EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000014271 (Gene tree)
Gene ID: 106931372
Gene Symbol: larp4aa
Alias: -
Full Name: La ribonucleoprotein domain family member 4
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 22935 bases
Position: chrKQ552342.1:7852-30786
Accession: 106931372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000012108	La	PF05383.17	1.7e-17	1	1
ENSPMEP00000028892	La	PF05383.17	1.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000031660	-	5707	XM_015009466	ENSPMEP00000012108	788 (aa)	XP_014864952	UPI00072EC6AD
ENSPMET00000019466	-	5749	XM_015009465	ENSPMEP00000028892	802 (aa)	XP_014864951	UPI00072EE689

Gene Model

Click here to download ENSPMEG00000014271's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000014271's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000014271	larp4aa	95	48.148	ENSPMEG00000002720	larp4ab	99	47.126
ENSPMEG00000014271	larp4aa	83	39.266	ENSPMEG00000016361	LARP4B	84	37.283

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000014271	larp4aa	87	62.172	ENSG00000161813	LARP4	99	61.798	Homo_sapiens
ENSPMEG00000014271	larp4aa	100	86.527	ENSAPOG00000007142	larp4aa	100	86.279	Acanthochromis_polyacanthus
ENSPMEG00000014271	larp4aa	95	51.707	ENSAPOG00000021331	larp4ab	100	51.077	Acanthochromis_polyacanthus
ENSPMEG00000014271	larp4aa	95	49.361	ENSAMEG00000001275	LARP4	99	48.912	Ailuropoda_melanoleuca
ENSPMEG00000014271	larp4aa	100	79.850	ENSACIG00000001198	larp4aa	100	81.727	Amphilophus_citrinellus
ENSPMEG00000014271	larp4aa	100	86.946	ENSAOCG00000002408	larp4aa	100	85.961	Amphiprion_ocellaris
ENSPMEG00000014271	larp4aa	95	50.566	ENSAOCG00000006387	larp4ab	100	50.000	Amphiprion_ocellaris
ENSPMEG00000014271	larp4aa	100	86.560	ENSAPEG00000019058	larp4aa	100	85.573	Amphiprion_percula
ENSPMEG00000014271	larp4aa	100	83.354	ENSATEG00000020715	larp4aa	100	83.229	Anabas_testudineus
ENSPMEG00000014271	larp4aa	95	49.047	ENSATEG00000001018	larp4ab	100	48.223	Anabas_testudineus
ENSPMEG00000014271	larp4aa	95	50.573	ENSAPLG00000013661	LARP4	99	51.523	Anas_platyrhynchos
ENSPMEG00000014271	larp4aa	95	50.515	ENSACAG00000017133	LARP4	96	48.980	Anolis_carolinensis
ENSPMEG00000014271	larp4aa	87	61.798	ENSANAG00000029342	LARP4	99	61.798	Aotus_nancymaae
ENSPMEG00000014271	larp4aa	100	82.051	ENSACLG00000002575	larp4aa	100	82.051	Astatotilapia_calliptera
ENSPMEG00000014271	larp4aa	100	63.571	ENSAMXG00000036493	larp4aa	100	64.286	Astyanax_mexicanus
ENSPMEG00000014271	larp4aa	100	50.850	ENSAMXG00000001515	larp4ab	100	53.301	Astyanax_mexicanus
