EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000014946 (Gene tree)
Gene ID: 106923436
Gene Symbol: sall3a
Alias: -
Full Name: spalt like transcription factor 3
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 14647 bases
Position: chrKQ551607.1:131576-146222
Accession: 106923436
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000012724	zf-C2H2	PF00096.26	8.6e-22	1	4
ENSPMEP00000012724	zf-C2H2	PF00096.26	8.6e-22	2	4
ENSPMEP00000012724	zf-C2H2	PF00096.26	8.6e-22	3	4
ENSPMEP00000012724	zf-C2H2	PF00096.26	8.6e-22	4	4
ENSPMEP00000012724	zf-met	PF12874.7	1.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000031916	-	6299	XM_014996451	ENSPMEP00000012724	1254 (aa)	XP_014851937	-

Gene Model

Click here to download ENSPMEG00000014946's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000014946's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000014946	sall3a	95	79.412	ENSPMEG00000020894	sall1a	88	63.265
ENSPMEG00000014946	sall3a	66	48.276	ENSPMEG00000023703	sall3b	82	48.276
ENSPMEG00000014946	sall3a	57	63.462	ENSPMEG00000008497	sall4	85	63.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000014946	sall3a	67	73.451	ENSG00000256463	SALL3	88	73.451	Homo_sapiens
ENSPMEG00000014946	sall3a	93	88.136	ENSAPOG00000020922	sall3a	87	88.220	Acanthochromis_polyacanthus
ENSPMEG00000014946	sall3a	95	50.330	ENSAPOG00000004264	sall3b	89	50.902	Acanthochromis_polyacanthus
ENSPMEG00000014946	sall3a	67	63.265	ENSAMEG00000010206	SALL3	67	63.265	Ailuropoda_melanoleuca
ENSPMEG00000014946	sall3a	72	58.113	ENSACIG00000019407	sall3b	86	57.967	Amphilophus_citrinellus
ENSPMEG00000014946	sall3a	68	91.667	ENSACIG00000014041	sall3a	84	91.667	Amphilophus_citrinellus
ENSPMEG00000014946	sall3a	95	49.836	ENSAOCG00000012779	sall3b	89	49.596	Amphiprion_ocellaris
ENSPMEG00000014946	sall3a	93	87.291	ENSAOCG00000010863	sall3a	87	87.291	Amphiprion_ocellaris
ENSPMEG00000014946	sall3a	69	57.325	ENSAPEG00000018170	sall3b	86	56.925	Amphiprion_percula
ENSPMEG00000014946	sall3a	95	90.894	ENSAPEG00000019278	sall3a	89	90.894	Amphiprion_percula
ENSPMEG00000014946	sall3a	61	58.291	ENSATEG00000004914	sall3b	90	51.626	Anabas_testudineus
ENSPMEG00000014946	sall3a	95	88.638	ENSATEG00000024524	sall3a	83	97.436	Anabas_testudineus
ENSPMEG00000014946	sall3a	93	61.760	ENSAPLG00000013214	SALL3	88	61.727	Anas_platyrhynchos
ENSPMEG00000014946	sall3a	95	61.272	ENSACAG00000000478	SALL3	89	62.345	Anolis_carolinensis
ENSPMEG00000014946	sall3a	62	57.107	ENSACLG00000001619	sall3b	90	50.282	Astatotilapia_calliptera
ENSPMEG00000014946	sall3a	95	89.223	ENSACLG00000022451	sall3a	89	89.307	Astatotilapia_calliptera
