EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPMEG00000014399 (Gene tree)
Gene ID
106932681
Gene Symbol
pabpc1b
Alias
-
Full Name
polyadenylate-binding protein 1
Gene Type
protein_coding
Species
Poecilia_mexicana
Status
putative
Strand
Minus strand
Length
9048 bases
Position
chrKQ552509.1:201780-210827
Accession
106932681
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMEP00000012195PABPPF00658.185.7e-3211
ENSPMEP00000028936PABPPF00658.181.1e-3111
ENSPMEP00000012195RRM_5PF13893.62.1e-0812
ENSPMEP00000012195RRM_5PF13893.62.1e-0822
ENSPMEP00000028936RRM_5PF13893.63.3e-0711
ENSPMEP00000012195RRM_1PF00076.221.6e-8914
ENSPMEP00000012195RRM_1PF00076.221.6e-8924
ENSPMEP00000012195RRM_1PF00076.221.6e-8934
ENSPMEP00000012195RRM_1PF00076.221.6e-8944
ENSPMEP00000028936RRM_1PF00076.221.2e-8614
ENSPMEP00000028936RRM_1PF00076.221.2e-8624
ENSPMEP00000028936RRM_1PF00076.221.2e-8634
ENSPMEP00000028936RRM_1PF00076.221.2e-8644
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMET00000031695-3795XM_015011489ENSPMEP00000012195634 (aa)XP_014866975UPI00072E7EE8
ENSPMET00000019542-1797-ENSPMEP00000028936598 (aa)--
Gene Model
Click here to download ENSPMEG00000014399's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000014399's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPMEG00000014399pabpc1b5230.508ENSPMEG00000012831-5030.508
ENSPMEG00000014399pabpc1b5936.145ENSPMEG00000015619elavl47836.145
ENSPMEG00000014399pabpc1b5040.323ENSPMEG00000023690celf3b6940.323
ENSPMEG00000014399pabpc1b9869.735ENSPMEG00000007677pabpc1l9969.702
ENSPMEG00000014399pabpc1b5937.349ENSPMEG00000021929ELAVL27937.349
ENSPMEG00000014399pabpc1b10089.969ENSPMEG00000001334pabpc1a10088.871
ENSPMEG00000014399pabpc1b6230.709ENSPMEG00000015689rbms2b5630.709
ENSPMEG00000014399pabpc1b6488.462ENSPMEG00000009185-8888.462
ENSPMEG00000014399pabpc1b9976.312ENSPMEG00000019739pabpc49876.153
ENSPMEG00000014399pabpc1b6130.208ENSPMEG00000018062-7130.208
ENSPMEG00000014399pabpc1b5635.227ENSPMEG00000013036-5836.047
ENSPMEG00000014399pabpc1b5635.227ENSPMEG00000007082-5836.047
ENSPMEG00000014399pabpc1b5137.333ENSPMEG00000018585rbm196237.333
ENSPMEG00000014399pabpc1b5930.035ENSPMEG00000006938tial19035.036
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMEG00000014399pabpc1b5879.082ENSG00000184388PABPC1L2B9879.082Homo_sapiens
ENSPMEG00000014399pabpc1b5879.082ENSG00000186288PABPC1L2A9879.082Homo_sapiens
ENSPMEG00000014399pabpc1b10095.426ENSAPOG00000017776pabpc1b10095.426Acanthochromis_polyacanthus
ENSPMEG00000014399pabpc1b10090.125ENSAPOG00000015105pabpc1a10089.812Acanthochromis_polyacanthus
ENSPMEG00000014399pabpc1b5879.082ENSAMEG00000019441-9879.082Ailuropoda_melanoleuca
