EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000015529 (Gene tree)
Gene ID: 106924762
Gene Symbol: -
Alias: -
Full Name: APOBEC1 complementation factor-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 7678 bases
Position: chrKQ551701.1:353809-361486
Accession: 106924762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000029635	DND1_DSRM	PF14709.7	2.6e-25	1	1
ENSPMEP00000029635	RRM_1	PF00076.22	4.7e-30	1	2
ENSPMEP00000029635	RRM_1	PF00076.22	4.7e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000032124	-	1692	XM_014998626	ENSPMEP00000029635	563 (aa)	XP_014854112	-

Gene Model

Click here to download ENSPMEG00000015529's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000015529's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000015529	-	100	98.579	ENSPMEG00000000921	a1cf	100	98.579
ENSPMEG00000015529	-	84	45.714	ENSPMEG00000015724	rbm46	76	68.443

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000015529	-	100	69.771	ENSG00000148584	A1CF	100	87.129	Homo_sapiens
ENSPMEG00000015529	-	100	75.559	ENSAPOG00000008259	a1cf	100	74.760	Acanthochromis_polyacanthus
ENSPMEG00000015529	-	100	68.791	ENSAMEG00000000523	A1CF	100	68.137	Ailuropoda_melanoleuca
ENSPMEG00000015529	-	100	81.209	ENSACIG00000008632	a1cf	100	81.373	Amphilophus_citrinellus
ENSPMEG00000015529	-	100	77.036	ENSAOCG00000023744	a1cf	100	76.873	Amphiprion_ocellaris
ENSPMEG00000015529	-	100	78.176	ENSAPEG00000009537	a1cf	100	78.013	Amphiprion_percula
ENSPMEG00000015529	-	100	81.759	ENSATEG00000013720	a1cf	100	81.759	Anabas_testudineus
ENSPMEG00000015529	-	100	70.261	ENSAPLG00000002964	A1CF	100	68.791	Anas_platyrhynchos
ENSPMEG00000015529	-	100	69.118	ENSACAG00000015269	A1CF	100	68.627	Anolis_carolinensis
ENSPMEG00000015529	-	100	69.444	ENSANAG00000019974	A1CF	100	67.647	Aotus_nancymaae
ENSPMEG00000015529	-	100	77.288	ENSACLG00000017428	a1cf	100	76.634	Astatotilapia_calliptera
ENSPMEG00000015529	-	100	69.318	ENSAMXG00000018180	a1cf	100	68.182	Astyanax_mexicanus
ENSPMEG00000015529	-	100	69.281	ENSBTAG00000021195	A1CF	100	68.137	Bos_taurus
ENSPMEG00000015529	-	100	70.425	ENSCJAG00000005045	A1CF	100	68.627	Callithrix_jacchus
ENSPMEG00000015529	-	100	69.608	ENSCAFG00000015581	A1CF	100	68.137	Canis_familiaris
ENSPMEG00000015529	-	100	69.608	ENSCAFG00020026421	A1CF	100	68.137	Canis_lupus_dingo
ENSPMEG00000015529	-	100	70.915	ENSCHIG00000020411	A1CF	100	69.771	Capra_hircus
ENSPMEG00000015529	-	94	69.204	ENSTSYG00000001755	A1CF	100	66.609	Carlito_syrichta
ENSPMEG00000015529	-	100	53.108	ENSCAPG00000017386	A1CF	83	71.705	Cavia_aperea
ENSPMEG00000015529	-	100	69.444	ENSCPOG00000009807	A1CF	100	67.810	Cavia_porcellus
ENSPMEG00000015529	-	100	70.425	ENSCCAG00000018168	A1CF	100	68.464	Cebus_capucinus
ENSPMEG00000015529	-	100	68.627	ENSCATG00000043715	A1CF	100	67.157	Cercocebus_atys
ENSPMEG00000015529	-	100	69.444	ENSCLAG00000010424	A1CF	100	67.484	Chinchilla_lanigera
ENSPMEG00000015529	-	100	69.771	ENSCSAG00000007032	A1CF	100	68.301	Chlorocebus_sabaeus
ENSPMEG00000015529	-	97	65.785	ENSCHOG00000009089	A1CF	94	66.151	Choloepus_hoffmanni
ENSPMEG00000015529	-	100	71.078	ENSCPBG00000026464	A1CF	100	69.281	Chrysemys_picta_bellii