ENSPMEG00000014946	sall3a	95	72.434	ENSAMXG00000011185	sall3a	89	72.599	Astyanax_mexicanus
ENSPMEG00000014946	sall3a	99	69.643	ENSBTAG00000050200	SALL3	90	69.643	Bos_taurus
ENSPMEG00000014946	sall3a	67	71.681	ENSCJAG00000007332	SALL3	88	71.681	Callithrix_jacchus
ENSPMEG00000014946	sall3a	64	65.686	ENSCAFG00000000013	SALL3	87	60.113	Canis_familiaris
ENSPMEG00000014946	sall3a	68	69.912	ENSCAFG00020015092	SALL3	87	69.912	Canis_lupus_dingo
ENSPMEG00000014946	sall3a	67	69.643	ENSCHIG00000000145	SALL3	89	69.643	Capra_hircus
ENSPMEG00000014946	sall3a	65	64.444	ENSTSYG00000028846	SALL3	84	64.796	Carlito_syrichta
ENSPMEG00000014946	sall3a	79	72.566	ENSCAPG00000006496	SALL3	81	70.652	Cavia_aperea
ENSPMEG00000014946	sall3a	93	57.576	ENSCPOG00000008546	SALL3	88	58.594	Cavia_porcellus
ENSPMEG00000014946	sall3a	64	65.399	ENSCCAG00000034863	SALL3	88	58.059	Cebus_capucinus
ENSPMEG00000014946	sall3a	68	72.566	ENSCATG00000029727	SALL3	88	72.566	Cercocebus_atys
ENSPMEG00000014946	sall3a	67	72.566	ENSCSAG00000018244	SALL3	88	72.566	Chlorocebus_sabaeus
ENSPMEG00000014946	sall3a	55	64.545	ENSCHOG00000013939	-	74	64.545	Choloepus_hoffmanni
ENSPMEG00000014946	sall3a	99	77.876	ENSCPBG00000003657	SALL3	88	77.876	Chrysemys_picta_bellii
ENSPMEG00000014946	sall3a	70	75.439	ENSCANG00000030302	SALL3	84	75.439	Colobus_angolensis_palliatus
ENSPMEG00000014946	sall3a	99	72.566	ENSCGRG00001018203	Sall3	88	72.566	Cricetulus_griseus_chok1gshd
ENSPMEG00000014946	sall3a	93	58.953	ENSCGRG00000017127	Sall3	88	59.797	Cricetulus_griseus_crigri
ENSPMEG00000014946	sall3a	65	65.000	ENSCSEG00000009569	sall3b	83	65.000	Cynoglossus_semilaevis
ENSPMEG00000014946	sall3a	95	87.229	ENSCSEG00000009058	sall3a	89	87.062	Cynoglossus_semilaevis
ENSPMEG00000014946	sall3a	95	51.786	ENSCVAG00000017005	sall3b	91	70.115	Cyprinodon_variegatus
ENSPMEG00000014946	sall3a	68	89.474	ENSCVAG00000009684	sall3a	81	89.922	Cyprinodon_variegatus
ENSPMEG00000014946	sall3a	95	65.534	ENSDARG00000079613	sall3a	89	65.534	Danio_rerio
ENSPMEG00000014946	sall3a	95	50.537	ENSDARG00000057586	sall3b	90	50.372	Danio_rerio
ENSPMEG00000014946	sall3a	66	67.925	ENSDNOG00000025483	SALL3	82	66.981	Dasypus_novemcinctus
ENSPMEG00000014946	sall3a	65	61.538	ENSDORG00000002702	Sall3	76	61.538	Dipodomys_ordii
ENSPMEG00000014946	sall3a	69	78.788	ENSETEG00000001481	SALL3	79	67.257	Echinops_telfairi
ENSPMEG00000014946	sall3a	95	60.231	ENSEASG00005002071	SALL3	89	60.396	Equus_asinus_asinus
ENSPMEG00000014946	sall3a	95	60.314	ENSECAG00000015414	SALL3	89	60.396	Equus_caballus
ENSPMEG00000014946	sall3a	96	74.388	ENSELUG00000020351	sall3a	90	75.143	Esox_lucius