ENSPMEG00000014271	larp4aa	82	63.073	ENSCJAG00000021131	LARP4	99	61.049	Callithrix_jacchus
ENSPMEG00000014271	larp4aa	88	59.649	ENSCAFG00020014554	LARP4	99	59.649	Canis_lupus_dingo
ENSPMEG00000014271	larp4aa	95	49.486	ENSTSYG00000004342	LARP4	96	63.733	Carlito_syrichta
ENSPMEG00000014271	larp4aa	94	38.684	ENSCAPG00000012942	LARP4	91	45.777	Cavia_aperea
ENSPMEG00000014271	larp4aa	95	45.714	ENSCPOG00000020519	LARP4	99	45.844	Cavia_porcellus
ENSPMEG00000014271	larp4aa	87	61.049	ENSCCAG00000024439	LARP4	99	61.049	Cebus_capucinus
ENSPMEG00000014271	larp4aa	95	46.299	ENSCATG00000044528	LARP4	99	46.701	Cercocebus_atys
ENSPMEG00000014271	larp4aa	95	48.333	ENSCLAG00000001829	LARP4	99	48.333	Chinchilla_lanigera
ENSPMEG00000014271	larp4aa	98	50.185	ENSCPBG00000019407	LARP4	92	50.369	Chrysemys_picta_bellii
ENSPMEG00000014271	larp4aa	87	61.798	ENSCANG00000029159	-	99	61.798	Colobus_angolensis_palliatus
ENSPMEG00000014271	larp4aa	95	44.106	ENSCANG00000033097	-	89	60.429	Colobus_angolensis_palliatus
ENSPMEG00000014271	larp4aa	95	49.424	ENSCGRG00001010818	Larp4	99	47.788	Cricetulus_griseus_chok1gshd
ENSPMEG00000014271	larp4aa	95	49.424	ENSCGRG00000009382	Larp4	100	47.788	Cricetulus_griseus_crigri
ENSPMEG00000014271	larp4aa	61	54.713	ENSCSEG00000003240	larp4ab	92	49.218	Cynoglossus_semilaevis
ENSPMEG00000014271	larp4aa	100	81.028	ENSCSEG00000001963	larp4aa	100	81.151	Cynoglossus_semilaevis
ENSPMEG00000014271	larp4aa	100	89.136	ENSCVAG00000005488	larp4aa	100	89.630	Cyprinodon_variegatus
ENSPMEG00000014271	larp4aa	95	51.414	ENSDARG00000074979	larp4ab	78	86.232	Danio_rerio
ENSPMEG00000014271	larp4aa	100	63.062	ENSDARG00000078401	larp4aa	100	63.183	Danio_rerio
ENSPMEG00000014271	larp4aa	95	48.784	ENSDNOG00000038525	LARP4	99	47.564	Dasypus_novemcinctus
ENSPMEG00000014271	larp4aa	82	57.407	ENSDORG00000004013	Larp4	99	45.340	Dipodomys_ordii
ENSPMEG00000014271	larp4aa	69	54.348	ENSETEG00000011683	LARP4	72	53.818	Echinops_telfairi
ENSPMEG00000014271	larp4aa	70	38.821	ENSEBUG00000010394	LARP4	85	38.581	Eptatretus_burgeri
ENSPMEG00000014271	larp4aa	95	47.570	ENSEASG00005004356	LARP4	100	58.898	Equus_asinus_asinus
ENSPMEG00000014271	larp4aa	95	49.744	ENSECAG00000012479	LARP4	99	49.796	Equus_caballus
ENSPMEG00000014271	larp4aa	53	85.470	ENSEEUG00000000316	LARP4	57	85.470	Erinaceus_europaeus
ENSPMEG00000014271	larp4aa	66	82.301	ENSELUG00000018650	larp4ab	84	80.702	Esox_lucius
ENSPMEG00000014271	larp4aa	100	62.349	ENSELUG00000000395	larp4aa	100	62.228	Esox_lucius
ENSPMEG00000014271	larp4aa	82	63.102	ENSFCAG00000031897	LARP4	96	63.200	Felis_catus