ENSPMEG00000015529	-	100	69.935	ENSCANG00000038032	A1CF	100	68.464	Colobus_angolensis_palliatus
ENSPMEG00000015529	-	100	69.281	ENSCGRG00001017413	A1cf	100	67.974	Cricetulus_griseus_chok1gshd
ENSPMEG00000015529	-	100	68.627	ENSCGRG00000017332	A1cf	100	67.320	Cricetulus_griseus_crigri
ENSPMEG00000015529	-	100	78.818	ENSCSEG00000002361	a1cf	100	78.990	Cynoglossus_semilaevis
ENSPMEG00000015529	-	100	84.853	ENSCVAG00000010520	a1cf	100	84.853	Cyprinodon_variegatus
ENSPMEG00000015529	-	100	73.693	ENSDARG00000002968	a1cf	100	72.386	Danio_rerio
ENSPMEG00000015529	-	100	69.771	ENSDNOG00000002829	A1CF	100	68.464	Dasypus_novemcinctus
ENSPMEG00000015529	-	80	83.607	ENSETEG00000012527	A1CF	76	83.607	Echinops_telfairi
ENSPMEG00000015529	-	100	69.984	ENSEASG00005012924	A1CF	100	68.515	Equus_asinus_asinus
ENSPMEG00000015529	-	100	69.821	ENSECAG00000010424	A1CF	100	68.352	Equus_caballus
ENSPMEG00000015529	-	77	62.863	ENSEEUG00000000013	A1CF	97	61.853	Erinaceus_europaeus
ENSPMEG00000015529	-	100	74.510	ENSELUG00000003159	a1cf	100	73.529	Esox_lucius
ENSPMEG00000015529	-	100	68.137	ENSFCAG00000011179	A1CF	100	66.993	Felis_catus
ENSPMEG00000015529	-	100	69.935	ENSFALG00000013183	A1CF	100	68.301	Ficedula_albicollis
ENSPMEG00000015529	-	100	68.791	ENSFDAG00000019371	A1CF	100	67.320	Fukomys_damarensis
ENSPMEG00000015529	-	100	77.832	ENSFHEG00000019652	a1cf	96	96.094	Fundulus_heteroclitus
ENSPMEG00000015529	-	100	71.987	ENSGMOG00000018943	a1cf	100	70.847	Gadus_morhua
ENSPMEG00000015529	-	94	69.603	ENSGALG00000003765	A1CF	96	67.876	Gallus_gallus
ENSPMEG00000015529	-	100	81.000	ENSGAFG00000014868	a1cf	100	81.000	Gambusia_affinis
ENSPMEG00000015529	-	100	79.282	ENSGACG00000010241	a1cf	100	78.303	Gasterosteus_aculeatus
ENSPMEG00000015529	-	96	69.676	ENSGAGG00000016508	A1CF	98	67.802	Gopherus_agassizii
ENSPMEG00000015529	-	100	69.771	ENSGGOG00000009670	A1CF	100	68.301	Gorilla_gorilla
ENSPMEG00000015529	-	100	79.739	ENSHBUG00000021959	a1cf	100	79.902	Haplochromis_burtoni
ENSPMEG00000015529	-	100	70.098	ENSHGLG00000008955	A1CF	100	68.137	Heterocephalus_glaber_female
ENSPMEG00000015529	-	100	70.098	ENSHGLG00100000518	A1CF	100	68.137	Heterocephalus_glaber_male
ENSPMEG00000015529	-	100	67.685	ENSHCOG00000017669	a1cf	100	69.614	Hippocampus_comes
ENSPMEG00000015529	-	88	75.646	ENSIPUG00000010367	a1cf	95	74.539	Ictalurus_punctatus
ENSPMEG00000015529	-	100	82.172	ENSKMAG00000006568	a1cf	100	80.065	Kryptolebias_marmoratus
ENSPMEG00000015529	-	99	80.945	ENSLBEG00000020994	a1cf	99	80.782	Labrus_bergylta
ENSPMEG00000015529	-	100	70.752	ENSLACG00000008061	A1CF	100	68.954	Latimeria_chalumnae
ENSPMEG00000015529	-	100	75.490	ENSLOCG00000006302	a1cf	100	73.693	Lepisosteus_oculatus
ENSPMEG00000015529	-	100	70.098	ENSLAFG00000015462	A1CF	100	69.281	Loxodonta_africana
ENSPMEG00000015529	-	100	68.791	ENSMFAG00000035948	A1CF	100	67.320	Macaca_fascicularis
ENSPMEG00000015529	-	100	68.791	ENSMMUG00000007077	A1CF	100	67.320	Macaca_mulatta
ENSPMEG00000015529	-	100	68.791	ENSMNEG00000031454	A1CF	100	67.320	Macaca_nemestrina
ENSPMEG00000015529	-	100	69.771	ENSMLEG00000037223	A1CF	100	68.301	Mandrillus_leucophaeus