ENSPMEG00000014946	sall3a	95	50.856	ENSELUG00000009541	sall3b	90	50.488	Esox_lucius
ENSPMEG00000014946	sall3a	98	67.593	ENSFCAG00000028839	SALL3	89	67.593	Felis_catus
ENSPMEG00000014946	sall3a	95	61.469	ENSFALG00000013343	SALL3	89	61.431	Ficedula_albicollis
ENSPMEG00000014946	sall3a	63	64.619	ENSFDAG00000014697	SALL3	88	57.868	Fukomys_damarensis
ENSPMEG00000014946	sall3a	93	77.797	ENSGMOG00000006649	sall3a	89	77.449	Gadus_morhua
ENSPMEG00000014946	sall3a	99	77.876	ENSGALG00000041404	SALL3	88	77.876	Gallus_gallus
ENSPMEG00000014946	sall3a	93	92.958	ENSGAFG00000001581	sall3a	88	92.958	Gambusia_affinis
ENSPMEG00000014946	sall3a	62	47.959	ENSGAFG00000014435	-	84	61.224	Gambusia_affinis
ENSPMEG00000014946	sall3a	95	81.481	ENSGACG00000005503	sall3a	87	80.597	Gasterosteus_aculeatus
ENSPMEG00000014946	sall3a	93	61.538	ENSGACG00000002533	sall3b	90	48.889	Gasterosteus_aculeatus
ENSPMEG00000014946	sall3a	95	61.779	ENSGAGG00000000925	SALL3	89	62.097	Gopherus_agassizii
ENSPMEG00000014946	sall3a	67	73.451	ENSGGOG00000008127	SALL3	85	68.132	Gorilla_gorilla
ENSPMEG00000014946	sall3a	69	57.053	ENSHBUG00000018127	sall3b	86	57.377	Haplochromis_burtoni
ENSPMEG00000014946	sall3a	95	89.390	ENSHBUG00000004486	sall3a	89	89.474	Haplochromis_burtoni
ENSPMEG00000014946	sall3a	95	57.295	ENSHGLG00000000824	SALL3	89	58.326	Heterocephalus_glaber_female
ENSPMEG00000014946	sall3a	71	65.437	ENSHGLG00100008694	SALL3	63	65.683	Heterocephalus_glaber_male
ENSPMEG00000014946	sall3a	78	65.957	ENSHCOG00000004745	sall3b	53	65.957	Hippocampus_comes
ENSPMEG00000014946	sall3a	94	85.714	ENSHCOG00000010423	sall3a	89	85.714	Hippocampus_comes
ENSPMEG00000014946	sall3a	95	71.570	ENSIPUG00000003378	sall3	89	71.818	Ictalurus_punctatus
ENSPMEG00000014946	sall3a	70	51.101	ENSIPUG00000003006	sall3b	69	51.185	Ictalurus_punctatus
ENSPMEG00000014946	sall3a	95	58.595	ENSSTOG00000004145	SALL3	89	59.057	Ictidomys_tridecemlineatus
ENSPMEG00000014946	sall3a	99	72.566	ENSJJAG00000014351	Sall3	88	72.566	Jaculus_jaculus
ENSPMEG00000014946	sall3a	95	91.464	ENSKMAG00000003846	sall3a	89	91.464	Kryptolebias_marmoratus
ENSPMEG00000014946	sall3a	95	88.127	ENSLBEG00000005152	sall3a	89	88.127	Labrus_bergylta
ENSPMEG00000014946	sall3a	77	57.161	ENSLBEG00000015706	sall3b	86	56.781	Labrus_bergylta
ENSPMEG00000014946	sall3a	95	67.928	ENSLOCG00000007831	sall3a	89	67.490	Lepisosteus_oculatus
ENSPMEG00000014946	sall3a	96	72.566	ENSLAFG00000013521	SALL3	88	72.566	Loxodonta_africana
ENSPMEG00000014946	sall3a	82	72.566	ENSMFAG00000031402	SALL3	85	61.538	Macaca_fascicularis
