EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000014864 (Gene tree)
Gene ID: 106910158
Gene Symbol: rbm17
Alias: -
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 11372 bases
Position: chrKQ551072.1:666084-677455
Accession: 106910158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000012640	RRM_1	PF00076.22	3.5e-05	1	1
ENSPMEP00000012648	RRM_1	PF00076.22	3.5e-05	1	1
ENSPMEP00000012663	RRM_1	PF00076.22	3.8e-05	1	1
ENSPMEP00000012655	RRM_1	PF00076.22	4.1e-05	1	1
ENSPMEP00000012648	G-patch	PF01585.23	4.6e-13	1	1
ENSPMEP00000012640	G-patch	PF01585.23	4.6e-13	1	1
ENSPMEP00000012663	G-patch	PF01585.23	4.6e-13	1	1
ENSPMEP00000012655	G-patch	PF01585.23	5.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000020134	-	2250	-	ENSPMEP00000012655	444 (aa)	-	-
ENSPMET00000020179	-	1212	-	ENSPMEP00000012640	403 (aa)	-	-
ENSPMET00000020129	-	1728	XM_014976755	ENSPMEP00000012648	404 (aa)	XP_014832241	UPI00072DE56E
ENSPMET00000020141	-	2108	XM_014976743	ENSPMEP00000012663	421 (aa)	XP_014832229	UPI0004446010

Gene Model

Click here to download ENSPMEG00000014864's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000014864's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000014864	rbm17	100	81.818	ENSG00000134453	RBM17	100	81.818	Homo_sapiens
ENSPMEG00000014864	rbm17	99	93.750	ENSAPOG00000007101	rbm17	99	93.750	Acanthochromis_polyacanthus
ENSPMEG00000014864	rbm17	100	82.064	ENSAMEG00000002107	RBM17	100	81.327	Ailuropoda_melanoleuca
ENSPMEG00000014864	rbm17	100	90.370	ENSACIG00000006251	rbm17	100	90.370	Amphilophus_citrinellus
ENSPMEG00000014864	rbm17	100	93.564	ENSAOCG00000014892	rbm17	100	93.564	Amphiprion_ocellaris
ENSPMEG00000014864	rbm17	100	93.564	ENSAPEG00000022779	rbm17	100	93.564	Amphiprion_percula
ENSPMEG00000014864	rbm17	100	92.162	ENSATEG00000004406	rbm17	100	92.162	Anabas_testudineus
ENSPMEG00000014864	rbm17	100	81.572	ENSAPLG00000004190	RBM17	100	81.572	Anas_platyrhynchos
ENSPMEG00000014864	rbm17	89	78.723	ENSACAG00000005418	RBM17	99	78.723	Anolis_carolinensis
ENSPMEG00000014864	rbm17	100	82.310	ENSANAG00000030127	RBM17	97	88.333	Aotus_nancymaae
ENSPMEG00000014864	rbm17	100	70.588	ENSANAG00000019330	-	95	86.207	Aotus_nancymaae
ENSPMEG00000014864	rbm17	100	89.330	ENSACLG00000003928	rbm17	100	89.330	Astatotilapia_calliptera
ENSPMEG00000014864	rbm17	100	85.106	ENSAMXG00000005853	rbm17	100	85.106	Astyanax_mexicanus
ENSPMEG00000014864	rbm17	100	81.572	ENSBTAG00000021951	RBM17	100	80.835	Bos_taurus
ENSPMEG00000014864	rbm17	100	80.344	ENSBTAG00000011094	-	100	79.607	Bos_taurus