ENSPMEG00000015529	-	100	78.862	ENSMAMG00000010402	a1cf	100	77.724	Mastacembelus_armatus
ENSPMEG00000015529	-	100	79.378	ENSMZEG00005013245	a1cf	100	77.651	Maylandia_zebra
ENSPMEG00000015529	-	100	69.821	ENSMGAG00000001507	A1CF	100	68.189	Meleagris_gallopavo
ENSPMEG00000015529	-	100	68.954	ENSMAUG00000007422	A1cf	100	67.810	Mesocricetus_auratus
ENSPMEG00000015529	-	100	68.078	ENSMICG00000003377	A1CF	100	67.427	Microcebus_murinus
ENSPMEG00000015529	-	100	68.954	ENSMOCG00000021536	A1cf	100	67.484	Microtus_ochrogaster
ENSPMEG00000015529	-	100	67.590	ENSMMOG00000009422	a1cf	100	66.612	Mola_mola
ENSPMEG00000015529	-	88	69.982	ENSMODG00000016478	A1CF	97	68.140	Monodelphis_domestica
ENSPMEG00000015529	-	100	73.667	ENSMALG00000012992	a1cf	100	72.500	Monopterus_albus
ENSPMEG00000015529	-	100	69.118	MGP_CAROLIEiJ_G0022873	A1cf	100	67.647	Mus_caroli
ENSPMEG00000015529	-	100	69.118	ENSMUSG00000052595	A1cf	99	71.094	Mus_musculus
ENSPMEG00000015529	-	100	68.464	MGP_PahariEiJ_G0014366	A1cf	100	66.993	Mus_pahari
ENSPMEG00000015529	-	100	68.954	MGP_SPRETEiJ_G0023792	A1cf	100	67.484	Mus_spretus
ENSPMEG00000015529	-	100	64.706	ENSMPUG00000016971	A1CF	100	63.235	Mustela_putorius_furo
ENSPMEG00000015529	-	100	69.608	ENSMLUG00000016071	A1CF	100	68.627	Myotis_lucifugus
ENSPMEG00000015529	-	100	69.935	ENSNGAG00000015136	A1cf	100	68.301	Nannospalax_galili
ENSPMEG00000015529	-	100	80.392	ENSNBRG00000001712	a1cf	100	80.556	Neolamprologus_brichardi
ENSPMEG00000015529	-	100	70.425	ENSNLEG00000012028	A1CF	100	68.954	Nomascus_leucogenys
ENSPMEG00000015529	-	94	68.512	ENSMEUG00000015909	A1CF	100	66.090	Notamacropus_eugenii
ENSPMEG00000015529	-	87	85.149	ENSOPRG00000010667	A1CF	89	85.149	Ochotona_princeps
ENSPMEG00000015529	-	100	80.392	ENSONIG00000019105	a1cf	100	79.739	Oreochromis_niloticus
ENSPMEG00000015529	-	74	70.460	ENSOANG00000007360	A1CF	94	70.022	Ornithorhynchus_anatinus
ENSPMEG00000015529	-	100	67.974	ENSOCUG00000011587	A1CF	100	66.503	Oryctolagus_cuniculus
ENSPMEG00000015529	-	100	77.199	ENSORLG00000013342	a1cf	100	77.398	Oryzias_latipes
ENSPMEG00000015529	-	100	79.675	ENSORLG00020000586	a1cf	100	80.000	Oryzias_latipes_hni
ENSPMEG00000015529	-	100	79.675	ENSORLG00015018569	a1cf	100	80.000	Oryzias_latipes_hsok
ENSPMEG00000015529	-	100	78.502	ENSOMEG00000013531	a1cf	100	78.176	Oryzias_melastigma
ENSPMEG00000015529	-	100	68.791	ENSOGAG00000012884	A1CF	100	68.137	Otolemur_garnettii
ENSPMEG00000015529	-	100	70.588	ENSOARG00000013695	A1CF	100	69.444	Ovis_aries
ENSPMEG00000015529	-	97	67.960	ENSPPAG00000028115	A1CF	99	70.079	Pan_paniscus
ENSPMEG00000015529	-	100	69.281	ENSPPRG00000012180	A1CF	100	68.137	Panthera_pardus
ENSPMEG00000015529	-	100	69.281	ENSPTIG00000021223	A1CF	100	68.137	Panthera_tigris_altaica
ENSPMEG00000015529	-	100	69.771	ENSPTRG00000002508	A1CF	100	68.301	Pan_troglodytes
ENSPMEG00000015529	-	100	68.791	ENSPANG00000021988	A1CF	100	67.320	Papio_anubis
ENSPMEG00000015529	-	100	73.203	ENSPKIG00000025176	a1cf	100	72.222	Paramormyrops_kingsleyae
ENSPMEG00000015529	-	100	69.771	ENSPSIG00000010318	A1CF	100	68.137	Pelodiscus_sinensis
