EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000014312 (Gene tree)
Gene ID: 106913094
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 859 bases
Position: chrLMXC01038083.1:1918-2776
Accession: 106913094
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000028923	RRM_1	PF00076.22	1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000031682	-	375	XM_014979841	ENSPMEP00000028923	124 (aa)	XP_014835327	UPI00072EE34D

Gene Model

Click here to download ENSPMEG00000014312's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000014312's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000014312	-	66	45.122	ENSPMEG00000001983	srsf3b	58	47.297
ENSPMEG00000014312	-	98	82.258	ENSPMEG00000002388	-	50	82.258
ENSPMEG00000014312	-	100	100.000	ENSPMEG00000020607	-	100	100.000
ENSPMEG00000014312	-	67	44.578	ENSPMEG00000012960	-	57	47.297

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000014312	-	98	87.805	ENSG00000136450	SRSF1	94	93.443	Homo_sapiens
ENSPMEG00000014312	-	99	98.374	ENSAPOG00000002748	-	50	98.374	Acanthochromis_polyacanthus
ENSPMEG00000014312	-	98	84.298	ENSAPOG00000008542	-	52	83.721	Acanthochromis_polyacanthus
ENSPMEG00000014312	-	99	98.374	ENSACIG00000008091	srsf1a	53	98.374	Amphilophus_citrinellus
ENSPMEG00000014312	-	99	99.187	ENSAOCG00000010671	-	53	99.187	Amphiprion_ocellaris
ENSPMEG00000014312	-	98	83.721	ENSAOCG00000000337	-	52	83.721	Amphiprion_ocellaris
ENSPMEG00000014312	-	98	83.721	ENSAPEG00000023352	-	51	83.721	Amphiprion_percula
ENSPMEG00000014312	-	99	99.187	ENSAPEG00000009915	-	53	99.187	Amphiprion_percula
ENSPMEG00000014312	-	99	99.187	ENSATEG00000022403	-	50	99.187	Anabas_testudineus
ENSPMEG00000014312	-	98	81.148	ENSATEG00000021567	-	51	81.967	Anabas_testudineus
ENSPMEG00000014312	-	98	87.805	ENSANAG00000020583	-	93	91.176	Aotus_nancymaae
ENSPMEG00000014312	-	98	85.156	ENSAMXG00000035996	srsf1a	51	85.156	Astyanax_mexicanus
ENSPMEG00000014312	-	98	87.805	ENSBTAG00000014766	SRSF1	50	89.431	Bos_taurus
ENSPMEG00000014312	-	98	79.675	ENSCJAG00000008111	-	55	79.675	Callithrix_jacchus
ENSPMEG00000014312	-	98	87.805	ENSCJAG00000041713	-	93	91.176	Callithrix_jacchus
ENSPMEG00000014312	-	98	87.805	ENSCHIG00000010787	SRSF1	50	89.431	Capra_hircus
ENSPMEG00000014312	-	98	87.805	ENSTSYG00000013899	-	93	91.176	Carlito_syrichta
ENSPMEG00000014312	-	98	87.805	ENSCPOG00000032681	-	50	89.431	Cavia_porcellus
ENSPMEG00000014312	-	98	87.805	ENSCCAG00000029484	-	93	91.176	Cebus_capucinus
ENSPMEG00000014312	-	98	87.805	ENSCATG00000042294	-	93	91.176	Cercocebus_atys
ENSPMEG00000014312	-	69	90.588	ENSCATG00000005962	-	73	89.535	Cercocebus_atys
ENSPMEG00000014312	-	98	87.805	ENSCLAG00000014707	-	50	89.431	Chinchilla_lanigera