ENSPMEG00000014864	rbm17	74	35.099	WBGene00010233	F58B3.7	91	32.821	Caenorhabditis_elegans
ENSPMEG00000014864	rbm17	100	82.310	ENSCJAG00000020573	RBM17	100	82.310	Callithrix_jacchus
ENSPMEG00000014864	rbm17	100	82.064	ENSCAFG00000005206	RBM17	100	81.327	Canis_familiaris
ENSPMEG00000014864	rbm17	100	79.012	ENSCAFG00020005420	RBM17	100	78.272	Canis_lupus_dingo
ENSPMEG00000014864	rbm17	100	81.572	ENSCHIG00000023204	-	100	80.835	Capra_hircus
ENSPMEG00000014864	rbm17	100	79.361	ENSCHIG00000019921	-	100	78.624	Capra_hircus
ENSPMEG00000014864	rbm17	100	81.463	ENSTSYG00000001165	RBM17	99	88.983	Carlito_syrichta
ENSPMEG00000014864	rbm17	96	62.148	ENSCAPG00000006275	RBM17	100	66.938	Cavia_aperea
ENSPMEG00000014864	rbm17	100	79.024	ENSCPOG00000005679	RBM17	100	78.293	Cavia_porcellus
ENSPMEG00000014864	rbm17	100	82.310	ENSCCAG00000018655	RBM17	97	88.333	Cebus_capucinus
ENSPMEG00000014864	rbm17	100	81.818	ENSCATG00000041566	RBM17	97	88.333	Cercocebus_atys
ENSPMEG00000014864	rbm17	100	81.220	ENSCLAG00000012195	RBM17	99	80.488	Chinchilla_lanigera
ENSPMEG00000014864	rbm17	100	81.818	ENSCSAG00000013564	RBM17	100	81.818	Chlorocebus_sabaeus
ENSPMEG00000014864	rbm17	92	64.894	ENSCHOG00000005131	RBM17	100	64.096	Choloepus_hoffmanni
ENSPMEG00000014864	rbm17	100	82.310	ENSCPBG00000019836	RBM17	100	82.310	Chrysemys_picta_bellii
ENSPMEG00000014864	rbm17	100	46.265	ENSCSAVG00000008782	-	100	43.855	Ciona_savignyi
ENSPMEG00000014864	rbm17	100	81.572	ENSCANG00000030987	RBM17	97	88.333	Colobus_angolensis_palliatus
ENSPMEG00000014864	rbm17	98	73.604	ENSCANG00000023715	-	99	72.843	Colobus_angolensis_palliatus
ENSPMEG00000014864	rbm17	100	65.356	ENSCGRG00001009256	-	100	61.916	Cricetulus_griseus_chok1gshd
ENSPMEG00000014864	rbm17	100	81.463	ENSCGRG00001013842	Rbm17	100	80.732	Cricetulus_griseus_chok1gshd
ENSPMEG00000014864	rbm17	100	81.463	ENSCGRG00000006907	Rbm17	100	80.732	Cricetulus_griseus_crigri
ENSPMEG00000014864	rbm17	100	87.407	ENSCSEG00000018164	rbm17	100	87.407	Cynoglossus_semilaevis
ENSPMEG00000014864	rbm17	100	89.330	ENSCVAG00000002476	rbm17	100	89.330	Cyprinodon_variegatus
ENSPMEG00000014864	rbm17	100	76.706	ENSDARG00000031346	rbm17	100	79.529	Danio_rerio
ENSPMEG00000014864	rbm17	100	81.818	ENSDNOG00000035920	RBM17	100	81.081	Dasypus_novemcinctus
ENSPMEG00000014864	rbm17	99	38.022	FBgn0086683	Spf45	99	37.363	Drosophila_melanogaster
ENSPMEG00000014864	rbm17	100	63.951	ENSETEG00000006642	RBM17	85	83.178	Echinops_telfairi
ENSPMEG00000014864	rbm17	63	69.048	ENSEBUG00000010253	rbm17	84	69.048	Eptatretus_burgeri
ENSPMEG00000014864	rbm17	92	79.255	ENSEASG00005009236	-	100	79.255	Equus_asinus_asinus