ENSPMEG00000014399pabpc1b10089.590ENSACIG00000018366pabpc1b10087.037Amphilophus_citrinellus
ENSPMEG00000014399pabpc1b10089.812ENSACIG00000004685pabpc1a10089.655Amphilophus_citrinellus
ENSPMEG00000014399pabpc1b10089.812ENSAOCG00000011656pabpc1a10088.715Amphiprion_ocellaris
ENSPMEG00000014399pabpc1b10095.268ENSAOCG00000019839pabpc1b10095.268Amphiprion_ocellaris
ENSPMEG00000014399pabpc1b10095.268ENSAPEG00000010435pabpc1b10095.268Amphiprion_percula
ENSPMEG00000014399pabpc1b10089.812ENSAPEG00000006963pabpc1a10088.715Amphiprion_percula
ENSPMEG00000014399pabpc1b10094.340ENSATEG00000012917pabpc1b10094.340Anabas_testudineus
ENSPMEG00000014399pabpc1b10089.812ENSATEG00000024852pabpc1a10089.655Anabas_testudineus
ENSPMEG00000014399pabpc1b5879.082ENSANAG00000019431-9879.082Aotus_nancymaae
ENSPMEG00000014399pabpc1b5879.082ENSANAG00000019429-9879.082Aotus_nancymaae
ENSPMEG00000014399pabpc1b9991.136ENSACLG00000009399pabpc1a10094.231Astatotilapia_calliptera
ENSPMEG00000014399pabpc1b10093.691ENSACLG00000014335pabpc1b10093.691Astatotilapia_calliptera
ENSPMEG00000014399pabpc1b10093.228ENSAMXG00000008599pabpc1b10092.756Astyanax_mexicanus
ENSPMEG00000014399pabpc1b6275.122ENSBTAG00000050902-9878.049Bos_taurus
ENSPMEG00000014399pabpc1b6273.206ENSBTAG00000052491-9876.077Bos_taurus
ENSPMEG00000014399pabpc1b5879.082ENSCJAG00000041326-9879.082Callithrix_jacchus
ENSPMEG00000014399pabpc1b6275.122ENSCAFG00020002052-9878.049Canis_lupus_dingo
ENSPMEG00000014399pabpc1b5879.082ENSCHIG00000006283-9879.082Capra_hircus
ENSPMEG00000014399pabpc1b5879.082ENSCHIG00000011138-9879.082Capra_hircus
ENSPMEG00000014399pabpc1b5879.082ENSTSYG00000001775-9879.082Carlito_syrichta
ENSPMEG00000014399pabpc1b5879.082ENSCPOG00000009525-9879.082Cavia_porcellus
ENSPMEG00000014399pabpc1b5879.082ENSCCAG00000031524-9879.082Cebus_capucinus
ENSPMEG00000014399pabpc1b5879.082ENSCATG00000043125-9879.082Cercocebus_atys
ENSPMEG00000014399pabpc1b5879.082ENSCATG00000042826-9879.082Cercocebus_atys
ENSPMEG00000014399pabpc1b5878.061ENSCLAG00000017412-9878.061Chinchilla_lanigera
ENSPMEG00000014399pabpc1b5878.061ENSCLAG00000017409-9878.061Chinchilla_lanigera
ENSPMEG00000014399pabpc1b5879.082ENSCSAG00000000102-9879.082Chlorocebus_sabaeus
ENSPMEG00000014399pabpc1b5879.558ENSCGRG00001023387-9677.436Cricetulus_griseus_chok1gshd
ENSPMEG00000014399pabpc1b9989.590ENSCSEG00000013324pabpc1a10089.432Cynoglossus_semilaevis
ENSPMEG00000014399pabpc1b10090.694ENSCSEG00000015241-10090.694Cynoglossus_semilaevis
ENSPMEG00000014399pabpc1b10095.906ENSCVAG00000005489pabpc1b10095.906Cyprinodon_variegatus
ENSPMEG00000014399pabpc1b10089.812ENSCVAG00000021872pabpc1a10088.715Cyprinodon_variegatus
ENSPMEG00000014399pabpc1b10090.094ENSDARG00000017219pabpc1a10089.465Danio_rerio
