028817	MIF4G	PF02854.19	1.6e-18	1	1
ENSPMEP00000028820	MIF4G	PF02854.19	1.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000031631	-	6667	XM_014998702	ENSPMEP00000028820	840 (aa)	XP_014854188	UPI00072E996A
ENSPMET00000031627	-	6586	-	ENSPMEP00000028817	813 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000014155's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000014155's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000014155	nom1	98	54.382	ENSG00000146909	NOM1	60	68.269	Homo_sapiens
ENSPMEG00000014155	nom1	66	87.617	ENSAPOG00000012073	nom1	99	74.562	Acanthochromis_polyacanthus
ENSPMEG00000014155	nom1	81	59.019	ENSAMEG00000001412	NOM1	96	57.632	Ailuropoda_melanoleuca
ENSPMEG00000014155	nom1	88	87.023	ENSACIG00000018050	nom1	100	72.170	Amphilophus_citrinellus
ENSPMEG00000014155	nom1	99	74.140	ENSAOCG00000006229	nom1	99	74.356	Amphiprion_ocellaris
ENSPMEG00000014155	nom1	99	74.405	ENSAPEG00000015994	nom1	99	74.031	Amphiprion_percula
ENSPMEG00000014155	nom1	99	76.149	ENSATEG00000005405	nom1	99	75.357	Anabas_testudineus
ENSPMEG00000014155	nom1	79	60.301	ENSAPLG00000006585	NOM1	98	58.744	Anas_platyrhynchos
ENSPMEG00000014155	nom1	73	61.000	ENSACAG00000011192	NOM1	84	65.169	Anolis_carolinensis
ENSPMEG00000014155	nom1	98	75.121	ENSACLG00000000033	nom1	100	74.558	Astatotilapia_calliptera
ENSPMEG00000014155	nom1	63	74.765	ENSAMXG00000041486	nom1	86	74.765	Astyanax_mexicanus
ENSPMEG00000014155	nom1	98	51.981	ENSBTAG00000016435	NOM1	61	64.627	Bos_taurus
ENSPMEG00000014155	nom1	98	54.676	ENSCJAG00000004336	NOM1	60	67.500	Callithrix_jacchus
ENSPMEG00000014155	nom1	98	52.593	ENSCAFG00020005121	NOM1	97	51.740	Canis_lupus_dingo
ENSPMEG00000014155	nom1	97	56.473	ENSTSYG00000000227	NOM1	62	67.625	Carlito_syrichta
ENSPMEG00000014155	nom1	63	68.208	ENSCAPG00000016273	NOM1	99	68.208	Cavia_aperea
ENSPMEG00000014155	nom1	98	53.244	ENSCPOG00000025538	NOM1	96	51.054	Cavia_porcellus
ENSPMEG00000014155	nom1	89	67.619	ENSCCAG00000014944	NOM1	99	66.761	Cebus_capucinus
ENSPMEG00000014155	nom1	81	59.496	ENSCLAG00000000267	NOM1	61	65.900	Chinchilla_lanigera
ENSPMEG00000014155	nom1	74	67.803	ENSCPBG00000018215	NOM1	84	67.803	Chrysemys_picta_bellii
ENSPMEG00000014155	nom1	86	36.835	ENSCING00000005248	-	93	38.429	Ciona_intestinalis
ENSPMEG00000014155	nom1	64	67.692	ENSCANG00000041984	NOM1	89	67.692	Colobus_angolensis_palliatus
ENSPMEG00000014155	nom1	81	59.618	ENSCGRG00001020293	Nom1	96	53.477	Cricetulus_griseus_chok1gshd
ENSPMEG00000014155	nom1	64	67.630	ENSCGRG00000005405	Nom1	97	67.630	Cricetulus_griseus_crigri
ENSPMEG00000014155	nom1	95	69.750	ENSCSEG00000000932	nom1	99	67.282	Cynoglossus_semilaevis
ENSPMEG00000014155	nom1	100	80.664	ENSCVAG00000007562	nom1	100	80.118	Cyprinodon_variegatus
ENSPMEG00000014155	nom1	99	60.660	ENSDARG00000060027	nom1	100	74.538	Danio_rerio