ENSPMEG00000014946	sall3a	90	75.429	ENSMAMG00000001276	sall3a	88	78.402	Mastacembelus_armatus
ENSPMEG00000014946	sall3a	69	56.747	ENSMAMG00000006101	sall3b	87	56.654	Mastacembelus_armatus
ENSPMEG00000014946	sall3a	95	89.223	ENSMZEG00005007586	sall3a	89	89.307	Maylandia_zebra
ENSPMEG00000014946	sall3a	62	56.980	ENSMZEG00005026224	sall3b	90	50.363	Maylandia_zebra
ENSPMEG00000014946	sall3a	95	61.386	ENSMGAG00000002297	SALL3	89	62.345	Meleagris_gallopavo
ENSPMEG00000014946	sall3a	99	73.451	ENSMAUG00000011828	Sall3	88	73.451	Mesocricetus_auratus
ENSPMEG00000014946	sall3a	65	73.214	ENSMICG00000017395	SALL3	83	73.214	Microcebus_murinus
ENSPMEG00000014946	sall3a	95	58.833	ENSMOCG00000013205	Sall3	89	59.918	Microtus_ochrogaster
ENSPMEG00000014946	sall3a	71	87.500	ENSMMOG00000003253	sall3a	85	87.500	Mola_mola
ENSPMEG00000014946	sall3a	77	56.384	ENSMMOG00000014246	sall3b	86	55.838	Mola_mola
ENSPMEG00000014946	sall3a	95	61.519	ENSMODG00000012231	SALL3	89	62.407	Monodelphis_domestica
ENSPMEG00000014946	sall3a	61	56.314	ENSMALG00000015200	sall3b	90	49.797	Monopterus_albus
ENSPMEG00000014946	sall3a	92	87.403	ENSMALG00000003343	sall3a	88	87.317	Monopterus_albus
ENSPMEG00000014946	sall3a	95	59.802	MGP_CAROLIEiJ_G0022442	Sall3	89	60.873	Mus_caroli
ENSPMEG00000014946	sall3a	95	59.473	ENSMUSG00000024565	Sall3	89	60.544	Mus_musculus
ENSPMEG00000014946	sall3a	95	59.406	MGP_PahariEiJ_G0019170	Sall3	89	60.314	Mus_pahari
ENSPMEG00000014946	sall3a	95	59.457	MGP_SPRETEiJ_G0023357	Sall3	89	60.362	Mus_spretus
ENSPMEG00000014946	sall3a	82	60.096	ENSMPUG00000016646	SALL3	89	60.731	Mustela_putorius_furo
ENSPMEG00000014946	sall3a	95	68.142	ENSMLUG00000010582	SALL3	88	68.142	Myotis_lucifugus
ENSPMEG00000014946	sall3a	99	73.451	ENSNGAG00000023772	Sall3	88	73.451	Nannospalax_galili
ENSPMEG00000014946	sall3a	93	85.763	ENSNBRG00000008974	sall3a	89	85.847	Neolamprologus_brichardi
ENSPMEG00000014946	sall3a	71	57.305	ENSNBRG00000016034	sall3b	86	57.377	Neolamprologus_brichardi
ENSPMEG00000014946	sall3a	69	70.330	ENSNLEG00000008217	SALL3	88	71.681	Nomascus_leucogenys
ENSPMEG00000014946	sall3a	74	72.566	ENSODEG00000002692	SALL3	88	72.566	Octodon_degus
ENSPMEG00000014946	sall3a	95	79.450	ENSONIG00000007305	sall3a	89	79.369	Oreochromis_niloticus
ENSPMEG00000014946	sall3a	61	57.106	ENSONIG00000013791	sall3b	90	49.760	Oreochromis_niloticus
ENSPMEG00000014946	sall3a	64	61.557	ENSOCUG00000029398	SALL3	86	57.386	Oryctolagus_cuniculus
ENSPMEG00000014946	sall3a	95	86.371	ENSORLG00000020718	sall3a	89	86.371	Oryzias_latipes
ENSPMEG00000014946	sall3a	85	65.957	ENSORLG00020015105	sall3b	81	65.957	Oryzias_latipes_hni