ENSPMEG00000015529	-	98	63.545	ENSPMGG00000013359	a1cf	99	63.184	Periophthalmus_magnuspinnatus
ENSPMEG00000015529	-	100	69.444	ENSPEMG00000015021	A1cf	100	67.974	Peromyscus_maniculatus_bairdii
ENSPMEG00000015529	-	100	68.954	ENSPCIG00000002175	A1CF	100	67.320	Phascolarctos_cinereus
ENSPMEG00000015529	-	100	89.088	ENSPFOG00000007437	-	100	89.088	Poecilia_formosa
ENSPMEG00000015529	-	100	89.414	ENSPFOG00000006683	a1cf	100	89.414	Poecilia_formosa
ENSPMEG00000015529	-	100	87.622	ENSPLAG00000001210	-	100	87.622	Poecilia_latipinna
ENSPMEG00000015529	-	100	87.622	ENSPLAG00000000026	a1cf	100	87.622	Poecilia_latipinna
ENSPMEG00000015529	-	100	88.436	ENSPREG00000016298	a1cf	100	88.436	Poecilia_reticulata
ENSPMEG00000015529	-	100	69.281	ENSPPYG00000002819	A1CF	100	67.810	Pongo_abelii
ENSPMEG00000015529	-	78	93.333	ENSPCAG00000006463	A1CF	70	93.333	Procavia_capensis
ENSPMEG00000015529	-	100	69.118	ENSPCOG00000024172	A1CF	100	68.301	Propithecus_coquereli
ENSPMEG00000015529	-	100	81.373	ENSPNYG00000017944	a1cf	100	81.536	Pundamilia_nyererei
ENSPMEG00000015529	-	100	74.430	ENSPNAG00000007704	a1cf	100	73.616	Pygocentrus_nattereri
ENSPMEG00000015529	-	100	68.464	ENSRNOG00000033195	A1cf	100	66.993	Rattus_norvegicus
ENSPMEG00000015529	-	100	65.139	ENSRBIG00000042892	A1CF	100	64.706	Rhinopithecus_bieti
ENSPMEG00000015529	-	100	69.935	ENSRROG00000041398	A1CF	100	68.464	Rhinopithecus_roxellana
ENSPMEG00000015529	-	100	70.588	ENSSBOG00000021930	A1CF	100	69.118	Saimiri_boliviensis_boliviensis
ENSPMEG00000015529	-	100	69.935	ENSSHAG00000005096	A1CF	100	67.647	Sarcophilus_harrisii
ENSPMEG00000015529	-	100	73.616	ENSSFOG00015011774	a1cf	100	72.964	Scleropages_formosus
ENSPMEG00000015529	-	100	81.997	ENSSMAG00000013271	a1cf	100	81.997	Scophthalmus_maximus
ENSPMEG00000015529	-	100	80.945	ENSSDUG00000013930	a1cf	100	80.619	Seriola_dumerili
ENSPMEG00000015529	-	100	75.083	ENSSLDG00000004290	a1cf	100	75.833	Seriola_lalandi_dorsalis
ENSPMEG00000015529	-	94	87.719	ENSSARG00000005940	A1CF	85	87.719	Sorex_araneus
ENSPMEG00000015529	-	95	69.125	ENSSPUG00000006797	A1CF	95	67.235	Sphenodon_punctatus
ENSPMEG00000015529	-	100	70.588	ENSSSCG00000010431	A1CF	100	69.281	Sus_scrofa
ENSPMEG00000015529	-	100	71.452	ENSTGUG00000005090	A1CF	100	69.984	Taeniopygia_guttata
ENSPMEG00000015529	-	100	79.675	ENSTRUG00000001982	a1cf	100	79.675	Takifugu_rubripes
ENSPMEG00000015529	-	100	78.896	ENSTNIG00000003580	a1cf	100	79.221	Tetraodon_nigroviridis
ENSPMEG00000015529	-	94	64.372	ENSTTRG00000013190	A1CF	94	63.167	Tursiops_truncatus
ENSPMEG00000015529	-	100	68.464	ENSUAMG00000020065	A1CF	100	66.830	Ursus_americanus
ENSPMEG00000015529	-	100	69.118	ENSUMAG00000011162	A1CF	100	67.647	Ursus_maritimus
ENSPMEG00000015529	-	86	64.739	ENSVPAG00000006130	A1CF	86	63.060	Vicugna_pacos
ENSPMEG00000015529	-	100	68.791	ENSVVUG00000002504	A1CF	100	67.157	Vulpes_vulpes
ENSPMEG00000015529	-	100	69.608	ENSXETG00000006611	a1cf	100	68.791	Xenopus_tropicalis
ENSPMEG00000015529	-	100	86.971	ENSXCOG00000003302	a1cf	100	86.319	Xiphophorus_couchianus
ENSPMEG00000015529	-	100	88.274	ENSXMAG00000016703	a1cf	100	87.622	Xiphophorus_maculatus