ENSPMEG00000014312	-	98	87.805	ENSCHOG00000001899	SRSF1	50	89.431	Choloepus_hoffmanni
ENSPMEG00000014312	-	98	87.805	ENSCPBG00000009851	-	50	89.431	Chrysemys_picta_bellii
ENSPMEG00000014312	-	98	87.805	ENSCANG00000029726	-	93	91.176	Colobus_angolensis_palliatus
ENSPMEG00000014312	-	98	87.805	ENSCGRG00000005590	Srsf1	50	89.431	Cricetulus_griseus_crigri
ENSPMEG00000014312	-	98	76.978	ENSCSEG00000009973	-	53	76.978	Cynoglossus_semilaevis
ENSPMEG00000014312	-	99	93.496	ENSCSEG00000014272	-	51	93.750	Cynoglossus_semilaevis
ENSPMEG00000014312	-	98	81.600	ENSCVAG00000005458	-	62	81.600	Cyprinodon_variegatus
ENSPMEG00000014312	-	99	100.000	ENSCVAG00000018617	-	50	100.000	Cyprinodon_variegatus
ENSPMEG00000014312	-	98	87.805	ENSDARG00000017843	srsf1b	50	90.244	Danio_rerio
ENSPMEG00000014312	-	98	81.955	ENSDARG00000057691	srsf1a	74	91.860	Danio_rerio
ENSPMEG00000014312	-	98	87.805	ENSDORG00000015082	Srsf1	50	89.431	Dipodomys_ordii
ENSPMEG00000014312	-	98	87.805	ENSECAG00000016654	SRSF1	50	89.431	Equus_caballus
ENSPMEG00000014312	-	98	87.805	ENSFCAG00000002250	-	61	89.431	Felis_catus
ENSPMEG00000014312	-	98	87.805	ENSFDAG00000010646	-	50	89.431	Fukomys_damarensis
ENSPMEG00000014312	-	99	99.187	ENSFHEG00000003174	srsf1a	53	99.187	Fundulus_heteroclitus
ENSPMEG00000014312	-	98	85.950	ENSGMOG00000014787	-	50	85.124	Gadus_morhua
ENSPMEG00000014312	-	98	87.805	ENSGALG00000005525	SRSF1	50	89.431	Gallus_gallus
ENSPMEG00000014312	-	98	87.805	ENSGGOG00000004386	SRSF1	93	91.176	Gorilla_gorilla
ENSPMEG00000014312	-	99	98.374	ENSHBUG00000016788	srsf1a	51	98.374	Haplochromis_burtoni
ENSPMEG00000014312	-	98	87.805	ENSHGLG00100016906	-	50	89.431	Heterocephalus_glaber_male
ENSPMEG00000014312	-	99	86.047	ENSHCOG00000018918	srsf1a	50	89.147	Hippocampus_comes
ENSPMEG00000014312	-	99	82.443	ENSIPUG00000017039	srsf1a	52	84.733	Ictalurus_punctatus
ENSPMEG00000014312	-	98	87.705	ENSIPUG00000008750	srsf1b	50	90.164	Ictalurus_punctatus
ENSPMEG00000014312	-	98	87.805	ENSSTOG00000000243	-	62	89.431	Ictidomys_tridecemlineatus
ENSPMEG00000014312	-	98	81.301	ENSJJAG00000014464	-	93	84.677	Jaculus_jaculus
ENSPMEG00000014312	-	98	87.805	ENSJJAG00000000102	-	50	89.431	Jaculus_jaculus
ENSPMEG00000014312	-	99	97.581	ENSKMAG00000019232	srsf1a	50	97.581	Kryptolebias_marmoratus
ENSPMEG00000014312	-	98	73.810	ENSLBEG00000015294	-	51	75.397	Labrus_bergylta
ENSPMEG00000014312	-	99	98.374	ENSLBEG00000020864	-	53	98.374	Labrus_bergylta
ENSPMEG00000014312	-	98	87.805	ENSLAFG00000025743	SRSF1	50	89.431	Loxodonta_africana
ENSPMEG00000014312	-	98	87.805	ENSMFAG00000040003	-	93	91.176	Macaca_fascicularis
ENSPMEG00000014312	-	98	85.366	ENSMMUG00000003260	-	59	84.553	Macaca_mulatta
ENSPMEG00000014312	-	98	87.805	ENSMMUG00000004725	SRSF1	93	91.176	Macaca_mulatta