ENSPMEG00000014399pabpc1b10092.598ENSDARG00000021140pabpc1b9993.617Danio_rerio
ENSPMEG00000014399pabpc1b6177.249ENSDNOG00000030926-9877.551Dasypus_novemcinctus
ENSPMEG00000014399pabpc1b6175.000ENSDORG00000011362-9877.551Dipodomys_ordii
ENSPMEG00000014399pabpc1b6274.757ENSEASG00005010399-9877.670Equus_asinus_asinus
ENSPMEG00000014399pabpc1b6274.757ENSECAG00000002620-9877.670Equus_caballus
ENSPMEG00000014399pabpc1b6271.939ENSEEUG00000008203-9874.490Erinaceus_europaeus
ENSPMEG00000014399pabpc1b9990.566ENSELUG00000003614pabpc1a10089.780Esox_lucius
ENSPMEG00000014399pabpc1b6256.897ENSELUG00000005389-9759.052Esox_lucius
ENSPMEG00000014399pabpc1b10091.366ENSELUG00000015062-10091.366Esox_lucius
ENSPMEG00000014399pabpc1b5879.082ENSFCAG00000039701-9879.082Felis_catus
ENSPMEG00000014399pabpc1b5879.082ENSFDAG00000005484-9879.082Fukomys_damarensis
ENSPMEG00000014399pabpc1b10097.003ENSFHEG00000008186pabpc1b10097.003Fundulus_heteroclitus
ENSPMEG00000014399pabpc1b10089.655ENSFHEG00000018979pabpc1a10089.498Fundulus_heteroclitus
ENSPMEG00000014399pabpc1b9987.869ENSGMOG00000013448pabpc1a9987.869Gadus_morhua
ENSPMEG00000014399pabpc1b10083.178ENSGMOG00000002448-10082.555Gadus_morhua
ENSPMEG00000014399pabpc1b10099.054ENSGAFG00000010193pabpc1b10099.054Gambusia_affinis
ENSPMEG00000014399pabpc1b10089.342ENSGAFG00000019750pabpc1a10088.401Gambusia_affinis
ENSPMEG00000014399pabpc1b10089.969ENSGACG00000003572pabpc1a10089.812Gasterosteus_aculeatus
ENSPMEG00000014399pabpc1b10091.719ENSGACG00000003771pabpc1b10091.719Gasterosteus_aculeatus
ENSPMEG00000014399pabpc1b5879.082ENSGGOG00000038606-9879.082Gorilla_gorilla
ENSPMEG00000014399pabpc1b5879.082ENSGGOG00000043933-9879.082Gorilla_gorilla
ENSPMEG00000014399pabpc1b9991.136ENSHBUG00000020487pabpc1a10094.231Haplochromis_burtoni
ENSPMEG00000014399pabpc1b10093.691ENSHBUG00000002075pabpc1b10093.691Haplochromis_burtoni
ENSPMEG00000014399pabpc1b5879.082ENSHGLG00000019762-9879.082Heterocephalus_glaber_female
ENSPMEG00000014399pabpc1b5879.082ENSHGLG00000019668-9879.082Heterocephalus_glaber_female
ENSPMEG00000014399pabpc1b5879.082ENSHGLG00100020854-9879.082Heterocephalus_glaber_male
ENSPMEG00000014399pabpc1b10089.655ENSHCOG00000013502pabpc1a10089.498Hippocampus_comes
ENSPMEG00000014399pabpc1b9876.368ENSHCOG00000003175pabpc1b9981.915Hippocampus_comes
ENSPMEG00000014399pabpc1b10088.504ENSIPUG00000008848pabpc1a10088.346Ictalurus_punctatus
ENSPMEG00000014399pabpc1b10087.086ENSIPUG00000010791-10087.086Ictalurus_punctatus
ENSPMEG00000014399pabpc1b7455.532ENSIPUG00000021244-6555.532Ictalurus_punctatus
ENSPMEG00000014399pabpc1b7453.731ENSIPUG00000018724-7653.731Ictalurus_punctatus
ENSPMEG00000014399pabpc1b5879.592ENSSTOG00000022096-9879.592Ictidomys_tridecemlineatus