ENSPMEG00000014864	rbm17	100	76.528	ENSEASG00005019205	-	100	77.017	Equus_asinus_asinus
ENSPMEG00000014864	rbm17	100	72.482	ENSECAG00000001379	-	100	72.482	Equus_caballus
ENSPMEG00000014864	rbm17	100	69.802	ENSECAG00000008939	RBM17	100	70.792	Equus_caballus
ENSPMEG00000014864	rbm17	86	64.286	ENSEEUG00000013077	RBM17	100	63.429	Erinaceus_europaeus
ENSPMEG00000014864	rbm17	100	85.315	ENSELUG00000006440	rbm17	100	85.315	Esox_lucius
ENSPMEG00000014864	rbm17	100	82.064	ENSFCAG00000031988	RBM17	100	81.327	Felis_catus
ENSPMEG00000014864	rbm17	100	81.081	ENSFALG00000001790	RBM17	100	81.081	Ficedula_albicollis
ENSPMEG00000014864	rbm17	100	81.220	ENSFDAG00000007470	RBM17	100	81.220	Fukomys_damarensis
ENSPMEG00000014864	rbm17	100	95.249	ENSFHEG00000001266	rbm17	100	93.692	Fundulus_heteroclitus
ENSPMEG00000014864	rbm17	99	80.383	ENSGMOG00000008438	rbm17	100	79.187	Gadus_morhua
ENSPMEG00000014864	rbm17	100	81.818	ENSGALG00000006332	RBM17	100	81.818	Gallus_gallus
ENSPMEG00000014864	rbm17	100	97.525	ENSGAFG00000019879	rbm17	100	97.525	Gambusia_affinis
ENSPMEG00000014864	rbm17	99	89.826	ENSGACG00000019174	rbm17	99	89.826	Gasterosteus_aculeatus
ENSPMEG00000014864	rbm17	100	82.310	ENSGAGG00000019906	RBM17	100	82.310	Gopherus_agassizii
ENSPMEG00000014864	rbm17	100	92.574	ENSHBUG00000016624	rbm17	100	92.574	Haplochromis_burtoni
ENSPMEG00000014864	rbm17	100	81.220	ENSHGLG00000011580	RBM17	100	81.220	Heterocephalus_glaber_female
ENSPMEG00000014864	rbm17	100	81.220	ENSHGLG00100010460	RBM17	100	81.220	Heterocephalus_glaber_male
ENSPMEG00000014864	rbm17	100	66.585	ENSHGLG00100010556	-	100	62.899	Heterocephalus_glaber_male
ENSPMEG00000014864	rbm17	99	88.067	ENSHCOG00000010865	rbm17	100	88.067	Hippocampus_comes
ENSPMEG00000014864	rbm17	100	81.455	ENSIPUG00000007699	Rbm17	100	80.751	Ictalurus_punctatus
ENSPMEG00000014864	rbm17	100	81.463	ENSSTOG00000013591	RBM17	100	81.463	Ictidomys_tridecemlineatus
ENSPMEG00000014864	rbm17	100	59.951	ENSJJAG00000000993	-	100	59.459	Jaculus_jaculus
ENSPMEG00000014864	rbm17	100	81.463	ENSJJAG00000022886	Rbm17	100	80.732	Jaculus_jaculus
ENSPMEG00000014864	rbm17	100	92.399	ENSKMAG00000021400	rbm17	100	92.399	Kryptolebias_marmoratus
ENSPMEG00000014864	rbm17	100	91.337	ENSLBEG00000000881	rbm17	100	90.261	Labrus_bergylta
ENSPMEG00000014864	rbm17	99	65.728	ENSLACG00000017297	RBM17	99	66.432	Latimeria_chalumnae
ENSPMEG00000014864	rbm17	100	84.314	ENSLOCG00000015659	rbm17	100	83.333	Lepisosteus_oculatus
ENSPMEG00000014864	rbm17	100	80.825	ENSLAFG00000011629	RBM17	100	80.097	Loxodonta_africana