ENSPMEG00000014946	sall3a	93	83.602	ENSORLG00020001794	sall3a	89	83.942	Oryzias_latipes_hni
ENSPMEG00000014946	sall3a	77	70.000	ENSORLG00015005877	sall3b	97	63.478	Oryzias_latipes_hsok
ENSPMEG00000014946	sall3a	93	83.588	ENSORLG00015018152	sall3a	83	96.552	Oryzias_latipes_hsok
ENSPMEG00000014946	sall3a	95	87.029	ENSOMEG00000011390	sall3a	89	86.946	Oryzias_melastigma
ENSPMEG00000014946	sall3a	65	61.538	ENSOGAG00000031681	SALL3	89	61.538	Otolemur_garnettii
ENSPMEG00000014946	sall3a	73	65.487	ENSOARG00000004353	SALL3	82	65.487	Ovis_aries
ENSPMEG00000014946	sall3a	72	65.909	ENSPPAG00000029586	-	83	70.492	Pan_paniscus
ENSPMEG00000014946	sall3a	67	73.451	ENSPTRG00000010126	SALL3	88	73.451	Pan_troglodytes
ENSPMEG00000014946	sall3a	67	71.681	ENSPANG00000006485	SALL3	88	71.681	Papio_anubis
ENSPMEG00000014946	sall3a	95	68.331	ENSPKIG00000013427	sall3a	97	68.838	Paramormyrops_kingsleyae
ENSPMEG00000014946	sall3a	93	63.265	ENSPKIG00000018271	SALL3	82	76.471	Paramormyrops_kingsleyae
ENSPMEG00000014946	sall3a	93	61.200	ENSPSIG00000008556	SALL3	91	62.114	Pelodiscus_sinensis
ENSPMEG00000014946	sall3a	95	80.782	ENSPMGG00000017042	sall3a	88	80.616	Periophthalmus_magnuspinnatus
ENSPMEG00000014946	sall3a	77	59.615	ENSPMGG00000002913	sall3b	85	52.010	Periophthalmus_magnuspinnatus
ENSPMEG00000014946	sall3a	99	73.451	ENSPEMG00000022799	Sall3	88	73.451	Peromyscus_maniculatus_bairdii
ENSPMEG00000014946	sall3a	99	76.991	ENSPCIG00000002472	SALL3	90	76.991	Phascolarctos_cinereus
ENSPMEG00000014946	sall3a	62	47.930	ENSPFOG00000013292	sall3b	91	43.301	Poecilia_formosa
ENSPMEG00000014946	sall3a	95	99.665	ENSPFOG00000019127	sall3a	89	99.665	Poecilia_formosa
ENSPMEG00000014946	sall3a	62	47.925	ENSPLAG00000013919	sall3b	91	43.241	Poecilia_latipinna
ENSPMEG00000014946	sall3a	95	99.163	ENSPLAG00000018123	sall3a	89	99.163	Poecilia_latipinna
ENSPMEG00000014946	sall3a	62	47.613	ENSPREG00000015079	sall3b	91	42.776	Poecilia_reticulata
ENSPMEG00000014946	sall3a	100	97.689	ENSPREG00000014420	sall3a	100	97.689	Poecilia_reticulata
ENSPMEG00000014946	sall3a	63	66.294	ENSPPYG00000009253	SALL3	88	58.481	Pongo_abelii
ENSPMEG00000014946	sall3a	97	63.265	ENSPCAG00000006522	SALL3	89	63.265	Procavia_capensis
ENSPMEG00000014946	sall3a	73	73.214	ENSPCOG00000012553	SALL3	83	73.214	Propithecus_coquereli
ENSPMEG00000014946	sall3a	96	67.857	ENSPVAG00000014645	SALL3	89	49.512	Pteropus_vampyrus
ENSPMEG00000014946	sall3a	72	57.053	ENSPNYG00000005353	sall3b	86	57.377	Pundamilia_nyererei
ENSPMEG00000014946	sall3a	93	85.763	ENSPNYG00000012783	sall3a	89	85.847	Pundamilia_nyererei
ENSPMEG00000014946	sall3a	95	48.611	ENSPNAG00000017141	sall3b	90	48.455	Pygocentrus_nattereri