ENSPMEG00000014271	larp4aa	80	52.055	ENSFALG00000002114	LARP4	95	52.632	Ficedula_albicollis
ENSPMEG00000014271	larp4aa	95	49.045	ENSFDAG00000006406	-	99	48.662	Fukomys_damarensis
ENSPMEG00000014271	larp4aa	100	88.533	ENSFHEG00000004338	larp4aa	100	88.779	Fundulus_heteroclitus
ENSPMEG00000014271	larp4aa	95	46.753	ENSFHEG00000013854	larp4ab	99	45.490	Fundulus_heteroclitus
ENSPMEG00000014271	larp4aa	100	71.482	ENSGMOG00000008246	larp4aa	100	71.554	Gadus_morhua
ENSPMEG00000014271	larp4aa	91	49.804	ENSGALG00000042122	LARP4	92	51.527	Gallus_gallus
ENSPMEG00000014271	larp4aa	95	48.404	ENSGAFG00000021777	larp4ab	99	46.760	Gambusia_affinis
ENSPMEG00000014271	larp4aa	100	77.222	ENSGACG00000008381	larp4aa	98	89.197	Gasterosteus_aculeatus
ENSPMEG00000014271	larp4aa	95	49.556	ENSGACG00000000680	larp4ab	88	64.075	Gasterosteus_aculeatus
ENSPMEG00000014271	larp4aa	95	51.476	ENSGAGG00000006969	LARP4	99	51.465	Gopherus_agassizii
ENSPMEG00000014271	larp4aa	83	55.985	ENSGGOG00000015230	LARP4	94	61.423	Gorilla_gorilla
ENSPMEG00000014271	larp4aa	100	81.807	ENSHBUG00000023074	larp4aa	100	81.807	Haplochromis_burtoni
ENSPMEG00000014271	larp4aa	81	50.233	ENSHGLG00000013875	-	96	49.611	Heterocephalus_glaber_female
ENSPMEG00000014271	larp4aa	86	49.716	ENSHGLG00000005513	-	98	49.716	Heterocephalus_glaber_female
ENSPMEG00000014271	larp4aa	95	47.082	ENSHGLG00100011678	-	99	46.494	Heterocephalus_glaber_male
ENSPMEG00000014271	larp4aa	95	48.582	ENSHGLG00100016984	-	99	48.780	Heterocephalus_glaber_male
ENSPMEG00000014271	larp4aa	100	75.556	ENSHCOG00000015951	larp4aa	100	75.432	Hippocampus_comes
ENSPMEG00000014271	larp4aa	95	47.876	ENSHCOG00000020857	larp4ab	100	47.112	Hippocampus_comes
ENSPMEG00000014271	larp4aa	100	61.779	ENSIPUG00000007514	larp4aa	100	61.779	Ictalurus_punctatus
ENSPMEG00000014271	larp4aa	95	48.898	ENSIPUG00000021659	larp4ab	99	47.520	Ictalurus_punctatus
ENSPMEG00000014271	larp4aa	95	49.809	ENSSTOG00000003553	LARP4	99	49.239	Ictidomys_tridecemlineatus
ENSPMEG00000014271	larp4aa	100	85.502	ENSKMAG00000006800	larp4aa	100	85.130	Kryptolebias_marmoratus
ENSPMEG00000014271	larp4aa	95	47.771	ENSKMAG00000018556	larp4ab	100	47.776	Kryptolebias_marmoratus
ENSPMEG00000014271	larp4aa	97	83.686	ENSLBEG00000014537	larp4aa	100	81.840	Labrus_bergylta
ENSPMEG00000014271	larp4aa	95	50.641	ENSLBEG00000019306	larp4ab	100	49.745	Labrus_bergylta
ENSPMEG00000014271	larp4aa	99	51.028	ENSLACG00000019090	LARP4	99	51.259	Latimeria_chalumnae
ENSPMEG00000014271	larp4aa	100	59.734	ENSLOCG00000007113	larp4ab	100	60.440	Lepisosteus_oculatus
ENSPMEG00000014271	larp4aa	95	46.317	ENSLAFG00000005160	LARP4	100	47.576	Loxodonta_africana