ENSPMEG00000014155	nom1	64	57.333	ENSDORG00000015682	Nom1	99	50.642	Dipodomys_ordii
ENSPMEG00000014155	nom1	77	37.021	FBgn0035336	CG9004	77	35.879	Drosophila_melanogaster
ENSPMEG00000014155	nom1	72	56.667	ENSETEG00000003104	NOM1	89	56.667	Echinops_telfairi
ENSPMEG00000014155	nom1	53	49.312	ENSEBUG00000010077	nom1	96	49.312	Eptatretus_burgeri
ENSPMEG00000014155	nom1	81	62.162	ENSEASG00005001489	NOM1	96	54.765	Equus_asinus_asinus
ENSPMEG00000014155	nom1	67	66.850	ENSECAG00000007596	NOM1	90	54.225	Equus_caballus
ENSPMEG00000014155	nom1	68	77.132	ENSELUG00000006266	nom1	87	79.395	Esox_lucius
ENSPMEG00000014155	nom1	80	59.380	ENSFCAG00000006467	NOM1	96	51.228	Felis_catus
ENSPMEG00000014155	nom1	80	60.029	ENSFALG00000006904	NOM1	99	57.644	Ficedula_albicollis
ENSPMEG00000014155	nom1	98	52.991	ENSFDAG00000016241	NOM1	63	65.769	Fukomys_damarensis
ENSPMEG00000014155	nom1	99	79.904	ENSFHEG00000015974	nom1	100	81.065	Fundulus_heteroclitus
ENSPMEG00000014155	nom1	94	61.187	ENSGMOG00000005129	nom1	99	61.347	Gadus_morhua
ENSPMEG00000014155	nom1	99	53.049	ENSGALG00000006437	NOM1	92	52.676	Gallus_gallus
ENSPMEG00000014155	nom1	100	93.120	ENSGAFG00000003211	nom1	100	93.001	Gambusia_affinis
ENSPMEG00000014155	nom1	82	59.649	ENSGAGG00000014347	NOM1	64	67.045	Gopherus_agassizii
ENSPMEG00000014155	nom1	67	65.934	ENSGGOG00000010920	NOM1	56	68.077	Gorilla_gorilla
ENSPMEG00000014155	nom1	98	74.879	ENSHBUG00000014616	nom1	100	73.852	Haplochromis_burtoni
ENSPMEG00000014155	nom1	98	54.470	ENSHGLG00000007392	NOM1	96	53.647	Heterocephalus_glaber_female
ENSPMEG00000014155	nom1	86	68.590	ENSHGLG00100014407	NOM1	96	53.647	Heterocephalus_glaber_male
ENSPMEG00000014155	nom1	65	71.456	ENSIPUG00000013980	nom1	99	58.706	Ictalurus_punctatus
ENSPMEG00000014155	nom1	72	62.775	ENSSTOG00000031736	NOM1	91	67.885	Ictidomys_tridecemlineatus
ENSPMEG00000014155	nom1	60	68.247	ENSJJAG00000011716	Nom1	98	68.247	Jaculus_jaculus
ENSPMEG00000014155	nom1	99	70.941	ENSLBEG00000009252	nom1	99	72.261	Labrus_bergylta
ENSPMEG00000014155	nom1	83	61.277	ENSLACG00000011777	NOM1	98	55.660	Latimeria_chalumnae
ENSPMEG00000014155	nom1	98	62.899	ENSLOCG00000012452	nom1	100	61.190	Lepisosteus_oculatus
ENSPMEG00000014155	nom1	98	49.200	ENSLAFG00000007119	NOM1	98	49.352	Loxodonta_africana
ENSPMEG00000014155	nom1	98	51.667	ENSMMUG00000039033	NOM1	96	51.568	Macaca_mulatta
ENSPMEG00000014155	nom1	64	67.692	ENSMLEG00000037062	NOM1	98	67.692	Mandrillus_leucophaeus
ENSPMEG00000014155	nom1	99	70.888	ENSMAMG00000004118	nom1	99	71.831	Mastacembelus_armatus
ENSPMEG00000014155	nom1	98	75.000	ENSMZEG00005000384	nom1	100	74.441	Maylandia_zebra
ENSPMEG00000014155	nom1	82	60.059	ENSMGAG00000005051	NOM1	99	59.292	Meleagris_gallopavo
ENSPMEG00000014155	nom1	81	60.714	ENSMAUG00000017988	Nom1	96	53.191	Mesocricetus_auratus