ENSPMEG00000014864	rbm17	100	81.818	ENSMFAG00000035521	RBM17	97	88.333	Macaca_fascicularis
ENSPMEG00000014864	rbm17	100	81.818	ENSMMUG00000015152	RBM17	97	88.333	Macaca_mulatta
ENSPMEG00000014864	rbm17	100	81.818	ENSMNEG00000017264	RBM17	97	88.333	Macaca_nemestrina
ENSPMEG00000014864	rbm17	100	81.818	ENSMLEG00000029340	RBM17	97	88.333	Mandrillus_leucophaeus
ENSPMEG00000014864	rbm17	100	91.211	ENSMAMG00000000387	rbm17	100	91.211	Mastacembelus_armatus
ENSPMEG00000014864	rbm17	100	91.686	ENSMZEG00005015179	rbm17	100	91.686	Maylandia_zebra
ENSPMEG00000014864	rbm17	100	80.630	ENSMGAG00000003981	RBM17	100	80.630	Meleagris_gallopavo
ENSPMEG00000014864	rbm17	100	81.463	ENSMAUG00000019247	Rbm17	100	80.732	Mesocricetus_auratus
ENSPMEG00000014864	rbm17	100	81.463	ENSMICG00000003976	-	100	81.463	Microcebus_murinus
ENSPMEG00000014864	rbm17	100	75.604	ENSMICG00000041489	-	100	75.604	Microcebus_murinus
ENSPMEG00000014864	rbm17	100	81.463	ENSMOCG00000011847	Rbm17	100	80.732	Microtus_ochrogaster
ENSPMEG00000014864	rbm17	93	65.000	ENSMOCG00000014517	-	99	65.000	Microtus_ochrogaster
ENSPMEG00000014864	rbm17	100	84.108	ENSMMOG00000010264	rbm17	100	84.108	Mola_mola
ENSPMEG00000014864	rbm17	100	82.064	ENSMODG00000016648	RBM17	100	82.064	Monodelphis_domestica
ENSPMEG00000014864	rbm17	100	90.284	ENSMALG00000010597	rbm17	100	91.469	Monopterus_albus
ENSPMEG00000014864	rbm17	100	81.463	MGP_CAROLIEiJ_G0023173	Rbm17	100	81.463	Mus_caroli
ENSPMEG00000014864	rbm17	100	81.463	ENSMUSG00000037197	Rbm17	100	81.463	Mus_musculus
ENSPMEG00000014864	rbm17	100	81.707	MGP_PahariEiJ_G0019233	Rbm17	100	81.707	Mus_pahari
ENSPMEG00000014864	rbm17	100	81.463	MGP_SPRETEiJ_G0024091	Rbm17	100	81.463	Mus_spretus
ENSPMEG00000014864	rbm17	86	80.000	ENSMPUG00000016359	RBM17	96	79.143	Mustela_putorius_furo
ENSPMEG00000014864	rbm17	100	79.562	ENSMLUG00000002302	-	100	78.832	Myotis_lucifugus
ENSPMEG00000014864	rbm17	100	77.396	ENSMLUG00000025709	-	100	76.904	Myotis_lucifugus
ENSPMEG00000014864	rbm17	100	81.463	ENSNGAG00000000741	Rbm17	100	80.732	Nannospalax_galili
ENSPMEG00000014864	rbm17	100	57.985	ENSNGAG00000000663	-	100	57.740	Nannospalax_galili
ENSPMEG00000014864	rbm17	100	86.352	ENSNBRG00000018148	rbm17	100	86.352	Neolamprologus_brichardi
ENSPMEG00000014864	rbm17	100	81.818	ENSNLEG00000033350	RBM17	97	88.333	Nomascus_leucogenys
ENSPMEG00000014864	rbm17	100	76.658	ENSMEUG00000011347	RBM17	100	75.921	Notamacropus_eugenii
ENSPMEG00000014864	rbm17	100	71.007	ENSOPRG00000002993	RBM17	100	71.007	Ochotona_princeps
