EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000015233 (Gene tree)
Gene ID: 106929955
Gene Symbol: si:dkey-37o8.1
Alias: -
Full Name: elongation factor 1-alpha-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 3656 bases
Position: chrKQ552172.1:314992-318647
Accession: 106929955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000013004	GTP_EFTU	PF00009.27	1.2e-53	1	1
ENSPMEP00000013004	MMR_HSR1	PF01926.23	8.8e-08	1	1
ENSPMEP00000013004	GTP_EFTU_D2	PF03144.25	4.5e-13	1	1
ENSPMEP00000013004	GTP_EFTU_D3	PF03143.17	5.2e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000020579	-	2080	XM_015007219	ENSPMEP00000013004	457 (aa)	XP_014862705	UPI00072E77E6

Gene Model

Click here to download ENSPMEG00000015233's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000015233's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000015233	si:dkey-37o8.1	94	38.515	ENSPMEG00000007020	-	82	37.269
ENSPMEG00000015233	si:dkey-37o8.1	96	30.425	ENSPMEG00000019508	tufm	87	30.425
ENSPMEG00000015233	si:dkey-37o8.1	98	68.904	ENSPMEG00000001010	-	100	67.896
ENSPMEG00000015233	si:dkey-37o8.1	99	69.518	ENSPMEG00000001013	-	99	69.518
ENSPMEG00000015233	si:dkey-37o8.1	100	68.182	ENSPMEG00000003454	EEF1A1	100	68.182
ENSPMEG00000015233	si:dkey-37o8.1	96	30.425	ENSPMEG00000014520	-	89	30.425
ENSPMEG00000015233	si:dkey-37o8.1	96	39.278	ENSPMEG00000000925	hbs1l	64	39.278
ENSPMEG00000015233	si:dkey-37o8.1	100	68.182	ENSPMEG00000019928	eef1a1b	100	68.182
ENSPMEG00000015233	si:dkey-37o8.1	96	38.128	ENSPMEG00000022359	gspt1l	75	38.128