ENSPMEG00000014271	larp4aa	82	63.612	ENSMFAG00000043681	LARP4	99	61.798	Macaca_fascicularis
ENSPMEG00000014271	larp4aa	82	63.612	ENSMMUG00000008172	LARP4	99	61.798	Macaca_mulatta
ENSPMEG00000014271	larp4aa	79	50.867	ENSMNEG00000037799	-	80	71.429	Macaca_nemestrina
ENSPMEG00000014271	larp4aa	94	47.906	ENSMNEG00000034602	LARP4	98	49.788	Macaca_nemestrina
ENSPMEG00000014271	larp4aa	87	61.798	ENSMLEG00000039661	LARP4	99	61.798	Mandrillus_leucophaeus
ENSPMEG00000014271	larp4aa	100	85.012	ENSMAMG00000011206	larp4aa	100	83.907	Mastacembelus_armatus
ENSPMEG00000014271	larp4aa	95	50.963	ENSMAMG00000002616	larp4ab	100	50.386	Mastacembelus_armatus
ENSPMEG00000014271	larp4aa	100	82.418	ENSMZEG00005001813	larp4aa	100	82.295	Maylandia_zebra
ENSPMEG00000014271	larp4aa	91	49.141	ENSMGAG00000010598	LARP4	92	50.466	Meleagris_gallopavo
ENSPMEG00000014271	larp4aa	80	64.407	ENSMICG00000030156	-	89	62.626	Microcebus_murinus
ENSPMEG00000014271	larp4aa	74	84.615	ENSMICG00000012388	-	97	84.615	Microcebus_murinus
ENSPMEG00000014271	larp4aa	100	78.642	ENSMMOG00000004785	larp4aa	100	78.064	Mola_mola
ENSPMEG00000014271	larp4aa	95	46.214	ENSMMOG00000021861	larp4ab	92	58.453	Mola_mola
ENSPMEG00000014271	larp4aa	72	64.286	MGP_CAROLIEiJ_G0020281	Larp4	83	64.174	Mus_caroli
ENSPMEG00000014271	larp4aa	95	47.184	ENSMUSG00000023025	Larp4	99	48.214	Mus_musculus
ENSPMEG00000014271	larp4aa	95	47.309	MGP_PahariEiJ_G0020284	Larp4	99	48.917	Mus_pahari
ENSPMEG00000014271	larp4aa	95	48.535	ENSMLUG00000012513	-	99	47.854	Myotis_lucifugus
ENSPMEG00000014271	larp4aa	100	82.173	ENSNBRG00000011292	larp4aa	100	81.929	Neolamprologus_brichardi
ENSPMEG00000014271	larp4aa	87	62.547	ENSNLEG00000017798	LARP4	99	62.172	Nomascus_leucogenys
ENSPMEG00000014271	larp4aa	95	47.815	ENSODEG00000009770	LARP4	100	47.765	Octodon_degus
ENSPMEG00000014271	larp4aa	100	82.170	ENSONIG00000011895	larp4aa	100	82.918	Oreochromis_niloticus
ENSPMEG00000014271	larp4aa	95	47.704	ENSONIG00000019124	larp4ab	99	47.704	Oreochromis_niloticus
ENSPMEG00000014271	larp4aa	64	55.762	ENSOANG00000004373	LARP4	93	56.134	Ornithorhynchus_anatinus
ENSPMEG00000014271	larp4aa	95	48.686	ENSOCUG00000026872	-	99	49.116	Oryctolagus_cuniculus
ENSPMEG00000014271	larp4aa	95	48.246	ENSOCUG00000021417	-	99	48.363	Oryctolagus_cuniculus
ENSPMEG00000014271	larp4aa	100	76.658	ENSORLG00000006758	larp4aa	100	76.355	Oryzias_latipes
ENSPMEG00000014271	larp4aa	100	76.420	ENSORLG00020010258	larp4aa	100	76.478	Oryzias_latipes_hni
ENSPMEG00000014271	larp4aa	100	75.676	ENSORLG00015002292	larp4aa	100	75.616	Oryzias_latipes_hsok