ENSPMEG00000014864	rbm17	100	81.022	ENSODEG00000004393	RBM17	100	81.022	Octodon_degus
ENSPMEG00000014864	rbm17	97	61.616	ENSODEG00000007286	-	99	60.050	Octodon_degus
ENSPMEG00000014864	rbm17	100	92.611	ENSONIG00000011838	rbm17	100	92.611	Oreochromis_niloticus
ENSPMEG00000014864	rbm17	100	81.373	ENSOANG00000015455	RBM17	100	81.863	Ornithorhynchus_anatinus
ENSPMEG00000014864	rbm17	100	91.449	ENSORLG00000028798	rbm17	100	91.449	Oryzias_latipes
ENSPMEG00000014864	rbm17	100	91.449	ENSORLG00020004593	rbm17	98	91.449	Oryzias_latipes_hni
ENSPMEG00000014864	rbm17	100	92.822	ENSORLG00015000033	rbm17	100	92.822	Oryzias_latipes_hsok
ENSPMEG00000014864	rbm17	100	92.162	ENSOMEG00000012060	rbm17	100	93.750	Oryzias_melastigma
ENSPMEG00000014864	rbm17	100	81.707	ENSOGAG00000015687	RBM17	100	80.976	Otolemur_garnettii
ENSPMEG00000014864	rbm17	100	81.572	ENSOARG00000012975	RBM17	100	80.835	Ovis_aries
ENSPMEG00000014864	rbm17	100	81.818	ENSPPAG00000032347	RBM17	97	88.333	Pan_paniscus
ENSPMEG00000014864	rbm17	100	82.064	ENSPPRG00000010706	RBM17	100	81.327	Panthera_pardus
ENSPMEG00000014864	rbm17	100	82.064	ENSPTIG00000007596	RBM17	100	81.327	Panthera_tigris_altaica
ENSPMEG00000014864	rbm17	100	81.818	ENSPTRG00000002265	RBM17	97	88.333	Pan_troglodytes
ENSPMEG00000014864	rbm17	100	81.818	ENSPANG00000023425	RBM17	97	88.333	Papio_anubis
ENSPMEG00000014864	rbm17	100	81.967	ENSPKIG00000025526	rbm17	100	80.328	Paramormyrops_kingsleyae
ENSPMEG00000014864	rbm17	100	77.336	ENSPKIG00000005048	-	100	77.103	Paramormyrops_kingsleyae
ENSPMEG00000014864	rbm17	100	81.463	ENSPSIG00000012332	RBM17	100	81.463	Pelodiscus_sinensis
ENSPMEG00000014864	rbm17	100	85.185	ENSPMGG00000007980	rbm17	100	85.185	Periophthalmus_magnuspinnatus
ENSPMEG00000014864	rbm17	100	81.463	ENSPEMG00000014320	Rbm17	100	80.732	Peromyscus_maniculatus_bairdii
ENSPMEG00000014864	rbm17	100	81.663	ENSPCIG00000019260	-	100	80.929	Phascolarctos_cinereus
ENSPMEG00000014864	rbm17	100	100.000	ENSPFOG00000013271	rbm17	100	100.000	Poecilia_formosa
ENSPMEG00000014864	rbm17	100	99.525	ENSPLAG00000004455	rbm17	100	99.525	Poecilia_latipinna
ENSPMEG00000014864	rbm17	100	98.337	ENSPREG00000015589	rbm17	100	98.337	Poecilia_reticulata
ENSPMEG00000014864	rbm17	99	61.728	ENSPPYG00000019881	-	100	60.988	Pongo_abelii
ENSPMEG00000014864	rbm17	81	58.841	ENSPPYG00000019042	-	100	58.232	Pongo_abelii
ENSPMEG00000014864	rbm17	100	81.818	ENSPPYG00000002067	RBM17	100	81.818	Pongo_abelii
ENSPMEG00000014864	rbm17	100	74.447	ENSPCAG00000016879	RBM17	100	73.710	Procavia_capensis
ENSPMEG00000014864	rbm17	100	82.064	ENSPCOG00000027881	RBM17	100	82.064	Propithecus_coquereli