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000015233	si:dkey-37o8.1	98	91.071	ENSAPOG00000016459	si:dkey-37o8.1	98	91.071	Acanthochromis_polyacanthus
ENSPMEG00000015233	si:dkey-37o8.1	98	86.976	ENSACIG00000020985	si:dkey-37o8.1	85	86.976	Amphilophus_citrinellus
ENSPMEG00000015233	si:dkey-37o8.1	100	90.591	ENSAOCG00000002663	si:dkey-37o8.1	100	90.591	Amphiprion_ocellaris
ENSPMEG00000015233	si:dkey-37o8.1	100	90.591	ENSAPEG00000012670	si:dkey-37o8.1	100	90.591	Amphiprion_percula
ENSPMEG00000015233	si:dkey-37o8.1	92	91.706	ENSATEG00000002217	si:dkey-37o8.1	99	91.706	Anabas_testudineus
ENSPMEG00000015233	si:dkey-37o8.1	98	89.955	ENSACLG00000003519	si:dkey-37o8.1	98	89.955	Astatotilapia_calliptera
ENSPMEG00000015233	si:dkey-37o8.1	100	84.279	ENSAMXG00000002728	si:dkey-37o8.1	100	84.279	Astyanax_mexicanus
ENSPMEG00000015233	si:dkey-37o8.1	98	72.222	ENSCPBG00000020570	-	89	72.222	Chrysemys_picta_bellii
ENSPMEG00000015233	si:dkey-37o8.1	98	85.398	ENSCSEG00000019807	si:dkey-37o8.1	98	84.683	Cynoglossus_semilaevis
ENSPMEG00000015233	si:dkey-37o8.1	99	93.187	ENSCVAG00000009828	si:dkey-37o8.1	99	93.187	Cyprinodon_variegatus
ENSPMEG00000015233	si:dkey-37o8.1	100	81.441	ENSDARG00000071727	si:dkey-37o8.1	95	81.441	Danio_rerio
ENSPMEG00000015233	si:dkey-37o8.1	100	84.498	ENSELUG00000007495	si:dkey-37o8.1	100	84.498	Esox_lucius
ENSPMEG00000015233	si:dkey-37o8.1	100	93.873	ENSFHEG00000017452	si:dkey-37o8.1	100	93.873	Fundulus_heteroclitus
ENSPMEG00000015233	si:dkey-37o8.1	99	79.736	ENSGMOG00000006122	si:dkey-37o8.1	100	79.736	Gadus_morhua
ENSPMEG00000015233	si:dkey-37o8.1	98	89.732	ENSGAFG00000000367	si:dkey-37o8.1	99	89.732	Gambusia_affinis
ENSPMEG00000015233	si:dkey-37o8.1	100	87.090	ENSGACG00000004505	si:dkey-37o8.1	100	87.090	Gasterosteus_aculeatus
ENSPMEG00000015233	si:dkey-37o8.1	96	74.318	ENSGAGG00000007724	-	93	76.923	Gopherus_agassizii
ENSPMEG00000015233	si:dkey-37o8.1	98	89.732	ENSHBUG00000015515	si:dkey-37o8.1	98	89.732	Haplochromis_burtoni
ENSPMEG00000015233	si:dkey-37o8.1	99	80.266	ENSHCOG00000001215	si:dkey-37o8.1	100	80.266	Hippocampus_comes
ENSPMEG00000015233	si:dkey-37o8.1	100	82.751	ENSIPUG00000004067	si:dkey-37o8.1	100	82.751	Ictalurus_punctatus
ENSPMEG00000015233	si:dkey-37o8.1	100	92.123	ENSKMAG00000015910	si:dkey-37o8.1	100	92.123	Kryptolebias_marmoratus
ENSPMEG00000015233	si:dkey-37o8.1	99	90.244	ENSLBEG00000021334	si:dkey-37o8.1	90	90.244	Labrus_bergylta
ENSPMEG00000015233	si:dkey-37o8.1	99	75.771	ENSLACG00000003948	si:dkey-37o8.1	99	75.771	Latimeria_chalumnae
ENSPMEG00000015233	si:dkey-37o8.1	100	80.392	ENSLOCG00000011245	si:dkey-37o8.1	100	80.392	Lepisosteus_oculatus
ENSPMEG00000015233	si:dkey-37o8.1	99	75.000	ENSMAMG00000009907	si:dkey-37o8.1	95	75.000	Mastacembelus_armatus
ENSPMEG00000015233	si:dkey-37o8.1	98	89.955	ENSMZEG00005018358	si:dkey-37o8.1	98	89.955	Maylandia_zebra
ENSPMEG00000015233	si:dkey-37o8.1	98	89.286	ENSMMOG00000004111	si:dkey-37o8.1	98	89.286	Mola_mola
ENSPMEG00000015233	si:dkey-37o8.1	96	80.822	ENSMALG00000017152	si:dkey-37o8.1	99	80.822	Monopterus_albus
ENSPMEG00000015233	si:dkey-37o8.1	98	89.732	ENSNBRG00000013552	si:dkey-37o8.1	98	89.732	Neolamprologus_brichardi
ENSPMEG00000015233	si:dkey-37o8.1	98	89.732	ENSONIG00000006165	si:dkey-37o8.1	98	89.732	Oreochromis_niloticus
ENSPMEG00000015233	si:dkey-37o8.1	100	90.591	ENSORLG00000019066	si:dkey-37o8.1	100	90.591	Oryzias_latipes
ENSPMEG00000015233	si:dkey-37o8.1	100	90.591	ENSORLG00020008094	si:dkey-37o8.1	100	90.591	Oryzias_latipes_hni
ENSPMEG00000015233	si:dkey-37o8.1	100	90.372	ENSORLG00015008410	si:dkey-37o8.1	100	90.372	Oryzias_latipes_hsok
ENSPMEG00000015233	si:dkey-37o8.1	100	90.810	ENSOMEG00000001868	si:dkey-37o8.1	100	90.810	Oryzias_melastigma
ENSPMEG00000015233	si:dkey-37o8.1	100	82.571	ENSPKIG00000017246	si:dkey-37o8.1	100	82.571	Paramormyrops_kingsleyae
ENSPMEG00000015233	si:dkey-37o8.1	59	67.518	ENSPSIG00000008080	-	96	67.518	Pelodiscus_sinensis
ENSPMEG00000015233	si:dkey-37o8.1	100	99.562	ENSPFOG00000013173	si:dkey-37o8.1	100	99.562	Poecilia_formosa
ENSPMEG00000015233	si:dkey-37o8.1	100	97.812	ENSPLAG00000010405	si:dkey-37o8.1	100	97.812	Poecilia_latipinna
ENSPMEG00000015233	si:dkey-37o8.1	99	97.797	ENSPREG00000006280	si:dkey-37o8.1	100	97.797	Poecilia_reticulata
ENSPMEG00000015233	si:dkey-37o8.1	98	89.286	ENSPNYG00000002059	si:dkey-37o8.1	98	89.286	Pundamilia_nyererei
ENSPMEG00000015233	si:dkey-37o8.1	100	83.843	ENSPNAG00000009990	si:dkey-37o8.1	100	83.843	Pygocentrus_nattereri
ENSPMEG00000015233	si:dkey-37o8.1	99	82.119	ENSSFOG00015019070	si:dkey-37o8.1	99	82.119	Scleropages_formosus
ENSPMEG00000015233	si:dkey-37o8.1	99	90.687	ENSSMAG00000016143	si:dkey-37o8.1	99	90.687	Scophthalmus_maximus
ENSPMEG00000015233	si:dkey-37o8.1	100	90.810	ENSSDUG00000009163	si:dkey-37o8.1	100	90.810	Seriola_dumerili
ENSPMEG00000015233	si:dkey-37o8.1	100	90.591	ENSSLDG00000023761	si:dkey-37o8.1	100	90.591	Seriola_lalandi_dorsalis
ENSPMEG00000015233	si:dkey-37o8.1	99	70.419	ENSSPUG00000007467	-	98	70.667	Sphenodon_punctatus
ENSPMEG00000015233	si:dkey-37o8.1	99	91.372	ENSSPAG00000013856	si:dkey-37o8.1	99	91.372	Stegastes_partitus
ENSPMEG00000015233	si:dkey-37o8.1	97	90.112	ENSTRUG00000009006	si:dkey-37o8.1	99	90.112	Takifugu_rubripes
ENSPMEG00000015233	si:dkey-37o8.1	98	89.732	ENSTNIG00000017138	si:dkey-37o8.1	97	89.732	Tetraodon_nigroviridis
ENSPMEG00000015233	si:dkey-37o8.1	96	75.854	ENSXETG00000017744	42Sp50	97	74.501	Xenopus_tropicalis
ENSPMEG00000015233	si:dkey-37o8.1	99	96.916	ENSXCOG00000012296	si:dkey-37o8.1	100	96.916	Xiphophorus_couchianus
ENSPMEG00000015233	si:dkey-37o8.1	100	96.937	ENSXMAG00000001998	si:dkey-37o8.1	100	96.937	Xiphophorus_maculatus