EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000015106 (Gene tree)
Gene ID: 106916744
Gene Symbol: chd9
Alias: -
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 83444 bases
Position: chrKQ551201.1:65269-148712
Accession: 106916744
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000029340	ResIII	PF04851.15	2.1e-06	1	1
ENSPMEP00000029340	BRK	PF07533.16	2.2e-32	1	2
ENSPMEP00000029340	BRK	PF07533.16	2.2e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000031940	-	8697	XM_014985233	ENSPMEP00000029340	2898 (aa)	XP_014840719	-

Gene Model

Click here to download ENSPMEG00000015106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000015106's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000015106	chd9	67	68.061	ENSPMEG00000005879	chd7	80	68.941
ENSPMEG00000015106	chd9	59	60.881	ENSPMEG00000006541	chd8	70	60.789

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000015106	chd9	96	61.030	ENSG00000177200	CHD9	95	70.586	Homo_sapiens
ENSPMEG00000015106	chd9	99	83.106	ENSAPOG00000023034	chd9	99	87.404	Acanthochromis_polyacanthus
ENSPMEG00000015106	chd9	99	60.698	ENSAMEG00000016232	CHD9	84	71.245	Ailuropoda_melanoleuca
ENSPMEG00000015106	chd9	99	80.069	ENSACIG00000004097	chd9	72	78.871	Amphilophus_citrinellus
ENSPMEG00000015106	chd9	99	83.933	ENSAOCG00000005487	chd9	99	87.601	Amphiprion_ocellaris
ENSPMEG00000015106	chd9	99	83.967	ENSAPEG00000009859	chd9	99	87.641	Amphiprion_percula
ENSPMEG00000015106	chd9	99	80.933	ENSATEG00000002748	chd9	99	80.040	Anabas_testudineus
ENSPMEG00000015106	chd9	99	61.334	ENSAPLG00000002826	CHD9	56	77.141	Anas_platyrhynchos
ENSPMEG00000015106	chd9	74	62.607	ENSACAG00000016150	CHD9	83	71.073	Anolis_carolinensis
ENSPMEG00000015106	chd9	93	67.481	ENSANAG00000015630	CHD9	93	69.258	Aotus_nancymaae
ENSPMEG00000015106	chd9	99	80.144	ENSACLG00000016899	chd9	99	79.721	Astatotilapia_calliptera
ENSPMEG00000015106	chd9	83	75.030	ENSAMXG00000005652	chd9	97	76.949	Astyanax_mexicanus
ENSPMEG00000015106	chd9	89	66.096	ENSBTAG00000002287	CHD9	84	70.478	Bos_taurus
ENSPMEG00000015106	chd9	95	65.925	ENSCJAG00000001573	CHD9	93	69.611	Callithrix_jacchus
ENSPMEG00000015106	chd9	68	71.405	ENSCAFG00000009699	CHD9	84	71.227	Canis_familiaris
ENSPMEG00000015106	chd9	68	71.405	ENSCAFG00020002879	CHD9	91	70.318	Canis_lupus_dingo
ENSPMEG00000015106	chd9	95	66.485	ENSTSYG00000007693	CHD9	91	69.204	Carlito_syrichta
ENSPMEG00000015106	chd9	66	55.789	ENSCAPG00000011604	CHD9	59	62.464	Cavia_aperea
ENSPMEG00000015106	chd9	70	66.704	ENSCPOG00000036544	CHD9	83	67.155	Cavia_porcellus
ENSPMEG00000015106	chd9	74	61.779	ENSCCAG00000036178	CHD9	93	70.213	Cebus_capucinus
ENSPMEG00000015106	chd9	66	71.140	ENSCATG00000036753	CHD9	91	70.318	Cercocebus_atys
ENSPMEG00000015106	chd9	99	59.973	ENSCLAG00000007137	CHD9	94	80.266	Chinchilla_lanigera
ENSPMEG00000015106	chd9	66	71.084	ENSCSAG00000005311	CHD9	84	70.689	Chlorocebus_sabaeus
ENSPMEG00000015106	chd9	69	84.615	ENSCHOG00000003935	CHD9	54	91.361	Choloepus_hoffmanni