ENSPMEG00000014312	-	98	87.805	ENSMNEG00000027680	-	93	91.176	Macaca_nemestrina
ENSPMEG00000014312	-	98	87.805	ENSMLEG00000040509	SRSF1	50	89.431	Mandrillus_leucophaeus
ENSPMEG00000014312	-	98	89.344	ENSMAMG00000019691	-	51	89.344	Mastacembelus_armatus
ENSPMEG00000014312	-	99	99.187	ENSMAMG00000018454	-	50	99.187	Mastacembelus_armatus
ENSPMEG00000014312	-	98	87.805	ENSMAUG00000021845	Srsf1	50	89.431	Mesocricetus_auratus
ENSPMEG00000014312	-	98	87.805	ENSMICG00000013639	-	93	91.176	Microcebus_murinus
ENSPMEG00000014312	-	98	87.805	ENSMOCG00000001996	Srsf1	50	89.431	Microtus_ochrogaster
ENSPMEG00000014312	-	99	97.561	ENSMMOG00000014354	srsf1a	53	97.561	Mola_mola
ENSPMEG00000014312	-	98	87.805	MGP_CAROLIEiJ_G0016943	Srsf1	61	89.431	Mus_caroli
ENSPMEG00000014312	-	98	87.805	ENSMUSG00000018379	Srsf1	61	89.431	Mus_musculus
ENSPMEG00000014312	-	98	87.805	MGP_PahariEiJ_G0018074	Srsf1	50	89.431	Mus_pahari
ENSPMEG00000014312	-	98	87.805	MGP_SPRETEiJ_G0017790	Srsf1	61	89.431	Mus_spretus
ENSPMEG00000014312	-	98	87.805	ENSMPUG00000015369	SRSF1	50	89.431	Mustela_putorius_furo
ENSPMEG00000014312	-	98	87.805	ENSMLUG00000011040	SRSF1	50	89.431	Myotis_lucifugus
ENSPMEG00000014312	-	98	87.805	ENSNGAG00000011395	Srsf1	50	89.431	Nannospalax_galili
ENSPMEG00000014312	-	98	87.805	ENSNLEG00000008088	-	93	91.176	Nomascus_leucogenys
ENSPMEG00000014312	-	97	86.992	ENSMEUG00000002783	-	98	87.097	Notamacropus_eugenii
ENSPMEG00000014312	-	98	87.805	ENSODEG00000011481	-	50	89.431	Octodon_degus
ENSPMEG00000014312	-	98	88.525	ENSONIG00000004860	-	50	88.525	Oreochromis_niloticus
ENSPMEG00000014312	-	99	98.374	ENSONIG00000013160	-	50	98.374	Oreochromis_niloticus
ENSPMEG00000014312	-	99	99.187	ENSORLG00000004580	srsf1a	50	99.187	Oryzias_latipes
ENSPMEG00000014312	-	99	99.187	ENSORLG00020009456	srsf1a	53	99.187	Oryzias_latipes_hni
ENSPMEG00000014312	-	99	99.187	ENSORLG00015014384	srsf1a	53	99.187	Oryzias_latipes_hsok
ENSPMEG00000014312	-	98	87.805	ENSOGAG00000025950	-	50	89.431	Otolemur_garnettii
ENSPMEG00000014312	-	98	87.805	ENSPPAG00000043403	-	93	91.176	Pan_paniscus
ENSPMEG00000014312	-	98	87.805	ENSPPRG00000004238	-	61	89.431	Panthera_pardus
ENSPMEG00000014312	-	98	87.805	ENSPTRG00000049077	SRSF1	93	91.176	Pan_troglodytes
ENSPMEG00000014312	-	98	87.805	ENSPANG00000022305	-	93	91.176	Papio_anubis
ENSPMEG00000014312	-	98	87.705	ENSPKIG00000012857	srsf1b	50	90.164	Paramormyrops_kingsleyae
ENSPMEG00000014312	-	98	89.344	ENSPKIG00000007204	srsf1a	53	89.344	Paramormyrops_kingsleyae
ENSPMEG00000014312	-	98	76.423	ENSPSIG00000009000	-	50	77.600	Pelodiscus_sinensis
ENSPMEG00000014312	-	99	93.846	ENSPMGG00000013112	-	56	93.846	Periophthalmus_magnuspinnatus
