EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000014605 (Gene tree)
Gene ID: 106917532
Gene Symbol: si:dkey-93h22.8
Alias: -
Full Name: peroxisome proliferator-activated receptor gamma%2C coactivator-related 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 9249 bases
Position: chrKQ551241.1:277693-286941
Accession: 106917532
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000029090	RRM_1	PF00076.22	4.7e-10	1	1
ENSPMEP00000012432	RRM_1	PF00076.22	4.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000019864	-	4004	XM_014986562	ENSPMEP00000012432	1033 (aa)	XP_014842048	UPI00072DE1B8
ENSPMET00000019833	-	3929	-	ENSPMEP00000029090	1008 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000014605's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000014605's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000014605	si:dkey-93h22.8	84	86.928	ENSAPOG00000001094	si:dkey-93h22.8	84	85.443	Acanthochromis_polyacanthus
ENSPMEG00000014605	si:dkey-93h22.8	76	40.471	ENSAOCG00000008140	si:dkey-93h22.8	77	40.471	Amphiprion_ocellaris
ENSPMEG00000014605	si:dkey-93h22.8	76	39.722	ENSAPEG00000014568	si:dkey-93h22.8	77	40.257	Amphiprion_percula
ENSPMEG00000014605	si:dkey-93h22.8	86	82.803	ENSACLG00000019359	-	55	82.911	Astatotilapia_calliptera
ENSPMEG00000014605	si:dkey-93h22.8	73	84.820	ENSGAFG00000011120	si:dkey-93h22.8	98	87.275	Gambusia_affinis
ENSPMEG00000014605	si:dkey-93h22.8	59	82.803	ENSHBUG00000019347	-	55	82.911	Haplochromis_burtoni
ENSPMEG00000014605	si:dkey-93h22.8	74	45.124	ENSHCOG00000015325	-	50	83.206	Hippocampus_comes
ENSPMEG00000014605	si:dkey-93h22.8	66	60.645	ENSIPUG00000021651	si:dkey-93h22.8	68	69.531	Ictalurus_punctatus
ENSPMEG00000014605	si:dkey-93h22.8	59	82.051	ENSLBEG00000024075	-	56	81.646	Labrus_bergylta
ENSPMEG00000014605	si:dkey-93h22.8	63	83.974	ENSMAMG00000011169	-	59	83.544	Mastacembelus_armatus
ENSPMEG00000014605	si:dkey-93h22.8	86	82.803	ENSMZEG00005008228	-	57	82.911	Maylandia_zebra
ENSPMEG00000014605	si:dkey-93h22.8	58	80.128	ENSMALG00000005052	-	54	78.481	Monopterus_albus
ENSPMEG00000014605	si:dkey-93h22.8	100	99.226	ENSPFOG00000001320	si:dkey-93h22.8	100	99.226	Poecilia_formosa
ENSPMEG00000014605	si:dkey-93h22.8	100	95.837	ENSPLAG00000001769	si:dkey-93h22.8	100	95.837	Poecilia_latipinna
ENSPMEG00000014605	si:dkey-93h22.8	100	91.548	ENSPREG00000000446	si:dkey-93h22.8	100	91.548	Poecilia_reticulata
ENSPMEG00000014605	si:dkey-93h22.8	86	82.911	ENSPNYG00000002682	-	57	82.911	Pundamilia_nyererei
ENSPMEG00000014605	si:dkey-93h22.8	58	79.739	ENSSMAG00000005915	si:dkey-93h22.8	55	78.481	Scophthalmus_maximus
ENSPMEG00000014605	si:dkey-93h22.8	76	39.545	ENSSDUG00000001268	si:dkey-93h22.8	91	82.911	Seriola_dumerili
ENSPMEG00000014605	si:dkey-93h22.8	91	83.333	ENSSLDG00000012010	si:dkey-93h22.8	91	82.911	Seriola_lalandi_dorsalis
ENSPMEG00000014605	si:dkey-93h22.8	74	40.176	ENSSPAG00000010602	si:dkey-93h22.8	90	81.013	Stegastes_partitus
ENSPMEG00000014605	si:dkey-93h22.8	76	87.268	ENSXMAG00000000243	si:dkey-93h22.8	100	89.469	Xiphophorus_maculatus