ENSPMEG00000014946	sall3a	84	73.451	ENSRNOG00000026116	Sall3	85	73.451	Rattus_norvegicus
ENSPMEG00000014946	sall3a	73	73.451	ENSRROG00000034130	SALL3	85	73.451	Rhinopithecus_roxellana
ENSPMEG00000014946	sall3a	75	68.627	ENSSBOG00000023380	SALL3	84	68.627	Saimiri_boliviensis_boliviensis
ENSPMEG00000014946	sall3a	95	61.240	ENSSHAG00000015872	SALL3	89	62.706	Sarcophilus_harrisii
ENSPMEG00000014946	sall3a	76	80.000	ENSSFOG00015009159	SALL3	82	68.354	Scleropages_formosus
ENSPMEG00000014946	sall3a	72	92.857	ENSSFOG00015012223	sall3a	84	92.857	Scleropages_formosus
ENSPMEG00000014946	sall3a	95	49.114	ENSSMAG00000019762	sall3b	90	49.678	Scophthalmus_maximus
ENSPMEG00000014946	sall3a	95	88.676	ENSSMAG00000007674	sall3a	89	88.759	Scophthalmus_maximus
ENSPMEG00000014946	sall3a	95	86.322	ENSSDUG00000011099	sall3a	89	86.405	Seriola_dumerili
ENSPMEG00000014946	sall3a	71	59.039	ENSSDUG00000010584	sall3b	86	58.764	Seriola_dumerili
ENSPMEG00000014946	sall3a	95	86.239	ENSSLDG00000012706	sall3a	89	86.322	Seriola_lalandi_dorsalis
ENSPMEG00000014946	sall3a	62	59.212	ENSSLDG00000016800	sall3b	90	51.789	Seriola_lalandi_dorsalis
ENSPMEG00000014946	sall3a	91	94.393	ENSSPAG00000013114	sall3a	89	90.678	Stegastes_partitus
ENSPMEG00000014946	sall3a	67	57.806	ENSSPAG00000003172	sall3b	86	57.179	Stegastes_partitus
ENSPMEG00000014946	sall3a	99	68.750	ENSSSCG00000004858	SALL3	90	68.750	Sus_scrofa
ENSPMEG00000014946	sall3a	93	58.116	ENSTGUG00000006541	SALL3	88	58.249	Taeniopygia_guttata
ENSPMEG00000014946	sall3a	54	65.217	ENSTRUG00000003369	sall3b	61	65.217	Takifugu_rubripes
ENSPMEG00000014946	sall3a	65	93.023	ENSTRUG00000017423	sall3a	84	93.023	Takifugu_rubripes
ENSPMEG00000014946	sall3a	64	82.306	ENSTNIG00000001257	sall3a	100	79.249	Tetraodon_nigroviridis
ENSPMEG00000014946	sall3a	91	54.520	ENSTBEG00000008964	SALL3	74	55.117	Tupaia_belangeri
ENSPMEG00000014946	sall3a	67	70.435	ENSTTRG00000004958	SALL3	75	70.435	Tursiops_truncatus
ENSPMEG00000014946	sall3a	99	69.912	ENSUAMG00000016908	SALL3	89	69.912	Ursus_americanus
ENSPMEG00000014946	sall3a	73	85.714	ENSVVUG00000018838	SALL3	84	80.645	Vulpes_vulpes
ENSPMEG00000014946	sall3a	95	60.082	ENSXETG00000000845	sall3	89	60.723	Xenopus_tropicalis
ENSPMEG00000014946	sall3a	67	48.529	ENSXCOG00000018799	sall3b	72	61.224	Xiphophorus_couchianus
ENSPMEG00000014946	sall3a	93	88.149	ENSXCOG00000016907	sall3a	88	88.149	Xiphophorus_couchianus
ENSPMEG00000014946	sall3a	96	45.333	ENSXMAG00000000798	sall3b	97	45.333	Xiphophorus_maculatus
ENSPMEG00000014946	sall3a	99	97.249	ENSXMAG00000023447	sall3a	100	97.249	Xiphophorus_maculatus