ENSPMEG00000014864	rbm17	100	73.219	ENSPVAG00000015499	RBM17	100	72.482	Pteropus_vampyrus
ENSPMEG00000014864	rbm17	100	81.436	ENSPNYG00000015274	rbm17	100	80.198	Pundamilia_nyererei
ENSPMEG00000014864	rbm17	100	85.106	ENSPNAG00000030046	rbm17	100	85.106	Pygocentrus_nattereri
ENSPMEG00000014864	rbm17	100	81.463	ENSRNOG00000018767	Rbm17	100	80.732	Rattus_norvegicus
ENSPMEG00000014864	rbm17	100	81.818	ENSRBIG00000043727	RBM17	97	88.333	Rhinopithecus_bieti
ENSPMEG00000014864	rbm17	100	81.818	ENSRROG00000044142	RBM17	97	88.333	Rhinopithecus_roxellana
ENSPMEG00000014864	rbm17	100	72.973	ENSSBOG00000023653	-	100	68.932	Saimiri_boliviensis_boliviensis
ENSPMEG00000014864	rbm17	100	82.064	ENSSBOG00000031661	-	92	90.351	Saimiri_boliviensis_boliviensis
ENSPMEG00000014864	rbm17	100	82.064	ENSSHAG00000012480	-	100	82.064	Sarcophilus_harrisii
ENSPMEG00000014864	rbm17	100	82.353	ENSSFOG00015009892	rbm17	100	81.618	Scleropages_formosus
ENSPMEG00000014864	rbm17	100	86.343	ENSSMAG00000012368	rbm17	100	86.343	Scophthalmus_maximus
ENSPMEG00000014864	rbm17	100	90.777	ENSSDUG00000015015	rbm17	100	90.777	Seriola_dumerili
ENSPMEG00000014864	rbm17	100	90.777	ENSSLDG00000014486	rbm17	100	90.777	Seriola_lalandi_dorsalis
ENSPMEG00000014864	rbm17	50	75.455	ENSSARG00000001792	-	79	89.024	Sorex_araneus
ENSPMEG00000014864	rbm17	99	82.512	ENSSPUG00000001036	RBM17	99	81.773	Sphenodon_punctatus
ENSPMEG00000014864	rbm17	100	94.059	ENSSPAG00000002338	rbm17	100	94.059	Stegastes_partitus
ENSPMEG00000014864	rbm17	100	81.572	ENSSSCG00000011134	RBM17	100	80.835	Sus_scrofa
ENSPMEG00000014864	rbm17	100	80.488	ENSTGUG00000002013	RBM17	100	80.488	Taeniopygia_guttata
ENSPMEG00000014864	rbm17	100	91.337	ENSTRUG00000010698	rbm17	100	91.337	Takifugu_rubripes
ENSPMEG00000014864	rbm17	100	89.409	ENSTNIG00000006892	rbm17	100	89.409	Tetraodon_nigroviridis
ENSPMEG00000014864	rbm17	100	62.963	ENSTBEG00000014686	RBM17	100	62.963	Tupaia_belangeri
ENSPMEG00000014864	rbm17	90	80.601	ENSTTRG00000001344	RBM17	100	80.601	Tursiops_truncatus
ENSPMEG00000014864	rbm17	100	77.723	ENSUAMG00000009499	RBM17	100	79.012	Ursus_americanus
ENSPMEG00000014864	rbm17	100	82.064	ENSUMAG00000012237	RBM17	100	82.064	Ursus_maritimus
ENSPMEG00000014864	rbm17	100	70.516	ENSVPAG00000005497	RBM17	100	70.516	Vicugna_pacos
ENSPMEG00000014864	rbm17	100	79.012	ENSVVUG00000006780	RBM17	100	78.272	Vulpes_vulpes
ENSPMEG00000014864	rbm17	99	78.519	ENSXETG00000018123	rbm17	100	78.272	Xenopus_tropicalis
ENSPMEG00000014864	rbm17	100	97.277	ENSXMAG00000008674	rbm17	100	97.277	Xiphophorus_maculatus