ENSPMEG00000015106	chd9	90	82.823	ENSCPBG00000012459	CHD9	83	80.403	Chrysemys_picta_bellii
ENSPMEG00000015106	chd9	66	71.084	ENSCANG00000030349	CHD9	91	70.318	Colobus_angolensis_palliatus
ENSPMEG00000015106	chd9	99	60.366	ENSCGRG00001016150	Chd9	79	70.543	Cricetulus_griseus_chok1gshd
ENSPMEG00000015106	chd9	99	60.366	ENSCGRG00000012850	Chd9	94	80.024	Cricetulus_griseus_crigri
ENSPMEG00000015106	chd9	99	76.471	ENSCSEG00000009209	chd9	99	81.225	Cynoglossus_semilaevis
ENSPMEG00000015106	chd9	99	88.672	ENSCVAG00000016195	chd9	99	87.714	Cyprinodon_variegatus
ENSPMEG00000015106	chd9	83	75.040	ENSDARG00000074498	chd9	97	76.449	Danio_rerio
ENSPMEG00000015106	chd9	80	69.244	ENSDNOG00000006045	CHD9	96	71.278	Dasypus_novemcinctus
ENSPMEG00000015106	chd9	68	69.955	ENSDORG00000008523	-	96	71.224	Dipodomys_ordii
ENSPMEG00000015106	chd9	84	92.063	ENSETEG00000009565	CHD9	76	92.063	Echinops_telfairi
ENSPMEG00000015106	chd9	81	78.581	ENSEASG00005014832	CHD9	95	78.351	Equus_asinus_asinus
ENSPMEG00000015106	chd9	70	71.293	ENSECAG00000011505	CHD9	84	70.731	Equus_caballus
ENSPMEG00000015106	chd9	70	87.665	ENSEEUG00000014515	CHD9	72	84.530	Erinaceus_europaeus
ENSPMEG00000015106	chd9	88	77.486	ENSELUG00000006031	chd9	93	77.209	Esox_lucius
ENSPMEG00000015106	chd9	99	60.542	ENSFCAG00000022534	CHD9	91	70.671	Felis_catus
ENSPMEG00000015106	chd9	82	69.181	ENSFALG00000013276	CHD9	95	70.962	Ficedula_albicollis
ENSPMEG00000015106	chd9	99	59.729	ENSFDAG00000021037	CHD9	85	69.885	Fukomys_damarensis
ENSPMEG00000015106	chd9	99	88.528	ENSFHEG00000006068	chd9	99	89.826	Fundulus_heteroclitus
ENSPMEG00000015106	chd9	67	85.802	ENSGMOG00000006040	chd9	84	85.190	Gadus_morhua
ENSPMEG00000015106	chd9	94	62.904	ENSGALG00000039178	CHD9	85	72.544	Gallus_gallus
ENSPMEG00000015106	chd9	99	93.349	ENSGAFG00000010014	chd9	99	94.669	Gambusia_affinis
ENSPMEG00000015106	chd9	74	61.879	ENSGGOG00000014816	CHD9	93	69.965	Gorilla_gorilla
ENSPMEG00000015106	chd9	99	80.767	ENSHBUG00000023322	chd9	99	85.888	Haplochromis_burtoni
ENSPMEG00000015106	chd9	88	66.601	ENSHGLG00000014938	CHD9	96	78.835	Heterocephalus_glaber_female
ENSPMEG00000015106	chd9	96	74.898	ENSHCOG00000000937	chd9	97	80.256	Hippocampus_comes
ENSPMEG00000015106	chd9	83	76.675	ENSIPUG00000016448	chd9	96	77.694	Ictalurus_punctatus
ENSPMEG00000015106	chd9	94	66.457	ENSSTOG00000022273	CHD9	94	80.121	Ictidomys_tridecemlineatus
ENSPMEG00000015106	chd9	66	71.480	ENSJJAG00000015741	-	96	71.523	Jaculus_jaculus
ENSPMEG00000015106	chd9	96	83.858	ENSKMAG00000016784	chd9	96	88.399	Kryptolebias_marmoratus
ENSPMEG00000015106	chd9	93	82.623	ENSLBEG00000012077	chd9	96	86.650	Labrus_bergylta
ENSPMEG00000015106	chd9	99	58.018	ENSLACG00000005557	CHD9	84	66.950	Latimeria_chalumnae
ENSPMEG00000015106	chd9	98	65.496	ENSLOCG00000007225	chd9	68	80.355	Lepisosteus_oculatus
ENSPMEG00000015106	chd9	63	70.941	ENSLAFG00000015374	CHD9	84	70.259	Loxodonta_africana
ENSPMEG00000015106	chd9	78	69.466	ENSMFAG00000041354	CHD9	94	70.923	Macaca_fascicularis