ENSPMEG00000014271	larp4aa	100	74.566	ENSOMEG00000019749	larp4aa	96	85.795	Oryzias_melastigma
ENSPMEG00000014271	larp4aa	64	50.814	ENSOGAG00000001415	LARP4	99	52.820	Otolemur_garnettii
ENSPMEG00000014271	larp4aa	67	63.613	ENSPPAG00000035100	LARP4	91	59.611	Pan_paniscus
ENSPMEG00000014271	larp4aa	82	63.102	ENSPPRG00000004522	LARP4	96	63.200	Panthera_pardus
ENSPMEG00000014271	larp4aa	82	63.102	ENSPTIG00000015617	LARP4	96	63.200	Panthera_tigris_altaica
ENSPMEG00000014271	larp4aa	87	62.172	ENSPTRG00000004935	LARP4	99	61.798	Pan_troglodytes
ENSPMEG00000014271	larp4aa	87	62.547	ENSPANG00000022964	LARP4	99	62.547	Papio_anubis
ENSPMEG00000014271	larp4aa	100	58.816	ENSPKIG00000005950	larp4ab	100	58.293	Paramormyrops_kingsleyae
ENSPMEG00000014271	larp4aa	96	49.114	ENSPSIG00000015867	LARP4	100	49.054	Pelodiscus_sinensis
ENSPMEG00000014271	larp4aa	52	58.468	ENSPMAG00000002788	LARP4	97	41.250	Petromyzon_marinus
ENSPMEG00000014271	larp4aa	96	49.298	ENSPCIG00000000384	LARP4	99	49.365	Phascolarctos_cinereus
ENSPMEG00000014271	larp4aa	95	48.458	ENSPFOG00000009764	larp4ab	99	47.871	Poecilia_formosa
ENSPMEG00000014271	larp4aa	100	99.751	ENSPFOG00000013148	larp4aa	100	99.751	Poecilia_formosa
ENSPMEG00000014271	larp4aa	95	48.645	ENSPLAG00000008502	larp4ab	99	47.742	Poecilia_latipinna
ENSPMEG00000014271	larp4aa	100	99.239	ENSPLAG00000013626	larp4aa	100	99.239	Poecilia_latipinna
ENSPMEG00000014271	larp4aa	100	97.970	ENSPREG00000022597	larp4aa	100	97.970	Poecilia_reticulata
ENSPMEG00000014271	larp4aa	64	54.614	ENSPPYG00000004512	-	98	55.048	Pongo_abelii
ENSPMEG00000014271	larp4aa	77	67.596	ENSPCAG00000003671	LARP4	79	67.596	Procavia_capensis
ENSPMEG00000014271	larp4aa	82	63.807	ENSPCOG00000026291	LARP4	96	63.941	Propithecus_coquereli
ENSPMEG00000014271	larp4aa	90	41.816	ENSPVAG00000016840	LARP4	91	41.427	Pteropus_vampyrus
ENSPMEG00000014271	larp4aa	100	82.051	ENSPNYG00000022265	larp4aa	100	82.051	Pundamilia_nyererei
ENSPMEG00000014271	larp4aa	96	53.741	ENSPNAG00000014478	larp4ab	99	53.701	Pygocentrus_nattereri
ENSPMEG00000014271	larp4aa	97	62.082	ENSPNAG00000024770	larp4aa	99	62.981	Pygocentrus_nattereri
ENSPMEG00000014271	larp4aa	80	55.472	ENSRBIG00000038857	-	89	65.217	Rhinopithecus_bieti
ENSPMEG00000014271	larp4aa	87	55.061	ENSRBIG00000036890	-	99	55.061	Rhinopithecus_bieti
ENSPMEG00000014271	larp4aa	87	55.061	ENSRROG00000025487	-	99	55.061	Rhinopithecus_roxellana
ENSPMEG00000014271	larp4aa	87	61.798	ENSRROG00000042764	-	99	61.798	Rhinopithecus_roxellana
ENSPMEG00000014271	larp4aa	87	60.300	ENSSBOG00000026650	LARP4	99	60.300	Saimiri_boliviensis_boliviensis