ENSPMEG00000014312	-	99	83.740	ENSPMGG00000005467	-	50	82.114	Periophthalmus_magnuspinnatus
ENSPMEG00000014312	-	98	87.805	ENSPEMG00000021416	Srsf1	50	89.431	Peromyscus_maniculatus_bairdii
ENSPMEG00000014312	-	98	87.097	ENSPCIG00000006076	-	50	89.516	Phascolarctos_cinereus
ENSPMEG00000014312	-	98	82.258	ENSPLAG00000008416	srsf1b	50	82.258	Poecilia_latipinna
ENSPMEG00000014312	-	99	100.000	ENSPREG00000009667	srsf1a	50	100.000	Poecilia_reticulata
ENSPMEG00000014312	-	98	87.805	ENSPPYG00000008240	SRSF1	50	89.431	Pongo_abelii
ENSPMEG00000014312	-	98	87.805	ENSPCAG00000005199	SRSF1	50	89.431	Procavia_capensis
ENSPMEG00000014312	-	98	63.492	ENSPCOG00000025736	-	58	65.289	Propithecus_coquereli
ENSPMEG00000014312	-	98	87.805	ENSPCOG00000023654	-	93	91.176	Propithecus_coquereli
ENSPMEG00000014312	-	98	87.805	ENSRNOG00000050323	Srsf1	50	89.431	Rattus_norvegicus
ENSPMEG00000014312	-	98	87.805	ENSRBIG00000034445	-	93	91.176	Rhinopithecus_bieti
ENSPMEG00000014312	-	98	87.805	ENSRROG00000041506	-	93	91.176	Rhinopithecus_roxellana
ENSPMEG00000014312	-	98	87.805	ENSSBOG00000025377	-	93	91.176	Saimiri_boliviensis_boliviensis
ENSPMEG00000014312	-	98	87.097	ENSSHAG00000002552	-	50	89.516	Sarcophilus_harrisii
ENSPMEG00000014312	-	54	77.612	ENSSFOG00015010677	-	59	78.462	Scleropages_formosus
ENSPMEG00000014312	-	66	78.049	ENSSFOG00015001585	-	72	76.623	Scleropages_formosus
ENSPMEG00000014312	-	98	80.769	ENSSMAG00000009719	-	51	80.769	Scophthalmus_maximus
ENSPMEG00000014312	-	99	97.561	ENSSMAG00000007018	-	50	97.561	Scophthalmus_maximus
ENSPMEG00000014312	-	99	78.049	ENSSDUG00000003929	-	55	77.344	Seriola_dumerili
ENSPMEG00000014312	-	99	98.374	ENSSDUG00000011303	-	53	98.374	Seriola_dumerili
ENSPMEG00000014312	-	98	79.508	ENSSLDG00000016895	-	52	82.258	Seriola_lalandi_dorsalis
ENSPMEG00000014312	-	99	98.374	ENSSLDG00000010543	-	50	98.374	Seriola_lalandi_dorsalis
ENSPMEG00000014312	-	98	87.805	ENSSPUG00000000804	-	63	88.710	Sphenodon_punctatus
ENSPMEG00000014312	-	99	98.387	ENSSPAG00000022562	-	50	98.387	Stegastes_partitus
ENSPMEG00000014312	-	98	78.676	ENSSPAG00000014152	-	53	78.676	Stegastes_partitus
ENSPMEG00000014312	-	98	87.805	ENSSSCG00000017626	-	50	89.431	Sus_scrofa
ENSPMEG00000014312	-	99	98.374	ENSTRUG00000003691	srsf1a	50	98.374	Takifugu_rubripes
ENSPMEG00000014312	-	99	98.374	ENSTNIG00000016223	srsf1a	50	98.374	Tetraodon_nigroviridis
ENSPMEG00000014312	-	98	87.805	ENSUAMG00000009858	SRSF1	50	89.431	Ursus_americanus
ENSPMEG00000014312	-	98	87.805	ENSVPAG00000010094	SRSF1	50	89.431	Vicugna_pacos
ENSPMEG00000014312	-	98	85.950	ENSXETG00000008954	srsf1	53	78.873	Xenopus_tropicalis
ENSPMEG00000014312	-	99	100.000	ENSXMAG00000011766	srsf1a	50	100.000	Xiphophorus_maculatus