ENSPMEG00000015106	chd9	74	61.834	ENSMMUG00000016310	CHD9	91	70.318	Macaca_mulatta
ENSPMEG00000015106	chd9	89	61.598	ENSMNEG00000031494	CHD9	85	72.201	Macaca_nemestrina
ENSPMEG00000015106	chd9	66	71.140	ENSMLEG00000043219	CHD9	91	70.318	Mandrillus_leucophaeus
ENSPMEG00000015106	chd9	99	80.720	ENSMAMG00000003909	chd9	99	79.873	Mastacembelus_armatus
ENSPMEG00000015106	chd9	99	81.554	ENSMZEG00005006581	chd9	99	85.939	Maylandia_zebra
ENSPMEG00000015106	chd9	85	62.930	ENSMGAG00000004642	CHD9	58	71.814	Meleagris_gallopavo
ENSPMEG00000015106	chd9	99	60.567	ENSMICG00000016679	CHD9	91	69.896	Microcebus_murinus
ENSPMEG00000015106	chd9	99	78.623	ENSMMOG00000016406	chd9	74	79.262	Mola_mola
ENSPMEG00000015106	chd9	72	75.758	ENSMODG00000013142	-	96	77.263	Monodelphis_domestica
ENSPMEG00000015106	chd9	99	79.829	ENSMALG00000013306	chd9	99	79.817	Monopterus_albus
ENSPMEG00000015106	chd9	96	61.233	ENSMUSG00000056608	Chd9	94	78.935	Mus_musculus
ENSPMEG00000015106	chd9	99	59.283	MGP_PahariEiJ_G0022964	Chd9	84	69.217	Mus_pahari
ENSPMEG00000015106	chd9	96	61.044	MGP_SPRETEiJ_G0032483	Chd9	79	70.095	Mus_spretus
ENSPMEG00000015106	chd9	70	71.389	ENSMPUG00000003285	CHD9	84	71.142	Mustela_putorius_furo
ENSPMEG00000015106	chd9	64	70.910	ENSMLUG00000004456	CHD9	84	69.821	Myotis_lucifugus
ENSPMEG00000015106	chd9	99	81.215	ENSNBRG00000009423	chd9	99	85.490	Neolamprologus_brichardi
ENSPMEG00000015106	chd9	81	68.885	ENSNLEG00000001026	CHD9	85	72.372	Nomascus_leucogenys
ENSPMEG00000015106	chd9	64	93.985	ENSMEUG00000008222	-	74	91.083	Notamacropus_eugenii
ENSPMEG00000015106	chd9	95	66.016	ENSODEG00000004466	CHD9	84	70.133	Octodon_degus
ENSPMEG00000015106	chd9	81	86.838	ENSONIG00000002816	chd9	98	86.341	Oreochromis_niloticus
ENSPMEG00000015106	chd9	82	68.503	ENSOCUG00000001016	CHD9	94	70.921	Oryctolagus_cuniculus
ENSPMEG00000015106	chd9	97	80.175	ENSORLG00000013810	chd9	97	80.211	Oryzias_latipes
ENSPMEG00000015106	chd9	98	79.040	ENSORLG00020020665	chd9	99	78.865	Oryzias_latipes_hni
ENSPMEG00000015106	chd9	98	80.013	ENSORLG00015019126	chd9	97	85.191	Oryzias_latipes_hsok
ENSPMEG00000015106	chd9	64	79.240	ENSOMEG00000015978	chd9	99	78.601	Oryzias_melastigma
ENSPMEG00000015106	chd9	91	66.562	ENSOGAG00000002110	CHD9	84	70.568	Otolemur_garnettii
ENSPMEG00000015106	chd9	89	65.941	ENSOARG00000017664	CHD9	84	70.345	Ovis_aries
ENSPMEG00000015106	chd9	79	69.073	ENSPPAG00000039388	-	96	69.949	Pan_paniscus
ENSPMEG00000015106	chd9	99	60.509	ENSPPRG00000004801	CHD9	91	70.318	Panthera_pardus
ENSPMEG00000015106	chd9	99	59.584	ENSPTIG00000021854	CHD9	84	69.812	Panthera_tigris_altaica
ENSPMEG00000015106	chd9	96	61.009	ENSPTRG00000008113	CHD9	93	69.965	Pan_troglodytes
ENSPMEG00000015106	chd9	85	66.368	ENSPANG00000019307	CHD9	95	70.726	Papio_anubis
ENSPMEG00000015106	chd9	96	67.545	ENSPKIG00000021876	chd9	96	76.734	Paramormyrops_kingsleyae
ENSPMEG00000015106	chd9	98	62.324	ENSPKIG00000025401	-	69	68.084	Paramormyrops_kingsleyae
ENSPMEG00000015106	chd9	51	72.764	ENSPSIG00000008099	CHD9	71	77.885	Pelodiscus_sinensis