ENSPMEG00000014399pabpc1b5879.592ENSSTOG00000026028-9879.592Ictidomys_tridecemlineatus
ENSPMEG00000014399pabpc1b5878.571ENSJJAG00000007037-9878.571Jaculus_jaculus
ENSPMEG00000014399pabpc1b10089.812ENSKMAG00000000605pabpc1a10089.655Kryptolebias_marmoratus
ENSPMEG00000014399pabpc1b10094.006ENSKMAG00000008049pabpc1b10093.533Kryptolebias_marmoratus
ENSPMEG00000014399pabpc1b10089.498ENSLBEG00000024002-10089.342Labrus_bergylta
ENSPMEG00000014399pabpc1b10093.849ENSLBEG00000026845pabpc1b10093.849Labrus_bergylta
ENSPMEG00000014399pabpc1b5878.462ENSLAFG00000023096-9878.462Loxodonta_africana
ENSPMEG00000014399pabpc1b5878.680ENSMFAG00000028878-9878.680Macaca_fascicularis
ENSPMEG00000014399pabpc1b5879.082ENSMMUG00000039929-9879.082Macaca_mulatta
ENSPMEG00000014399pabpc1b5879.082ENSMMUG00000037681-9879.082Macaca_mulatta
ENSPMEG00000014399pabpc1b5879.082ENSMMUG00000009740-9879.082Macaca_mulatta
ENSPMEG00000014399pabpc1b5879.082ENSMNEG00000037732-9879.082Macaca_nemestrina
ENSPMEG00000014399pabpc1b5879.082ENSMLEG00000027495-9879.082Mandrillus_leucophaeus
ENSPMEG00000014399pabpc1b10095.268ENSMAMG00000014610pabpc1b10095.268Mastacembelus_armatus
ENSPMEG00000014399pabpc1b10089.498ENSMAMG00000004502-10089.342Mastacembelus_armatus
ENSPMEG00000014399pabpc1b9991.136ENSMZEG00005025416pabpc1a10094.231Maylandia_zebra
ENSPMEG00000014399pabpc1b10093.691ENSMZEG00005026745pabpc1b10093.691Maylandia_zebra
ENSPMEG00000014399pabpc1b5879.082ENSMICG00000047642-9879.082Microcebus_murinus
ENSPMEG00000014399pabpc1b10087.855ENSMMOG00000018009pabpc1b10087.697Mola_mola
ENSPMEG00000014399pabpc1b9989.773ENSMMOG00000018044pabpc1a10094.231Mola_mola
ENSPMEG00000014399pabpc1b9866.986ENSMODG00000015024-9966.137Monodelphis_domestica
ENSPMEG00000014399pabpc1b9873.089ENSMODG00000013156-9873.280Monodelphis_domestica
ENSPMEG00000014399pabpc1b10088.871ENSMALG00000013020-10088.871Monopterus_albus
ENSPMEG00000014399pabpc1b10089.117ENSMALG00000006066pabpc1b10089.274Monopterus_albus
ENSPMEG00000014399pabpc1b5881.421ENSNGAG00000012688-9878.571Nannospalax_galili
ENSPMEG00000014399pabpc1b10093.691ENSNBRG00000013737pabpc1b10093.691Neolamprologus_brichardi
ENSPMEG00000014399pabpc1b9991.136ENSNBRG00000003068-10094.231Neolamprologus_brichardi
ENSPMEG00000014399pabpc1b5879.082ENSNLEG00000018128-9879.082Nomascus_leucogenys
ENSPMEG00000014399pabpc1b5878.571ENSODEG00000018540-9878.571Octodon_degus
ENSPMEG00000014399pabpc1b10089.655ENSONIG00000006871-10089.342Oreochromis_niloticus
ENSPMEG00000014399pabpc1b10093.375ENSONIG00000002717pabpc1b10093.375Oreochromis_niloticus
ENSPMEG00000014399pabpc1b5879.082ENSOCUG00000002565-9879.082Oryctolagus_cuniculus
ENSPMEG00000014399pabpc1b9993.349ENSORLG00000002691pabpc1a9693.349Oryzias_latipes