ENSPMEG00000014271	larp4aa	100	59.080	ENSSFOG00015014096	larp4ab	100	59.318	Scleropages_formosus
ENSPMEG00000014271	larp4aa	99	60.356	ENSSFOG00015003868	larp4aa	99	61.430	Scleropages_formosus
ENSPMEG00000014271	larp4aa	95	50.318	ENSSMAG00000002838	larp4ab	100	49.375	Scophthalmus_maximus
ENSPMEG00000014271	larp4aa	100	82.699	ENSSMAG00000019473	larp4aa	100	83.681	Scophthalmus_maximus
ENSPMEG00000014271	larp4aa	100	85.644	ENSSDUG00000010621	larp4aa	100	85.153	Seriola_dumerili
ENSPMEG00000014271	larp4aa	95	50.633	ENSSDUG00000006655	larp4ab	100	50.508	Seriola_dumerili
ENSPMEG00000014271	larp4aa	95	50.752	ENSSLDG00000001791	larp4ab	100	50.567	Seriola_lalandi_dorsalis
ENSPMEG00000014271	larp4aa	100	86.012	ENSSLDG00000004942	larp4aa	100	84.908	Seriola_lalandi_dorsalis
ENSPMEG00000014271	larp4aa	63	61.757	ENSSARG00000012469	LARP4	87	52.080	Sorex_araneus
ENSPMEG00000014271	larp4aa	91	47.872	ENSSPUG00000016552	LARP4	93	48.784	Sphenodon_punctatus
ENSPMEG00000014271	larp4aa	95	51.276	ENSSPAG00000002172	larp4ab	100	50.510	Stegastes_partitus
ENSPMEG00000014271	larp4aa	90	91.667	ENSSPAG00000007222	larp4aa	97	88.636	Stegastes_partitus
ENSPMEG00000014271	larp4aa	69	66.769	ENSSSCG00000028516	LARP4	99	48.757	Sus_scrofa
ENSPMEG00000014271	larp4aa	95	50.194	ENSTGUG00000003479	LARP4	99	50.839	Taeniopygia_guttata
ENSPMEG00000014271	larp4aa	95	46.424	ENSTRUG00000007206	larp4ab	100	45.076	Takifugu_rubripes
ENSPMEG00000014271	larp4aa	95	74.835	ENSTNIG00000015109	larp4aa	99	74.639	Tetraodon_nigroviridis
ENSPMEG00000014271	larp4aa	95	46.369	ENSTNIG00000014571	larp4ab	100	46.379	Tetraodon_nigroviridis
ENSPMEG00000014271	larp4aa	80	53.314	ENSTBEG00000005167	LARP4	82	53.936	Tupaia_belangeri
ENSPMEG00000014271	larp4aa	95	48.329	ENSTTRG00000003764	LARP4	99	47.637	Tursiops_truncatus
ENSPMEG00000014271	larp4aa	65	55.910	ENSUAMG00000013764	LARP4	98	55.888	Ursus_americanus
ENSPMEG00000014271	larp4aa	95	49.744	ENSUMAG00000008473	LARP4	99	49.681	Ursus_maritimus
ENSPMEG00000014271	larp4aa	95	48.728	ENSVPAG00000010136	LARP4	99	48.477	Vicugna_pacos
ENSPMEG00000014271	larp4aa	88	59.649	ENSVVUG00000024717	LARP4	99	59.649	Vulpes_vulpes
ENSPMEG00000014271	larp4aa	87	52.137	ENSXETG00000007283	larp4	95	50.211	Xenopus_tropicalis
ENSPMEG00000014271	larp4aa	100	91.771	ENSXCOG00000006387	larp4aa	100	91.771	Xiphophorus_couchianus
ENSPMEG00000014271	larp4aa	95	48.846	ENSXMAG00000002156	larp4ab	99	47.389	Xiphophorus_maculatus
ENSPMEG00000014271	larp4aa	100	97.382	ENSXMAG00000010519	larp4aa	100	97.382	Xiphophorus_maculatus