ENSPMEG00000014155	nom1	98	54.300	ENSMICG00000017531	NOM1	96	51.519	Microcebus_murinus
ENSPMEG00000014155	nom1	99	53.461	ENSMOCG00000015962	Nom1	96	52.497	Microtus_ochrogaster
ENSPMEG00000014155	nom1	99	66.667	ENSMMOG00000004419	nom1	99	66.548	Mola_mola
ENSPMEG00000014155	nom1	68	67.690	ENSMODG00000005177	NOM1	61	69.732	Monodelphis_domestica
ENSPMEG00000014155	nom1	93	72.484	ENSMALG00000008800	nom1	99	71.501	Monopterus_albus
ENSPMEG00000014155	nom1	97	54.423	MGP_CAROLIEiJ_G0027043	Nom1	94	52.467	Mus_caroli
ENSPMEG00000014155	nom1	97	54.202	ENSMUSG00000001569	Nom1	94	52.644	Mus_musculus
ENSPMEG00000014155	nom1	98	53.181	MGP_SPRETEiJ_G0028039	Nom1	94	52.518	Mus_spretus
ENSPMEG00000014155	nom1	81	55.947	ENSMPUG00000009745	NOM1	99	55.667	Mustela_putorius_furo
ENSPMEG00000014155	nom1	73	62.126	ENSMLUG00000009129	NOM1	87	66.985	Myotis_lucifugus
ENSPMEG00000014155	nom1	99	75.301	ENSNBRG00000016429	nom1	95	85.094	Neolamprologus_brichardi
ENSPMEG00000014155	nom1	98	52.701	ENSNLEG00000000238	NOM1	96	53.262	Nomascus_leucogenys
ENSPMEG00000014155	nom1	69	57.740	ENSMEUG00000001108	NOM1	81	51.955	Notamacropus_eugenii
ENSPMEG00000014155	nom1	53	56.667	ENSOPRG00000014676	NOM1	86	44.361	Ochotona_princeps
ENSPMEG00000014155	nom1	81	58.754	ENSODEG00000009399	NOM1	98	56.454	Octodon_degus
ENSPMEG00000014155	nom1	94	75.723	ENSONIG00000005958	nom1	99	76.131	Oreochromis_niloticus
ENSPMEG00000014155	nom1	57	67.387	ENSOANG00000006139	-	97	67.387	Ornithorhynchus_anatinus
ENSPMEG00000014155	nom1	89	53.005	ENSOCUG00000021448	-	98	54.493	Oryctolagus_cuniculus
ENSPMEG00000014155	nom1	98	56.181	ENSOCUG00000004071	-	96	54.414	Oryctolagus_cuniculus
ENSPMEG00000014155	nom1	100	71.140	ENSORLG00000010541	nom1	100	70.769	Oryzias_latipes
ENSPMEG00000014155	nom1	93	71.611	ENSORLG00020010789	nom1	100	71.975	Oryzias_latipes_hni
ENSPMEG00000014155	nom1	100	70.922	ENSORLG00015010475	nom1	100	71.720	Oryzias_latipes_hsok
ENSPMEG00000014155	nom1	100	71.986	ENSOMEG00000004219	nom1	100	72.459	Oryzias_melastigma
ENSPMEG00000014155	nom1	64	68.451	ENSOGAG00000001124	NOM1	85	68.451	Otolemur_garnettii
ENSPMEG00000014155	nom1	81	57.453	ENSOARG00000007261	NOM1	70	64.627	Ovis_aries
ENSPMEG00000014155	nom1	81	61.708	ENSPPAG00000041374	NOM1	60	67.885	Pan_paniscus
ENSPMEG00000014155	nom1	80	59.205	ENSPTIG00000013532	NOM1	71	66.154	Panthera_tigris_altaica
ENSPMEG00000014155	nom1	81	60.530	ENSPTRG00000019917	NOM1	60	67.885	Pan_troglodytes
ENSPMEG00000014155	nom1	98	54.804	ENSPANG00000007605	NOM1	96	53.775	Papio_anubis
ENSPMEG00000014155	nom1	100	59.597	ENSPKIG00000005825	nom1	100	59.091	Paramormyrops_kingsleyae
ENSPMEG00000014155	nom1	65	67.992	ENSPSIG00000017848	NOM1	88	67.992	Pelodiscus_sinensis
ENSPMEG00000014155	nom1	99	71.605	ENSPMGG00000002577	nom1	99	69.461	Periophthalmus_magnuspinnatus