ENSPMEG00000014399pabpc1b10086.435ENSORLG00000003008-10085.647Oryzias_latipes
ENSPMEG00000014399pabpc1b10089.655ENSORLG00020022398pabpc1a10089.498Oryzias_latipes_hni
ENSPMEG00000014399pabpc1b10086.435ENSORLG00020022259-10085.647Oryzias_latipes_hni
ENSPMEG00000014399pabpc1b10089.498ENSORLG00015013633pabpc110089.342Oryzias_latipes_hsok
ENSPMEG00000014399pabpc1b10086.751ENSORLG00015010932-10085.962Oryzias_latipes_hsok
ENSPMEG00000014399pabpc1b9984.897ENSOMEG00000013627pabpc1b10084.897Oryzias_melastigma
ENSPMEG00000014399pabpc1b10089.969ENSOMEG00000020219pabpc1a10089.812Oryzias_melastigma
ENSPMEG00000014399pabpc1b5879.082ENSOGAG00000029513-9879.082Otolemur_garnettii
ENSPMEG00000014399pabpc1b5879.082ENSOGAG00000026047-9879.082Otolemur_garnettii
ENSPMEG00000014399pabpc1b5879.082ENSOARG00000005943-9879.082Ovis_aries
ENSPMEG00000014399pabpc1b5879.082ENSPPAG00000012920-9879.082Pan_paniscus
ENSPMEG00000014399pabpc1b5879.082ENSPPRG00000011809-9879.082Panthera_pardus
ENSPMEG00000014399pabpc1b5879.082ENSPPRG00000011804-9879.082Panthera_pardus
ENSPMEG00000014399pabpc1b5879.082ENSPTRG00000028252-9879.082Pan_troglodytes
ENSPMEG00000014399pabpc1b5879.082ENSPANG00000011549-9879.082Papio_anubis
ENSPMEG00000014399pabpc1b10093.543ENSPKIG00000005676pabpc1b10093.228Paramormyrops_kingsleyae
ENSPMEG00000014399pabpc1b7591.410ENSPMGG00000023134-9794.395Periophthalmus_magnuspinnatus
ENSPMEG00000014399pabpc1b7785.954ENSPMGG00000022487pabpc1a9292.601Periophthalmus_magnuspinnatus
ENSPMEG00000014399pabpc1b9971.383ENSPCIG00000016995-5470.880Phascolarctos_cinereus
ENSPMEG00000014399pabpc1b10088.462ENSPFOG00000010815pabpc1a10088.290Poecilia_formosa
ENSPMEG00000014399pabpc1b10099.685ENSPFOG00000005917pabpc1b10099.685Poecilia_formosa
ENSPMEG00000014399pabpc1b10099.685ENSPLAG00000001388pabpc1b10099.685Poecilia_latipinna
ENSPMEG00000014399pabpc1b10089.969ENSPLAG00000004114pabpc1a10088.871Poecilia_latipinna
ENSPMEG00000014399pabpc1b10099.685ENSPREG00000010911pabpc1b10099.685Poecilia_reticulata
ENSPMEG00000014399pabpc1b9990.682ENSPREG00000019595pabpc1a10094.231Poecilia_reticulata
ENSPMEG00000014399pabpc1b5879.082ENSPPYG00000020468-9879.082Pongo_abelii
ENSPMEG00000014399pabpc1b5979.082ENSPCAG00000005308-9879.082Procavia_capensis
ENSPMEG00000014399pabpc1b5879.592ENSPCOG00000026349-9879.592Propithecus_coquereli
ENSPMEG00000014399pabpc1b5979.487ENSPVAG00000016117-9879.487Pteropus_vampyrus
ENSPMEG00000014399pabpc1b10089.655ENSPNYG00000005192pabpc1a10089.498Pundamilia_nyererei
ENSPMEG00000014399pabpc1b10093.691ENSPNYG00000012578pabpc1b10093.691Pundamilia_nyererei
ENSPMEG00000014399pabpc1b10089.623ENSPNAG00000028408pabpc1a10088.994Pygocentrus_nattereri