ENSPMEG00000015106	chd9	79	70.833	ENSPCIG00000017215	CHD9	88	76.582	Phascolarctos_cinereus
ENSPMEG00000015106	chd9	99	94.905	ENSPFOG00000015839	chd9	100	94.905	Poecilia_formosa
ENSPMEG00000015106	chd9	99	94.576	ENSPLAG00000011118	chd9	99	95.936	Poecilia_latipinna
ENSPMEG00000015106	chd9	100	96.437	ENSPREG00000006473	chd9	100	96.437	Poecilia_reticulata
ENSPMEG00000015106	chd9	74	61.790	ENSPPYG00000007348	CHD9	85	70.518	Pongo_abelii
ENSPMEG00000015106	chd9	63	78.733	ENSPCAG00000007564	CHD9	74	81.073	Procavia_capensis
ENSPMEG00000015106	chd9	99	58.839	ENSPCOG00000028433	CHD9	91	69.611	Propithecus_coquereli
ENSPMEG00000015106	chd9	87	67.447	ENSPVAG00000015617	CHD9	81	72.908	Pteropus_vampyrus
ENSPMEG00000015106	chd9	99	81.388	ENSPNYG00000010947	chd9	99	85.012	Pundamilia_nyererei
ENSPMEG00000015106	chd9	96	69.191	ENSPNAG00000024141	chd9	97	76.898	Pygocentrus_nattereri
ENSPMEG00000015106	chd9	89	59.579	ENSRNOG00000049302	Chd9	94	57.614	Rattus_norvegicus
ENSPMEG00000015106	chd9	82	68.226	ENSRBIG00000035553	CHD9	95	70.817	Rhinopithecus_bieti
ENSPMEG00000015106	chd9	81	69.101	ENSRROG00000033278	CHD9	96	70.860	Rhinopithecus_roxellana
ENSPMEG00000015106	chd9	96	60.953	ENSSBOG00000030240	CHD9	93	69.611	Saimiri_boliviensis_boliviensis
ENSPMEG00000015106	chd9	99	60.138	ENSSHAG00000002719	CHD9	79	70.940	Sarcophilus_harrisii
ENSPMEG00000015106	chd9	96	67.641	ENSSFOG00015020209	chd9	97	76.314	Scleropages_formosus
ENSPMEG00000015106	chd9	98	65.210	ENSSFOG00015001327	chd9	69	78.504	Scleropages_formosus
ENSPMEG00000015106	chd9	96	81.309	ENSSMAG00000008953	chd9	99	86.301	Scophthalmus_maximus
ENSPMEG00000015106	chd9	99	81.457	ENSSDUG00000006139	chd9	99	86.758	Seriola_dumerili
ENSPMEG00000015106	chd9	99	82.099	ENSSLDG00000017818	chd9	99	87.369	Seriola_lalandi_dorsalis
ENSPMEG00000015106	chd9	67	77.852	ENSSARG00000010632	CHD9	57	78.162	Sorex_araneus
ENSPMEG00000015106	chd9	83	87.848	ENSSPAG00000021649	chd9	99	87.364	Stegastes_partitus
ENSPMEG00000015106	chd9	95	65.473	ENSSSCG00000033591	CHD9	61	75.351	Sus_scrofa
ENSPMEG00000015106	chd9	75	70.088	ENSTGUG00000007476	CHD9	80	72.911	Taeniopygia_guttata
ENSPMEG00000015106	chd9	56	86.603	ENSTNIG00000003825	chd9	86	86.603	Tetraodon_nigroviridis
ENSPMEG00000015106	chd9	51	94.915	ENSTBEG00000016052	-	62	94.915	Tupaia_belangeri
ENSPMEG00000015106	chd9	85	67.752	ENSTTRG00000012674	CHD9	77	70.971	Tursiops_truncatus
ENSPMEG00000015106	chd9	63	67.356	ENSUAMG00000022706	CHD9	95	69.507	Ursus_americanus
ENSPMEG00000015106	chd9	85	67.150	ENSUMAG00000004043	CHD9	95	85.983	Ursus_maritimus
ENSPMEG00000015106	chd9	67	76.046	ENSVPAG00000001374	CHD9	81	70.268	Vicugna_pacos
ENSPMEG00000015106	chd9	68	71.349	ENSVVUG00000019435	CHD9	84	71.202	Vulpes_vulpes
ENSPMEG00000015106	chd9	89	64.928	ENSXETG00000000349	chd9	77	75.475	Xenopus_tropicalis
ENSPMEG00000015106	chd9	83	96.265	ENSXCOG00000012997	chd9	99	96.265	Xiphophorus_couchianus
ENSPMEG00000015106	chd9	99	94.309	ENSXMAG00000016192	chd9	100	95.661	Xiphophorus_maculatus