ENSPMEG00000014155	nom1	98	54.182	ENSPEMG00000024180	Nom1	96	53.480	Peromyscus_maniculatus_bairdii
ENSPMEG00000014155	nom1	94	55.407	ENSPCIG00000027941	NOM1	90	54.191	Phascolarctos_cinereus
ENSPMEG00000014155	nom1	100	99.048	ENSPFOG00000015771	nom1	100	99.048	Poecilia_formosa
ENSPMEG00000014155	nom1	100	98.157	ENSPLAG00000007856	nom1	100	98.157	Poecilia_latipinna
ENSPMEG00000014155	nom1	100	93.832	ENSPREG00000008850	nom1	100	94.069	Poecilia_reticulata
ENSPMEG00000014155	nom1	81	55.965	ENSPPYG00000018222	NOM1	95	50.602	Pongo_abelii
ENSPMEG00000014155	nom1	79	61.860	ENSPCAG00000000440	NOM1	84	61.860	Procavia_capensis
ENSPMEG00000014155	nom1	64	66.346	ENSPCOG00000015222	NOM1	98	66.346	Propithecus_coquereli
ENSPMEG00000014155	nom1	81	58.667	ENSPVAG00000014760	NOM1	97	51.930	Pteropus_vampyrus
ENSPMEG00000014155	nom1	98	74.758	ENSPNYG00000006975	nom1	97	84.112	Pundamilia_nyererei
ENSPMEG00000014155	nom1	99	56.502	ENSPNAG00000011085	nom1	87	73.184	Pygocentrus_nattereri
ENSPMEG00000014155	nom1	97	51.902	ENSRNOG00000048969	AABR07059041.1	64	62.764	Rattus_norvegicus
ENSPMEG00000014155	nom1	98	53.735	ENSRBIG00000037042	NOM1	96	53.667	Rhinopithecus_bieti
ENSPMEG00000014155	nom1	98	53.614	ENSRROG00000037293	NOM1	96	53.551	Rhinopithecus_roxellana
ENSPMEG00000014155	nom1	51	61.985	ENSSHAG00000002835	-	99	61.985	Sarcophilus_harrisii
ENSPMEG00000014155	nom1	67	67.276	ENSSHAG00000017998	-	99	59.547	Sarcophilus_harrisii
ENSPMEG00000014155	nom1	60	71.811	ENSSFOG00015003196	nom1	100	71.811	Scleropages_formosus
ENSPMEG00000014155	nom1	99	72.909	ENSSMAG00000011047	nom1	99	72.963	Scophthalmus_maximus
ENSPMEG00000014155	nom1	99	75.090	ENSSDUG00000006834	nom1	100	74.853	Seriola_dumerili
ENSPMEG00000014155	nom1	99	74.850	ENSSLDG00000021812	nom1	100	75.030	Seriola_lalandi_dorsalis
ENSPMEG00000014155	nom1	87	48.069	ENSSPUG00000002556	NOM1	100	68.571	Sphenodon_punctatus
ENSPMEG00000014155	nom1	99	76.491	ENSSPAG00000000953	nom1	99	76.009	Stegastes_partitus
ENSPMEG00000014155	nom1	87	56.434	ENSTGUG00000000702	-	99	57.746	Taeniopygia_guttata
ENSPMEG00000014155	nom1	99	69.508	ENSTRUG00000010239	nom1	100	68.802	Takifugu_rubripes
ENSPMEG00000014155	nom1	98	69.068	ENSTNIG00000012783	nom1	100	68.820	Tetraodon_nigroviridis
ENSPMEG00000014155	nom1	80	60.805	ENSTTRG00000009691	NOM1	95	53.818	Tursiops_truncatus
ENSPMEG00000014155	nom1	81	58.671	ENSUAMG00000025450	NOM1	97	52.755	Ursus_americanus
ENSPMEG00000014155	nom1	81	60.030	ENSUMAG00000014275	NOM1	96	58.150	Ursus_maritimus
ENSPMEG00000014155	nom1	81	59.145	ENSVVUG00000002608	NOM1	57	69.231	Vulpes_vulpes
ENSPMEG00000014155	nom1	87	54.497	ENSXETG00000021611	nom1	82	72.683	Xenopus_tropicalis
ENSPMEG00000014155	nom1	100	92.536	ENSXMAG00000002451	nom1	100	92.417	Xiphophorus_maculatus