ENSPMEG00000014399pabpc1b10093.228ENSPNAG00000024626pabpc1b10092.756Pygocentrus_nattereri
ENSPMEG00000014399pabpc1b5879.082ENSRBIG00000027173-9879.082Rhinopithecus_bieti
ENSPMEG00000014399pabpc1b9990.780ENSRBIG00000028738-9590.780Rhinopithecus_bieti
ENSPMEG00000014399pabpc1b5879.082ENSRROG00000017404-9879.082Rhinopithecus_roxellana
ENSPMEG00000014399pabpc1b9863.666ENSSHAG00000000511-10063.344Sarcophilus_harrisii
ENSPMEG00000014399pabpc1b7079.191ENSSFOG00015019668-9179.191Scleropages_formosus
ENSPMEG00000014399pabpc1b10090.709ENSSFOG00015006662pabpc1a10090.709Scleropages_formosus
ENSPMEG00000014399pabpc1b10092.902ENSSFOG00015002752-10092.902Scleropages_formosus
ENSPMEG00000014399pabpc1b10089.655ENSSMAG00000010803pabpc1a10089.498Scophthalmus_maximus
ENSPMEG00000014399pabpc1b10094.164ENSSMAG00000006869pabpc1b10094.164Scophthalmus_maximus
ENSPMEG00000014399pabpc1b10089.655ENSSDUG00000006675pabpc1a10089.498Seriola_dumerili
ENSPMEG00000014399pabpc1b10093.218ENSSDUG00000011965pabpc1b10093.218Seriola_dumerili
ENSPMEG00000014399pabpc1b10089.655ENSSLDG00000011661pabpc1a10089.498Seriola_lalandi_dorsalis
ENSPMEG00000014399pabpc1b10094.836ENSSLDG00000014156pabpc1b10094.836Seriola_lalandi_dorsalis
ENSPMEG00000014399pabpc1b10095.741ENSSPAG00000019265pabpc1b10095.741Stegastes_partitus
ENSPMEG00000014399pabpc1b10089.969ENSSPAG00000014453-10089.812Stegastes_partitus
ENSPMEG00000014399pabpc1b5879.082ENSSSCG00000032167-9879.082Sus_scrofa
ENSPMEG00000014399pabpc1b5879.082ENSSSCG00000036336-9879.082Sus_scrofa
ENSPMEG00000014399pabpc1b10089.028ENSTRUG00000011577-10089.028Takifugu_rubripes
ENSPMEG00000014399pabpc1b10090.866ENSTRUG00000003767-10090.236Takifugu_rubripes
ENSPMEG00000014399pabpc1b10090.909ENSTNIG00000009153pabpc1b10090.439Tetraodon_nigroviridis
ENSPMEG00000014399pabpc1b10086.090ENSTNIG00000013307pabpc1a10086.090Tetraodon_nigroviridis
ENSPMEG00000014399pabpc1b5879.082ENSTTRG00000013181-9879.082Tursiops_truncatus
ENSPMEG00000014399pabpc1b5879.082ENSUAMG00000008089-9879.082Ursus_americanus
ENSPMEG00000014399pabpc1b5879.082ENSUMAG00000003364-9879.082Ursus_maritimus
ENSPMEG00000014399pabpc1b9753.809ENSUMAG00000023926-8968.232Ursus_maritimus
ENSPMEG00000014399pabpc1b5978.000ENSVVUG00000015892-9778.000Vulpes_vulpes
ENSPMEG00000014399pabpc1b9945.946ENSXETG00000015439-10045.270Xenopus_tropicalis
ENSPMEG00000014399pabpc1b10086.278ENSXCOG00000017066pabpc1a10086.435Xiphophorus_couchianus
ENSPMEG00000014399pabpc1b10092.271ENSXCOG00000019901pabpc1b10091.956Xiphophorus_couchianus
ENSPMEG00000014399pabpc1b10089.812ENSXMAG00000002555pabpc1a10089.655Xiphophorus_maculatus
ENSPMEG00000014399pabpc1b10099.211ENSXMAG00000003753pabpc1b10099.211Xiphophorus_maculatus

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